Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
1
reply
724
views
With 10x Visum HD : How to map the barcode id to the barcode sequence ?
10x barcode Visium
4 weeks ago by sacha ★ 2.5k
1
vote
0
replies
724
views
Answer: Answer: With 10x Visum HD : How to map the barcode id to the barcode sequence ?
4 weeks ago by sacha ★ 2.5k
2
votes
0
replies
143k
views
Comment: Comment: How to count fastq reads
3.7 years ago by sacha ★ 2.5k
0
votes
1
reply
1.4k
views
Comment: Comment: How to extract de novo transcript from RNA long read alignement ?
4.6 years ago by sacha ★ 2.5k
1
vote
3
replies
1.4k
views
How to extract de novo transcript from RNA long read alignement ?
RNA pacbio
updated 4.6 years ago by 9.3k • written 4.6 years ago by ★ 2.5k
3
votes
7
replies
4.7k
views
How can I get the uncompressed size of a BGZIP file ?
bgzip gzip binary
updated 4.3 years ago by ▴ 10 • written 4.9 years ago by ★ 2.5k
0
votes
1
reply
4.7k
views
Comment: C: How can I get the uncompressed size of a BGZIP file ?
4.9 years ago by sacha ★ 2.5k
0
votes
1
reply
4.7k
views
Comment: C: How can I get the uncompressed size of a BGZIP file ?
4.9 years ago by sacha ★ 2.5k
0
votes
0
replies
15k
views
Answer: A: Get number of variations in a huge VCF using Tabix?
4.9 years ago by sacha ★ 2.5k
1
vote
8
replies
7.0k
views
6 follow
How to plot venn diagram from vcf-compare output ?
vcf-compare venn plot
updated 2.5 years ago by • 0 • written 8.4 years ago by ★ 2.5k
1
vote
1
reply
9.9k
views
Answer: A: Extract reads with variant at given position
5.3 years ago by sacha ★ 2.5k
0
votes
0
replies
2.0k
views
Comment: C: Call alternative base for each position in a bam file
5.3 years ago by sacha ★ 2.5k
4
votes
3
replies
2.0k
views
Call alternative base for each position in a bam file
bam calling
updated 5.3 years ago by 15k • written 5.3 years ago by ★ 2.5k
2
votes
1
reply
1.3k
views
concordance metrics for exome trio analysis
exome vcf SNP
updated 5.7 years ago by ★ 2.7k • written 5.7 years ago by ★ 2.5k
0
votes
0
replies
5.5k
views
Answer: A: Could you explain the percentage of A, C , G, T in hg19 ?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 2.5k
0
votes
1
reply
5.5k
views
Comment: C: Could you explain the percentage of A, C , G, T in hg19 ?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 2.5k
0
votes
1
reply
5.5k
views
Comment: C: Could you explain the percentage of A, C , G, T in hg19 ?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 2.5k
0
votes
1
reply
4.9k
views
Comment: C: Somatic allele frequency from TCGA in non-coding DNA
updated 5.9 years ago by 45k • written 9.8 years ago by ★ 2.5k
1
vote
1
reply
5.0k
views
Answer: A: generate fastq with bed file
updated 6.0 years ago by 45k • written 10.3 years ago by ★ 2.5k
1
vote
1
reply
1.5k
views
Twist Bioscience BAM example
capture bam data twist
updated 6.0 years ago by 20 • written 7.4 years ago by ★ 2.5k
3
votes
1
reply
3.5k
views
Answer: A: How to run dbNSFP_sort.pl to remap coordinates ?
6.1 years ago by sacha ★ 2.5k
2
votes
1
reply
1.6k
views
Is there a benefict of denoising reads for project that are not using 16S amplicon ?
