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2
votes
5
replies
484
views
minimap2 gets killed, but it doesn't explain why
bowtie2
updated 7 weeks ago by 19k • written 7 weeks ago by ▴ 180
0
votes
0
replies
484
views
Comment: Comment: minimap2 gets killed, but it doesn't explain why
7 weeks ago by michael.flower.14 ▴ 180
0
votes
0
replies
141
views
samsift can't find the AS tag to filter a bam file generated using bowtie2
samsift bowtie2
updated 7 weeks ago by 43k • written 7 weeks ago by ▴ 180
0
votes
1
reply
354
views
Comment: Comment: How do you install ExpansionHunterDenovo on a Mac?
7 weeks ago by michael.flower.14 ▴ 180
0
votes
3
replies
354
views
How do you install ExpansionHunterDenovo on a Mac?
ExpansionHunterDenovo
updated 7 weeks ago by 43k • written 7 weeks ago by ▴ 180
0
votes
2
replies
435
views
anRichment is missing
WGCNA anRichment
updated 7 weeks ago by 43k • written 5 months ago by ▴ 180
0
votes
1
reply
234
views
picard CreateSequenceDictionary errors when trying to make a .dict file
picard dict
updated 8 weeks ago by 6.3k • written 8 weeks ago by ▴ 180
0
votes
1
reply
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
2
votes
14
replies
760
views
jellyfish installed in conda, but 'command not found' when I try to run it
jellyfish conda
updated 8 weeks ago by 21k • written 8 weeks ago by ▴ 180
0
votes
0
replies
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
0
votes
1
reply
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
0
votes
0
replies
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
0
votes
1
reply
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
0
votes
1
reply
760
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
8 weeks ago by michael.flower.14 ▴ 180
0
votes
3
replies
1.5k
views
Consensus sequence calling with normalisation of indels
samtools bcftools consensus
updated 16 months ago by ★ 1.2k • written 2.4 years ago by ▴ 180
9
votes
4
replies
1.3k
views
Inverse of -log(p)
r statistics log-p
updated 16 months ago by 43k • written 21 months ago by ▴ 180
2
votes
2
replies
2.0k
views
Phasing using Beagle with a map file
beagle conda
updated 2.1 years ago by • 0 • written 2.4 years ago by ▴ 180
0
votes
0
replies
434
views
bcftools merged vcf file assigns all variants to one sample
vcf bcftools igv gatk
updated 10 months ago by 43k • written 2.2 years ago by ▴ 180
0
votes
0
replies
1.0k
views
Comment: Comment: gatk CombineGVCFs using argument file with spaces in the path
2.3 years ago by michael.flower.14 ▴ 180
4
votes
5
replies
996
views
Get wget to download only new items from a list
wget linux
updated 2.3 years ago by 43k • written 2.3 years ago by ▴ 180
2
votes
0
replies
996
views
Answer: Answer: Get wget to download only new items from a list
2.3 years ago by michael.flower.14 ▴ 180
1
vote
2
replies
1.0k
views
gatk CombineGVCFs using argument file with spaces in the path
CombineGVCFs spaces gatk
2.3 years ago by michael.flower.14 ▴ 180
7
votes
12
replies
1.9k
views
Screen processes continue to run but can't find the original screen
screen linux
updated 2.3 years ago by ★ 3.2k • written 2.3 years ago by ▴ 180
2
votes
0
replies
1.9k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.3 years ago by michael.flower.14 ▴ 180
10
votes
3
replies
908
views
Basename the contents of a file
basename Linux
updated 2.3 years ago by 21k • written 2.3 years ago by ▴ 180
0
votes
1
reply
996
views
Comment: Comment: Get wget to download only new items from a list
2.3 years ago by michael.flower.14 ▴ 180
0
votes
0
replies
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.6k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.3 years ago by michael.flower.14 ▴ 180
6
votes
10
replies
2.6k
views
Extract a gene region from a whole genome cram file from 1000 genomes
samtools cram bam
2.3 years ago by michael.flower.14 ▴ 180
0
votes
2
replies
1.9k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.3 years ago by michael.flower.14 ▴ 180
0
votes
0
replies
1.9k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
1.9k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.3 years ago by michael.flower.14 ▴ 180
0
votes
0
replies
1.9k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.3 years ago by michael.flower.14 ▴ 180
0
votes
2
replies
1.9k
views
Installing VEP in conda
vep conda
updated 24 months ago by ▴ 150 • written 2.3 years ago by ▴ 180
0
votes
0
replies
4.0k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
2.3 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
1.5k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
updated 2.3 years ago by 161k • written 2.3 years ago by ▴ 180
0
votes
0
replies
1.5k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
2.3 years ago by michael.flower.14 ▴ 180
0
votes
5
replies
1.5k
views
gatk CombineGVCFs output contains only one column of genotypes
combingvcfs gatk
updated 2.3 years ago by 161k • written 2.3 years ago by ▴ 180
0
votes
1
reply
4.0k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
2.3 years ago by michael.flower.14 ▴ 180
6
votes
4
replies
4.0k
views
Combine a directory of GVCF files with gatk CombineGVCFs
gatk combinegvcfs gvcf
2.3 years ago by michael.flower.14 ▴ 180
1
vote
0
replies
2.0k
views
Comment: Comment: Conda failing to install VEP
2.4 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.0k
views
Comment: Comment: Conda failing to install VEP
2.4 years ago by michael.flower.14 ▴ 180
3
votes
3
replies
2.0k
views
Conda failing to install VEP
VEP conda
updated 2.4 years ago by ▴ 490 • written 2.4 years ago by ▴ 180
0
votes
0
replies
2.5k
views
Comment: Comment: Failing to install VEP dependencies
2.4 years ago by michael.flower.14 ▴ 180
0
votes
1
reply
2.5k
views
Comment: Comment: Failing to install VEP dependencies
2.4 years ago by michael.flower.14 ▴ 180
0
votes
0
replies
1.5k
views
Comment: Comment: Padding out a GVCF file with 1000G exomes to get gatk VariantRecalibrator workin
2.4 years ago by michael.flower.14 ▴ 180
115 results • Page 1 of 3
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