Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
8
votes
5
replies
6.8k
views
Combine a directory of GVCF files with gatk CombineGVCFs
gatk combinegvcfs gvcf
updated 8 weeks ago by ★ 4.4k • written 3.8 years ago by ▴ 210
3
votes
6
replies
3.0k
views
6 follow
minimap2 gets killed, but it doesn't explain why
minimap2
updated 4 months ago by 3.4k • written 19 months ago by ▴ 210
0
votes
0
replies
400
views
Demultiplexing asymmetrically barcoded reads from multiplex amplicon nanopore sequencing
ONT demultiplex
7 months ago by michael.flower.14 ▴ 210
0
votes
3
replies
1.1k
views
Install PacBio lima via conda fails
conda
updated 11 months ago by 8.0k • written 11 months ago by ▴ 210
0
votes
0
replies
1.1k
views
Comment: Comment: Install PacBio lima via conda fails
11 months ago by michael.flower.14 ▴ 210
0
votes
1
reply
932
views
Comment: Comment: Filtering reads that map to both references
16 months ago by michael.flower.14 ▴ 210
0
votes
5
replies
932
views
Filtering reads that map to both references
bwa insertion alignment reference
updated 16 months ago by ★ 1.9k • written 16 months ago by ▴ 210
1
vote
6
replies
1.9k
views
anRichment is missing
WGCNA anRichment
updated 17 months ago by 154k • written 22 months ago by ▴ 210
1
vote
1
reply
1.0k
views
WGCNA preservation analysis
WGCNA preservation
updated 17 months ago by 56k • written 17 months ago by ▴ 210
0
votes
0
replies
3.0k
views
Comment: Comment: minimap2 gets killed, but it doesn't explain why
19 months ago by michael.flower.14 ▴ 210
0
votes
1
reply
509
views
samsift can't find the AS tag to filter a bam file generated using bowtie2
samsift bowtie2
updated 16 months ago by 166k • written 19 months ago by ▴ 210
0
votes
1
reply
1.0k
views
Comment: Comment: How do you install ExpansionHunterDenovo on a Mac?
19 months ago by michael.flower.14 ▴ 210
0
votes
3
replies
1.0k
views
How do you install ExpansionHunterDenovo on a Mac?
ExpansionHunterDenovo
updated 19 months ago by 45k • written 19 months ago by ▴ 210
0
votes
1
reply
809
views
picard CreateSequenceDictionary errors when trying to make a .dict file
picard dict
updated 19 months ago by 8.0k • written 19 months ago by ▴ 210
0
votes
1
reply
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
2
votes
14
replies
3.6k
views
jellyfish installed in conda, but 'command not found' when I try to run it
jellyfish conda
updated 19 months ago by 22k • written 19 months ago by ▴ 210
0
votes
0
replies
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
0
votes
0
replies
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.6k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by michael.flower.14 ▴ 210
0
votes
3
replies
2.7k
views
Consensus sequence calling with normalisation of indels
samtools bcftools consensus
updated 2.8 years ago by ★ 1.3k • written 3.8 years ago by ▴ 210
9
votes
4
replies
2.3k
views
Inverse of -log(p)
r statistics log-p
updated 2.8 years ago by 45k • written 3.2 years ago by ▴ 210
2
votes
2
replies
3.2k
views
Phasing using Beagle with a map file
beagle conda
updated 3.5 years ago by • 0 • written 3.9 years ago by ▴ 210
0
votes
0
replies
678
views
bcftools merged vcf file assigns all variants to one sample
vcf bcftools igv gatk
updated 2.3 years ago by 45k • written 3.7 years ago by ▴ 210
0
votes
0
replies
1.5k
views
Comment: Comment: gatk CombineGVCFs using argument file with spaces in the path
3.8 years ago by michael.flower.14 ▴ 210
4
votes
5
replies
1.6k
views
Get wget to download only new items from a list
wget linux
updated 3.8 years ago by 45k • written 3.8 years ago by ▴ 210
2
votes
0
replies
1.6k
views
Answer: Answer: Get wget to download only new items from a list
3.8 years ago by michael.flower.14 ▴ 210
1
vote
2
replies
1.5k
views
gatk CombineGVCFs using argument file with spaces in the path
CombineGVCFs spaces gatk
3.8 years ago by michael.flower.14 ▴ 210
10
votes
12
replies
3.8k
views
Screen processes continue to run but can't find the original screen
screen linux
updated 3.8 years ago by ★ 3.3k • written 3.8 years ago by ▴ 210
3
votes
0
replies
3.8k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.8 years ago by michael.flower.14 ▴ 210
10
votes
3
replies
1.5k
views
Basename the contents of a file
basename Linux
updated 3.8 years ago by 21k • written 3.8 years ago by ▴ 210
0
votes
1
reply
1.6k
views
Comment: Comment: Get wget to download only new items from a list
3.8 years ago by michael.flower.14 ▴ 210
0
votes
0
replies
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.9k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.8 years ago by michael.flower.14 ▴ 210
6
votes
10
replies
3.9k
views
Extract a gene region from a whole genome cram file from 1000 genomes
samtools cram bam
3.8 years ago by michael.flower.14 ▴ 210
0
votes
2
replies
3.8k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.8 years ago by michael.flower.14 ▴ 210
0
votes
0
replies
3.8k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
3.8k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.8 years ago by michael.flower.14 ▴ 210
0
votes
0
replies
3.8k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.8 years ago by michael.flower.14 ▴ 210
0
votes
2
replies
2.4k
views
Installing VEP in conda
vep conda
updated 3.4 years ago by ▴ 210 • written 3.8 years ago by ▴ 210
0
votes
0
replies
6.8k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
3.8 years ago by michael.flower.14 ▴ 210
0
votes
1
reply
2.3k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
updated 3.8 years ago by 166k • written 3.8 years ago by ▴ 210
0
votes
0
replies
2.3k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
3.8 years ago by michael.flower.14 ▴ 210
0
votes
5
replies
2.3k
views
gatk CombineGVCFs output contains only one column of genotypes
combingvcfs gatk
updated 3.8 years ago by 166k • written 3.8 years ago by ▴ 210
0
votes
1
reply
6.8k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
3.8 years ago by michael.flower.14 ▴ 210
121 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6