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2
votes
0
replies
128k
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Comment: Comment: How to count fastq reads
2.6 years ago by sacha ★ 2.4k
0
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1
reply
1.0k
views
Comment: Comment: How to extract de novo transcript from RNA long read alignement ?
3.5 years ago by sacha ★ 2.4k
1
vote
3
replies
1.0k
views
How to extract de novo transcript from RNA long read alignement ?
RNA pacbio
updated 3.5 years ago by 8.8k • written 3.5 years ago by ★ 2.4k
3
votes
7
replies
3.3k
views
How can I get the uncompressed size of a BGZIP file ?
bgzip gzip binary
updated 3.3 years ago by ▴ 10 • written 3.9 years ago by ★ 2.4k
0
votes
1
reply
3.3k
views
Comment: C: How can I get the uncompressed size of a BGZIP file ?
3.9 years ago by sacha ★ 2.4k
0
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1
reply
3.3k
views
Comment: C: How can I get the uncompressed size of a BGZIP file ?
3.9 years ago by sacha ★ 2.4k
0
votes
0
replies
12k
views
Answer: A: Get number of variations in a huge VCF using Tabix?
3.9 years ago by sacha ★ 2.4k
1
vote
8
replies
6.2k
views
6 follow
How to plot venn diagram from vcf-compare output ?
vcf-compare venn plot
updated 17 months ago by • 0 • written 7.3 years ago by ★ 2.4k
1
vote
1
reply
8.5k
views
Answer: A: Extract reads with variant at given position
4.2 years ago by sacha ★ 2.4k
0
votes
0
replies
1.6k
views
Comment: C: Call alternative base for each position in a bam file
4.2 years ago by sacha ★ 2.4k
4
votes
3
replies
1.6k
views
Call alternative base for each position in a bam file
bam calling
updated 4.2 years ago by 14k • written 4.2 years ago by ★ 2.4k
2
votes
1
reply
1.0k
views
concordance metrics for exome trio analysis
exome vcf SNP
updated 4.6 years ago by ★ 2.7k • written 4.6 years ago by ★ 2.4k
0
votes
0
replies
3.7k
views
Answer: A: Could you explain the percentage of A, C , G, T in hg19 ?
updated 4.8 years ago by 44k • written 8.7 years ago by ★ 2.4k
0
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1
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3.7k
views
Comment: C: Could you explain the percentage of A, C , G, T in hg19 ?
updated 4.8 years ago by 44k • written 8.7 years ago by ★ 2.4k
0
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1
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3.7k
views
Comment: C: Could you explain the percentage of A, C , G, T in hg19 ?
updated 4.8 years ago by 44k • written 8.7 years ago by ★ 2.4k
0
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1
reply
3.7k
views
Comment: C: Somatic allele frequency from TCGA in non-coding DNA
updated 4.8 years ago by 44k • written 8.7 years ago by ★ 2.4k
1
vote
1
reply
4.5k
views
Answer: A: generate fastq with bed file
updated 4.9 years ago by 44k • written 9.3 years ago by ★ 2.4k
1
vote
1
reply
1.3k
views
Twist Bioscience BAM example
capture bam data twist
updated 4.9 years ago by 20 • written 6.3 years ago by ★ 2.4k
3
votes
1
reply
2.8k
views
Answer: A: How to run dbNSFP_sort.pl to remap coordinates ?
5.0 years ago by sacha ★ 2.4k
2
votes
1
reply
1.2k
views
Is there a benefict of denoising reads for project that are not using 16S amplicon ?