16S denoising illumina amplicon
updated 6.8 years ago by 10k • written 6.8 years ago by ★ 2.5k
1
vote
0
replies
1.5k
views
How can view haplotype from GnomAD
haplotype haploview gnomad
6.8 years ago by sacha ★ 2.5k
1
vote
1
reply
1.3k
views
t-rna gene symbol nomenclature
gene name terminology rna
6.9 years ago by sacha ★ 2.5k
18
votes
11
replies
3.6k
views
8 follow
Forum: Create a File format to store Variant
hgvs json variant
updated 2.4 years ago by 45k • written 7.4 years ago by ★ 2.5k
5
votes
11
replies
11k
views
Extract sequence from fasta using primer
pcr fasta primer extract
updated 7.0 years ago by ▴ 10 • written 9.1 years ago by ★ 2.5k
5
votes
4
replies
1.8k
views
find major transcript from a specific tissue
RNA-Seq database
updated 7.1 years ago by ★ 4.2k • written 7.1 years ago by ★ 2.5k
6
votes
4
replies
1.9k
views
Pipeline for trusight RNA fusion kit
RNA-Seq
updated 7.1 years ago by 8.3k • written 7.1 years ago by ★ 2.5k
0
votes
1
reply
1.9k
views
Comment: C: Pipeline for trusight RNA fusion kit
7.1 years ago by sacha ★ 2.5k
1
vote
5
replies
4.6k
views
Does anybody success to download data using icgc-storage-client ?
icgc
updated 2.6 years ago by 45k • written 9.7 years ago by ★ 2.5k
1
vote
1
reply
7.0k
views
Comment: C: Dna Pattern Matching In Python for Analysis
7.1 years ago by sacha ★ 2.5k
6
votes
1
reply
7.0k
views
Answer: A: Dna Pattern Matching In Python for Analysis
7.1 years ago by sacha ★ 2.5k
0
votes
0
replies
2.5k
views
Comment: C: Substractive Genomics Analysis
updated 7.1 years ago by 5.3k • written 7.2 years ago by ★ 2.5k
0
votes
1
reply
2.6k
views
Answer: A: edit headers of fasta files
7.2 years ago by sacha ★ 2.5k
0
votes
0
replies
2.6k
views
Comment: C: edit headers of fasta files
7.2 years ago by sacha ★ 2.5k
0
votes
0
replies
2.1k
views
Comment: A: Google Dataset Search
7.2 years ago by sacha ★ 2.5k
3
votes
0
replies
18k
views
Answer: A: how to count variants par sample per chromosome in a vcf file?
7.2 years ago by sacha ★ 2.5k
1
vote
0
replies
3.2k
views
Answer: A: Fastest way to process fasta file?
7.2 years ago by sacha ★ 2.5k
4
votes
1
reply
2.5k
views
Answer: A: Substractive Genomics Analysis
7.2 years ago by sacha ★ 2.5k
0
votes
0
replies
2.2k
views
Answer: A: Add string to list of protein sequences in fasta file with different lengh
7.2 years ago by sacha ★ 2.5k
0
votes
0
replies
2.2k
views
Answer: A: Extraction of read subsequences based on a region from a sam file
7.2 years ago by sacha ★ 2.5k
5
votes
0
replies
2.0k
views
Answer: A: What counts as "complex code"?
7.2 years ago by sacha ★ 2.5k
2
votes
0
replies
4.9k
views
Answer: A: Fastq files with integer instead of acii quality scores
7.2 years ago by sacha ★ 2.5k
3
votes
0
replies
3.7k
views
Answer: A: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.3 years ago by sacha ★ 2.5k
2
votes
1
reply
9.2k
views
Answer: A: Finding Kmers From Fasta File
7.3 years ago by sacha ★ 2.5k
0
votes
0
replies
3.6k
views
Comment: C: Create a File format to store Variant
7.4 years ago by sacha ★ 2.5k
0
votes
2
replies
3.6k
views
Comment: C: Create a File format to store Variant
7.4 years ago by sacha ★ 2.5k
0
votes
1
reply
2.5k
views
Answer: A: Help finding all allele combinations using Python
7.4 years ago by sacha ★ 2.5k
0
votes
0
replies
2.3k
views
Answer: A: Is there a way to save a specific Gene in IGV of a whole exome sample?
7.4 years ago by sacha ★ 2.5k
1
vote
0
replies
2.4k
views
Answer: A: download human mRNA
7.4 years ago by sacha ★ 2.5k
257 results • Page 1 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6