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Comment: C: featureCounts not recognizing paired-end alignment file.. why?
6.3 years ago by dec986 ▴ 370
3
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2
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3.0k
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featureCounts not recognizing paired-end alignment file.. why?
featurecounts RNA-Seq
6.3 years ago by dec986 ▴ 370
4
votes
1
reply
2.8k
views
Cuffcompare output: thousands of novel transcripts
cuffcompare RNA-Seq
updated 6.3 years ago by 87k • written 6.3 years ago by ▴ 370
0
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2
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2.9k
views
Tophat with mm10 gencode
RNA-Seq alignment
updated 20 months ago by 43k • written 8.6 years ago by ▴ 370
14
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5
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6.8k
views
How to repair *all* problems identified by FastQC?
RNA-Seq FastQC
updated 6.4 years ago by 6.0k • written 6.4 years ago by ▴ 370
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0
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1.3k
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Comment: C: how to fix Kmer count from FastQC?
6.4 years ago by dec986 ▴ 370
0
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2
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1.3k
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how to fix Kmer count from FastQC?
fastQC RNA-Seq
updated 6.4 years ago by ▴ 30 • written 6.4 years ago by ▴ 370
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1
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1.7k
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Comment: C: Fastq-Dump Crashes, how to prevent besides continually restarting?
6.4 years ago by dec986 ▴ 370
2
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4
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1.7k
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Fastq-Dump Crashes, how to prevent besides continually restarting?
SRA fastq-dump NCBI
6.4 years ago by dec986 ▴ 370
0
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1
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1.7k
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Comment: C: Solutions to FastQC diagnosis of Micro-Satellites
6.4 years ago by dec986 ▴ 370
0
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1
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1.7k
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Comment: C: Solutions to FastQC diagnosis of Micro-Satellites
6.4 years ago by dec986 ▴ 370
7
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6
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1.7k
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Solutions to FastQC diagnosis of Micro-Satellites
fastqc RNA-Seq
6.4 years ago by dec986 ▴ 370
0
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0
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1.2k
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BiSeq manual giving incompatible objects
R BiSeq
6.5 years ago by dec986 ▴ 370
0
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0
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5.8k
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Comment: C: 'BiocParallel' did not register default BiocParallelParams
6.5 years ago by dec986 ▴ 370
3
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2
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5.8k
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Answer: A: 'BiocParallel' did not register default BiocParallelParams
6.5 years ago by dec986 ▴ 370
5
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9
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5.8k
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'BiocParallel' did not register default BiocParallelParams
software error R
6.5 years ago by dec986 ▴ 370
0
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0
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5.8k
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Comment: C: 'BiocParallel' did not register default BiocParallelParams
6.5 years ago by dec986 ▴ 370
1
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1
reply
5.8k
views
Comment: A: 'BiocParallel' did not register default BiocParallelParams
6.6 years ago by dec986 ▴ 370
0
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0
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1.1k
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Comment: C: Searching Gene Ontology for Known Organs
7.1 years ago by dec986 ▴ 370
4
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3
replies
1.1k
views
Searching Gene Ontology for Known Organs
gene ontology
7.1 years ago by dec986 ▴ 370
10
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4
replies
15k
views
Long Read Length, yet STAR says many reads too short
STAR RNA-Seq single-cell alignment
updated 7.1 years ago by ▴ 560 • written 7.1 years ago by ▴ 370
0
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1
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15k
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Comment: C: Long Read Length, yet STAR says many reads too short
7.1 years ago by dec986 ▴ 370
0
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3
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2.6k
views
Picard MergeBamAlignment failure
picard drop-seq
7.2 years ago by dec986 ▴ 370
0
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1
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2.6k
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Answer: A: Picard MergeBamAlignment failure
7.2 years ago by dec986 ▴ 370
0
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0
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3.0k
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Comment: C: How to get correct options for Picard's AddOrReplaceReadGroups?