16S denoising illumina amplicon
updated 5.7 years ago by 10k • written 5.7 years ago by ★ 2.4k
1
vote
0
replies
1.3k
views
How can view haplotype from GnomAD
haplotype haploview gnomad
5.7 years ago by sacha ★ 2.4k
1
vote
1
reply
1.0k
views
t-rna gene symbol nomenclature
gene name terminology rna
5.8 years ago by sacha ★ 2.4k
18
votes
11
replies
2.6k
views
8 follow
Forum: Create a File format to store Variant
hgvs json variant
updated 16 months ago by 44k • written 6.3 years ago by ★ 2.4k
5
votes
11
replies
9.4k
views
Extract sequence from fasta using primer
pcr fasta primer extract
updated 5.9 years ago by ▴ 10 • written 8.0 years ago by ★ 2.4k
5
votes
4
replies
1.4k
views
find major transcript from a specific tissue
RNA-Seq database
updated 6.0 years ago by ★ 4.1k • written 6.0 years ago by ★ 2.4k
6
votes
4
replies
1.3k
views
Pipeline for trusight RNA fusion kit
RNA-Seq
updated 6.0 years ago by 8.3k • written 6.0 years ago by ★ 2.4k
0
votes
1
reply
1.3k
views
Comment: C: Pipeline for trusight RNA fusion kit
6.0 years ago by sacha ★ 2.4k
1
vote
5
replies
3.8k
views
Does anybody success to download data using icgc-storage-client ?
icgc
updated 18 months ago by 44k • written 8.6 years ago by ★ 2.4k
1
vote
1
reply
5.9k
views
Comment: C: Dna Pattern Matching In Python for Analysis
6.1 years ago by sacha ★ 2.4k
6
votes
1
reply
5.9k
views
Answer: A: Dna Pattern Matching In Python for Analysis
6.1 years ago by sacha ★ 2.4k
0
votes
0
replies
1.8k
views
Comment: C: Substractive Genomics Analysis
updated 6.1 years ago by 5.3k • written 6.1 years ago by ★ 2.4k
0
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1
reply
2.1k
views
Answer: A: edit headers of fasta files
6.1 years ago by sacha ★ 2.4k
0
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0
replies
2.1k
views
Comment: C: edit headers of fasta files
6.1 years ago by sacha ★ 2.4k
0
votes
0
replies
1.6k
views
Comment: A: Google Dataset Search
6.1 years ago by sacha ★ 2.4k
3
votes
0
replies
15k
views
Answer: A: how to count variants par sample per chromosome in a vcf file?
6.1 years ago by sacha ★ 2.4k
1
vote
0
replies
2.5k
views
Answer: A: Fastest way to process fasta file?
6.1 years ago by sacha ★ 2.4k
4
votes
1
reply
1.8k
views
Answer: A: Substractive Genomics Analysis
6.1 years ago by sacha ★ 2.4k
0
votes
0
replies
1.7k
views
Answer: A: Add string to list of protein sequences in fasta file with different lengh
6.1 years ago by sacha ★ 2.4k
0
votes
0
replies
1.7k
views
Answer: A: Extraction of read subsequences based on a region from a sam file
6.1 years ago by sacha ★ 2.4k
5
votes
0
replies
1.4k
views
Answer: A: What counts as "complex code"?
6.1 years ago by sacha ★ 2.4k
2
votes
0
replies
4.1k
views
Answer: A: Fastq files with integer instead of acii quality scores
6.1 years ago by sacha ★ 2.4k
3
votes
0
replies
2.6k
views
Answer: A: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
6.3 years ago by sacha ★ 2.4k
2
votes
1
reply
8.4k
views
Answer: A: Finding Kmers From Fasta File
6.3 years ago by sacha ★ 2.4k
0
votes
0
replies
2.6k
views
Comment: C: Create a File format to store Variant
6.3 years ago by sacha ★ 2.4k
0
votes
2
replies
2.6k
views
Comment: C: Create a File format to store Variant
6.3 years ago by sacha ★ 2.4k
0
votes
1
reply
1.9k
views
Answer: A: Help finding all allele combinations using Python
6.4 years ago by sacha ★ 2.4k
0
votes
0
replies
1.7k
views
Answer: A: Is there a way to save a specific Gene in IGV of a whole exome sample?
6.4 years ago by sacha ★ 2.4k
1
vote
0
replies
2.0k
views
Answer: A: download human mRNA
6.4 years ago by sacha ★ 2.4k
1
vote
0
replies
3.2k
views
Answer: A: extraction of the 16s rRNA gene from a file containing the genome
6.4 years ago by sacha ★ 2.4k
4
votes
0
replies
4.1k
views
Answer: A: Extracting upstream and Downstream of a Gene based on different intervals
6.4 years ago by sacha ★ 2.4k
255 results • Page 1 of 6
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