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#Bismark Methylation mapping Error
Bismark0.24 Multicore Methylation
updated 7 months ago by 145k • written 7 months ago by ▴ 50
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0
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401
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Density plot for Quantile and Quartile normalization in geomx workflow
GeoMX workflow
12 months ago by Nai ▴ 50
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0
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941
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Comment: Comment: GEOMX SPATIAL TRANSCRIPTOMICs
17 months ago by Nai ▴ 50
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2
replies
941
views
GEOMX SPATIAL TRANSCRIPTOMICs
NGS transcriptomics ncounter GEOMX
17 months ago by Nai ▴ 50
0
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0
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356
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Haploview Error
plink Haploview vep
17 months ago by Nai ▴ 50
0
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0
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395
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Haploview linkage format .ped and .info file error
plink Haploview vcftools
updated 14 months ago by 44k • written 17 months ago by ▴ 50
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0
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366
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File has zero value indivuals
Haploview
updated 17 months ago by 44k • written 17 months ago by ▴ 50
0
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2
replies
837
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logFC is negative, need help to get it done
Limma R
updated 18 months ago by 20k • written 19 months ago by ▴ 50
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1
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845
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Comment: Comment: Third quartile normalized logFC data to find differentially express gene using l
19 months ago by Nai ▴ 50
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3
replies
845
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Third quartile normalized logFC data to find differentially express gene using limma
Limma R
updated 19 months ago by ★ 2.0k • written 19 months ago by ▴ 50
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0
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687
views
Comment: Comment: Design matrix in limma
19 months ago by Nai ▴ 50
0
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2
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687
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Design matrix in limma
Limma R
19 months ago by Nai ▴ 50
0
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0
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5.6k
views
Comment: Comment: Encountering error when loading scanpy?
updated 19 months ago by 44k • written 19 months ago by ▴ 50
1
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0
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5.6k
views
Comment: Comment: Encountering error when loading scanpy?
19 months ago by Nai ▴ 50
2
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0
replies
5.6k
views
Comment: Comment: Encountering error when loading scanpy?
updated 19 months ago by 44k • written 19 months ago by ▴ 50
0
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1
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1.1k
views
Comment: Comment: Differentially gene expression analysis
19 months ago by Nai ▴ 50
0
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1
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1.1k
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Comment: Comment: Differentially gene expression analysis
19 months ago by Nai ▴ 50
0
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6
replies
1.1k
views
Differentially gene expression analysis
Limma Deseq R
updated 19 months ago by ▴ 40 • written 19 months ago by ▴ 50
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0
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2.0k
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Comment: Comment: Deseq2 dataframematrix error
19 months ago by Nai ▴ 50
0
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0
replies
1.0k
views
Add column in Obs. in anndata using scanpy
scanpy
19 months ago by Nai ▴ 50
9
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4
replies
1.2k
views
Easiest way to design Bioinformatics pipeline
snakeflow python Nextflow
updated 20 months ago by 84k • written 20 months ago by ▴ 50
0
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0
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765
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Comment: Comment: Association of allele in population
21 months ago by Nai ▴ 50
0
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4
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765
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Association of allele in population
Plink
21 months ago by Nai ▴ 50
0
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1
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765
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Comment: Comment: Association of allele in population
21 months ago by Nai ▴ 50
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0
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1.4k
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Comment: Comment: VEP annotated vcf is not readable in bcftools
21 months ago by Nai ▴ 50
0
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1
reply
1.4k
views
Comment: Comment: VEP annotated vcf is not readable in bcftools
21 months ago by Nai ▴ 50
2
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4
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1.4k
views
VEP annotated vcf is not readable in bcftools
bcftools Plink
updated 15 months ago by 44k • written 21 months ago by ▴ 50
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0
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2.6k
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Comment: Comment: VEP annotated VCF conversion into TSV/Text
21 months ago by Nai ▴ 50
0
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1
reply
2.6k
views
Comment: Comment: VEP annotated VCF conversion into TSV/Text
21 months ago by Nai ▴ 50
0
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2
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2.6k
views
Comment: Comment: VEP annotated VCF conversion into TSV/Text
21 months ago by Nai ▴ 50
0
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0
replies
2.6k
views
Comment: Comment: VEP annotated VCF conversion into TSV/Text
21 months ago by Nai ▴ 50
1
vote
9
replies
2.6k
views
VEP annotated VCF conversion into TSV/Text
R bcftools VEP VCF
updated 21 months ago by ▴ 100 • written 21 months ago by ▴ 50
1
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2
replies
936
views
VEP generated VCF file filtering using gnamAD, CADD , dbNSF etc with out loosing sample specific variants.
bcftools vep R VCF
updated 18 months ago by 44k • written 22 months ago by ▴ 50
0
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0
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936
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Answer: Answer: VEP generated VCF file filtering using gnamAD, CADD , dbNSF etc with out loosing
22 months ago by Nai ▴ 50
0
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0
replies
3.3k
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Comment: Comment: Spatial Transcriptomics : Nanostring GeoMx DSP
22 months ago by Nai ▴ 50
0
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1
reply
2.4k
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Comment: Comment: GeoMX NGS RNASeq data analysis
22 months ago by Nai ▴ 50
2
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6
replies
2.4k
views
GeoMX NGS RNASeq data analysis
NGS RNA-Seq GeoMX
updated 22 months ago by 44k • written 22 months ago by ▴ 50
0
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1
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2.4k
views
Comment: Comment: GeoMX NGS RNASeq data analysis
22 months ago by Nai ▴ 50
0
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3
replies
1.1k
views
Hardy-Weinberg equilibrium analysis in Plink for association study.
Plink association study
updated 2.2 years ago by • 0 • written 2.2 years ago by ▴ 50
0
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1
reply
569
views
SPSS : Descriptive analysis cross tabs error
crosstabs SPSS descriptive analysis
updated 2.2 years ago by ★ 28k • written 2.2 years ago by ▴ 50
0
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0
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370
views
SPSS statistics Analysis
quantitative SPSS variable Marker analysis Genotype Clinical
2.2 years ago by Nai ▴ 50
0
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0
replies
947
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Comment: Comment: PLINK CASE-CONTROL ANALYSIS
2.2 years ago by Nai ▴ 50
0
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0
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947
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Comment: Comment: PLINK CASE-CONTROL ANALYSIS
updated 2.2 years ago by 12k • written 2.2 years ago by ▴ 50
2
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4
replies
947
views
PLINK CASE-CONTROL ANALYSIS
PLINK
2.2 years ago by Nai ▴ 50
0
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1
reply
1.1k
views
Comment: Comment: Hardy-Weinberg equilibrium analysis in Plink for association study.
2.2 years ago by Nai ▴ 50
0
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0
replies
3.7k
views
Comment: Comment: Pandas issue: To write multiple csv in loop
2.3 years ago by Nai ▴ 50
0
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0
replies
3.7k
views
Comment: Comment: Pandas issue: To write multiple csv in loop
2.3 years ago by Nai ▴ 50
4
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5
replies
3.7k
views
Pandas issue: To write multiple csv in loop
Pandas Python R
2.3 years ago by Nai ▴ 50
0
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0
replies
383
views
Expression and splicing QTL
eqtl MATRIXEQTL
updated 18 months ago by 44k • written 2.4 years ago by ▴ 50
0
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0
replies
402
views
miRNA prediction using mRNA bam files
miRNA BAM
updated 18 months ago by 44k • written 2.6 years ago by ▴ 50
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