7.3 years ago by dec986 ▴ 370
0
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2
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3.0k
views
How to get correct options for Picard's AddOrReplaceReadGroups?
picard
7.3 years ago by dec986 ▴ 370
1
vote
3
replies
2.3k
views
Quantification of Maps to rRNA and mtDNA
rRNA RNA-Seq alignment star mtRNA
updated 7.4 years ago by 104k • written 7.4 years ago by ▴ 370
0
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0
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2.3k
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Comment: C: Quantification of Maps to rRNA and mtDNA
7.4 years ago by dec986 ▴ 370
4
votes
9
replies
3.6k
views
How to plot "normalized read density" vs "insert size"
RNA-Seq
updated 7.4 years ago by 82k • written 7.5 years ago by ▴ 370
0
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0
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6.0k
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Comment: C: STAR aligner fails to produce unmapped file
7.5 years ago by dec986 ▴ 370
6
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4
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6.0k
views
STAR aligner fails to produce unmapped file
STAR
updated 7.5 years ago by 47k • written 7.5 years ago by ▴ 370
0
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0
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3.6k
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Comment: C: How to plot "normalized read density" vs "insert size"
7.5 years ago by dec986 ▴ 370
0
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1
reply
3.6k
views
Comment: C: How to plot "normalized read density" vs "insert size"
7.5 years ago by dec986 ▴ 370
0
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1
reply
3.6k
views
Comment: C: How to plot "normalized read density" vs "insert size"
7.5 years ago by dec986 ▴ 370
0
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0
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12k
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Comment: C: edgeR: no residual df: Cannot estimate dispersion
7.6 years ago by dec986 ▴ 370
5
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2
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12k
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edgeR: no residual df: Cannot estimate dispersion
edgeR
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 370
0
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2
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3.7k
views
Comment: C: Installation of Bcl2Fastq Fails
7.9 years ago by dec986 ▴ 370
0
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7
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3.7k
views
Installation of Bcl2Fastq Fails
bcl2fastq basespace software error illumina
7.9 years ago by dec986 ▴ 370
0
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1
reply
3.7k
views
Comment: A: Installation of Bcl2Fastq Fails
7.9 years ago by dec986 ▴ 370
1
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0
replies
1.7k
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Answer: A: Where Can I download Less Common Genomes?
7.9 years ago by dec986 ▴ 370
6
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3
replies
1.7k
views
Where Can I download Less Common Genomes?
fasta RNA-Seq genome
updated 13 months ago by 43k • written 7.9 years ago by ▴ 370
1
vote
5
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5.0k
views
FeatureCounts Not Reading GTF File Correctly
featureCounts RNA-Seq
7.9 years ago by dec986 ▴ 370
0
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0
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5.0k
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Answer: A: FeatureCounts Not Reading GTF File Correctly
7.9 years ago by dec986 ▴ 370
0
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0
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5.0k
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Comment: C: FeatureCounts Not Reading GTF File Correctly
7.9 years ago by dec986 ▴ 370
0
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1
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5.0k
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Comment: C: FeatureCounts Not Reading GTF File Correctly
7.9 years ago by dec986 ▴ 370
1
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0
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3.1k
views
Answer: A: Alignment with STAR produces unique bam files, but identical output from bedtool
8.0 years ago by dec986 ▴ 370
0
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1
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3.1k
views
Comment: C: Alignment with STAR produces unique bam files, but identical output from bedtool
updated 8.0 years ago by 142k • written 8.0 years ago by ▴ 370
0
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1
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3.1k
views
Comment: C: Alignment with STAR produces unique bam files, but identical output from bedtool
updated 8.0 years ago by 142k • written 8.0 years ago by ▴ 370
0
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2
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3.1k
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Comment: C: Alignment with STAR produces unique bam files, but identical output from bedtool
8.0 years ago by dec986 ▴ 370
0
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1
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3.1k
views
Comment: C: Alignment with STAR produces unique bam files, but identical output from bedtool
8.0 years ago by dec986 ▴ 370
208 results • Page 4 of 5
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