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0
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1
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755
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Comment: C: Assembly plasmid with tandem repeats of the same insert
21 months ago by David ▴ 210
1
vote
1
reply
755
views
Comment: C: Assembly plasmid with tandem repeats of the same insert
21 months ago by David ▴ 210
2
votes
5
replies
755
views
Assembly plasmid with tandem repeats of the same insert
assembly sequencing
updated 21 months ago by ▴ 340 • written 21 months ago by ▴ 210
0
votes
1
reply
332
views
Deseq2 with continous variable
deseq2
updated 2.1 years ago by 81k • written 2.1 years ago by ▴ 210
1
vote
8
replies
949
views
Remove fungi from human genome assemblies
minimap dnaseq
updated 2.1 years ago by 20 • written 2.3 years ago by ▴ 210
0
votes
0
replies
949
views
Comment: A: Remove fungi from human genome assemblies
2.3 years ago by David ▴ 210
0
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1
reply
949
views
Comment: C: Remove fungi from human genome assemblies
2.3 years ago by David ▴ 210
0
votes
1
reply
949
views
Comment: C: Remove fungi from human genome assemblies
2.3 years ago by David ▴ 210
0
votes
1
reply
949
views
Comment: C: Remove fungi from human genome assemblies
2.3 years ago by David ▴ 210
0
votes
8
replies
3.4k
views
Normalization methods for metagenomics WGS data (not 16S data)
deseq2 edgeR normalization
updated 2.5 years ago by ▴ 40 • written 5.2 years ago by ▴ 210
1
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1
reply
2.4k
views
Answer: A: mummer dot plot
2.8 years ago by David ▴ 210
1
vote
7
replies
2.4k
views
mummer dot plot
mummer dotplot
2.8 years ago by David ▴ 210
0
votes
1
reply
2.4k
views
Answer: A: mummer dot plot
2.8 years ago by David ▴ 210
0
votes
0
replies
942
views
Comment: C: What is the symmetric identity percent
3.1 years ago by David ▴ 210
0
votes
2
replies
942
views
What is the symmetric identity percent
identity genome
3.1 years ago by David ▴ 210
4
votes
8
replies
5.3k
views
Relative abundance fro metagenomics samples
metagenomics bwa taxonomy relative abundance
updated 3.3 years ago by ▴ 150 • written 5.5 years ago by ▴ 210
0
votes
0
replies
824
views
Pathway enrichment analysis bacterial genome
R kegg clusterprofiler david metacyc
updated 3.3 years ago by 20 • written 3.4 years ago by ▴ 210
0
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1
reply
1.3k
views
Comment: C: haplotypeCaller groups comparison
3.4 years ago by David ▴ 210
0
votes
3
replies
1.3k
views
haplotypeCaller groups comparison
gatk
3.4 years ago by David ▴ 210
1
vote
1
reply
545
views
Answer: A: Identify deletion in multiple bam files compared to the same bacterial reference
updated 3.4 years ago by 36k • written 3.4 years ago by ▴ 210
2
votes
3
replies
545
views
Identify deletion in multiple bam files compared to the same bacterial reference
bedtools bam
3.4 years ago by David ▴ 210
0
votes
0
replies
2.0k
views
Comment: C: IGV alignment explanation
3.4 years ago by David ▴ 210
0
votes
2
replies
2.0k
views
IGV alignment explanation
igv bam
updated 3.4 years ago by 34k • written 3.4 years ago by ▴ 210
0
votes
0
replies
1.8k
views
Comment: C: Gene coverage from Bam files
3.5 years ago by David ▴ 210
1
vote
2
replies
1.8k
views
Gene coverage from Bam files
bedtools
updated 3.5 years ago by 15k • written 3.5 years ago by ▴ 210
0
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0
replies
5.3k
views
Comment: C: Relative abundance fro metagenomics samples
3.5 years ago by David ▴ 210
0
votes
0
replies
936
views
Answer: A: Compare samples from bacterial genome
3.6 years ago by David ▴ 210
2
votes
5
replies
936
views
Compare samples from bacterial genome
deseq metagenomics
3.6 years ago by David ▴ 210
0
votes
1
reply
936
views
Comment: C: Compare samples from bacterial genome
3.6 years ago by David ▴ 210
0
votes
1
reply
3.6k
views
Comment: C: Featurecounts normalize by gene length
3.6 years ago by David ▴ 210
0
votes
1
reply
3.6k
views
Comment: C: Featurecounts normalize by gene length
3.6 years ago by David ▴ 210
3
votes
5
replies
3.6k
views
Featurecounts normalize by gene length
featureCount tpm deseq2
3.6 years ago by David ▴ 210
0
votes
1
reply
1.1k
views
Comment: C: bedcoverage output while looking for missing genes
4.2 years ago by David ▴ 210
1
vote
3
replies
1.1k
views
bedcoverage output while looking for missing genes
bedtools
updated 4.2 years ago by 81k • written 4.2 years ago by ▴ 210
3
votes
4
replies
2.8k
views
Get length of the alignment from bam file
bam
updated 4.2 years ago by 146k • written 4.2 years ago by ▴ 210
0
votes
0
replies
2.8k
views
Comment: C: Get length of the alignment from bam file
4.2 years ago by David ▴ 210
0
votes
0
replies
4.1k
views
Comment: C: How to get percent identity from bam file ?
4.3 years ago by David ▴ 210
0
votes
1
reply
4.1k
views
Comment: C: How to get percent identity from bam file ?
4.3 years ago by David ▴ 210
4
votes
9
replies
4.1k
views
How to get percent identity from bam file ?
bwa bam samtools
4.3 years ago by David ▴ 210
0
votes
2
replies
4.1k
views
Comment: A: How to get percent identity from bam file ?
4.3 years ago by David ▴ 210
0
votes
0
replies
1.6k
views
Comment: C: Cannot align reads to plasmid
4.4 years ago by David ▴ 210
0
votes
3
replies
1.6k
views
Cannot align reads to plasmid
sequencing bwa
updated 4.4 years ago by 34k • written 4.4 years ago by ▴ 210
0
votes
1
reply
1.5k
views
Comment: A: Insert size on PE 2*250
4.4 years ago by David ▴ 210
0
votes
3
replies
1.5k
views
Insert size on PE 2*250
sequencing
4.4 years ago by David ▴ 210
0
votes
1
reply
1.1k
views
slurm and CfnCluster auto-scaling
sequence alignment
updated 4.5 years ago by 20 • written 4.5 years ago by ▴ 210
3
votes
12
replies
1.9k
views
How to reduce cross mapping alignments with paired-end reads ?
bwa genome dnaseq
4.8 years ago by David ▴ 210
0
votes
1
reply
1.9k
views
Comment: C: How to reduce false positive whan aligning paired-end reads ?
4.8 years ago by David ▴ 210
0
votes
1
reply
1.9k
views
Answer: A: How to reduce false positive whan aligning paired-end reads ?
4.8 years ago by David ▴ 210
1
vote
1
reply
1.9k
views
Comment: C: How to reduce false positive whan aligning paired-end reads ?
4.8 years ago by David ▴ 210
0
votes
0
replies
1.9k
views
Comment: C: How to reduce false positive whan aligning paired-end reads ?
4.8 years ago by David ▴ 210
98 results • Page 1 of 2
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