User: James Ashmore

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513

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RNA-Seq

updated 3.2 years ago by Carlo Yague 8.7k • written 3.2 years ago by James Ashmore ★ 3.4k

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12

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6.1k

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ChIP-Seq Blacklist ENCODE

updated 3.2 years ago by Biostar 20 • written 7.2 years ago by James Ashmore ★ 3.4k

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14

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10k

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ChIP-Seq normalisation paired-end

updated 2.1 years ago by Ram 43k • written 9.2 years ago by James Ashmore ★ 3.4k

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8

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4.4k

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fastq

updated 5.2 years ago by Pierre Lindenbaum 161k • written 5.2 years ago by James Ashmore ★ 3.4k

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2

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2.1k

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RNA-Seq

updated 5.5 years ago by Biostar 20 • written 5.6 years ago by James Ashmore ★ 3.4k

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1.2k

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SNP MNP

6.1 years ago by James Ashmore ★ 3.4k

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1

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1.7k

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limma voom

updated 6.1 years ago by h.mon 35k • written 7.8 years ago by James Ashmore ★ 3.4k

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2

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3.2k

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bwa bowtie2 atac-seq

updated 6.4 years ago by Istvan Albert 100k • written 6.4 years ago by James Ashmore ★ 3.4k

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2

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4.0k

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roc RNA-Seq R

updated 6.5 years ago by Biostar 20 • written 6.7 years ago by James Ashmore ★ 3.4k

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9

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3.0k

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bam pseudo-replicates

updated 6.6 years ago by Istvan Albert 100k • written 6.6 years ago by James Ashmore ★ 3.4k

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2

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2.2k

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ChIP-Seq DiffBind csaw

updated 6.7 years ago by Biostar 20 • written 7.7 years ago by James Ashmore ★ 3.4k

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3.7k

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requests primer python

updated 2.7 years ago by Shaokang • 0 • written 6.7 years ago by James Ashmore ★ 3.4k

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6

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3.4k

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bedGraph

updated 6.7 years ago by GouthamAtla 12k • written 6.7 years ago by James Ashmore ★ 3.4k

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1

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1.7k

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bedtools bedops

updated 6.7 years ago by Biostar 20 • written 6.9 years ago by James Ashmore ★ 3.4k

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3.8k

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featurecounts subread

7.0 years ago by James Ashmore ★ 3.4k

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4

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2.1k

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sam markduplicates

7.1 years ago by James Ashmore ★ 3.4k

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2

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3.0k

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R

7.1 years ago by James Ashmore ★ 3.4k

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4

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4.0k

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bwa bowtie2

7.2 years ago by James Ashmore ★ 3.4k

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1

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2.8k

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csaw ChIP-Seq normalisation edgeR CQN

7.5 years ago by James Ashmore ★ 3.4k

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9

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3.9k

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6 follow

metadata pipeline snakemake make

updated 7.9 years ago by Jeremy Leipzig 22k • written 7.9 years ago by James Ashmore ★ 3.4k

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3

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3.0k

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bioconductor batch-effect

updated 15 days ago by Ram 43k • written 7.9 years ago by James Ashmore ★ 3.4k

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4

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7.3k

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trimming nextera trimmomatic

updated 8.0 years ago by Biostar 20 • written 8.0 years ago by James Ashmore ★ 3.4k

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3

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2.4k

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RNA-Seq R

updated 8.1 years ago by Collin ▴ 1000 • written 8.1 years ago by James Ashmore ★ 3.4k

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2

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1.9k

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regression statistics RNA-seq

updated 13 months ago by Ram 43k • written 8.1 years ago by James Ashmore ★ 3.4k

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5

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7.8k

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ChIP-Seq

updated 21 months ago by Ram 43k • written 8.2 years ago by James Ashmore ★ 3.4k

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1

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6.1k

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ChIP-Seq macs macs2

updated 20 months ago by Ram 43k • written 8.5 years ago by James Ashmore ★ 3.4k

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1

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2.2k

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UCSC MySQL BED

updated 8.6 years ago by Pierre Lindenbaum 161k • written 8.6 years ago by James Ashmore ★ 3.4k

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2

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2.4k

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bed bedtools

updated 19 months ago by Ram 43k • written 8.7 years ago by James Ashmore ★ 3.4k

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5

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4.3k

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normalization DNase-seq

updated 18 months ago by Ram 43k • written 8.8 years ago by James Ashmore ★ 3.4k

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7

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3.5k

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BAM Filtering

updated 15 months ago by Ram 43k • written 9.0 years ago by James Ashmore ★ 3.4k

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2

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3.6k

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bedtools samtools

updated 22 months ago by Ram 43k • written 9.0 years ago by James Ashmore ★ 3.4k

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5

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9.7k

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visualisation ChIP-Seq peaks

updated 2.1 years ago by Ram 43k • written 9.3 years ago by James Ashmore ★ 3.4k

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7

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4.2k

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ChIP-Seq FastQC

updated 2.3 years ago by Ram 43k • written 9.6 years ago by James Ashmore ★ 3.4k

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4

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2.8k

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SOLiD

updated 2.3 years ago by Ram 43k • written 9.6 years ago by James Ashmore ★ 3.4k

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4

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5.8k

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SRA Entrez DamID-seq GEO

updated 2.3 years ago by Ram 43k • written 9.6 years ago by James Ashmore ★ 3.4k