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0
votes
1
reply
199
views
Normalization strategies for comparing mapped reads across samples in RNA-seq
normalization
rnaseq
updated 20 days ago by
Ram
43k • written 20 days ago by
Picasa
▴ 640
1
vote
1
reply
194
views
Seeking for edgeR TMM Normalization calcul example
tmm
edgeR
deseq2
updated 28 days ago by
jared.andrews07
★ 16k • written 28 days ago by
Picasa
▴ 640
0
votes
0
replies
636
views
Comment:
Comment: Filter out doublet and Clustering
6 weeks ago by
Picasa
▴ 640
0
votes
1
reply
360
views
Comment:
Comment: GO enrichment plot with dotplot strange axis
10 weeks ago by
Picasa
▴ 640
0
votes
3
replies
360
views
GO enrichment plot with dotplot strange axis
enrichment
go
plot
updated 10 weeks ago by
bk11
★ 2.3k • written 10 weeks ago by
Picasa
▴ 640
0
votes
0
replies
43k
views
Comment:
Comment: ClusterProfiler : What is GeneRatio and BgRatio?
11 weeks ago by
Picasa
▴ 640
0
votes
1
reply
442
views
Seurat: How to get all genes name of a cell ?
seurat
updated 10 months ago by
jv
★ 1.8k • written 10 months ago by
Picasa
▴ 640
0
votes
0
replies
10k
views
Comment:
Comment: DESeq2 modelling and Wald's test
10 months ago by
Picasa
▴ 640
0
votes
1
reply
521
views
DESeq2 : parameter of Negative Binomial model in a context of gene expression
rnaseq
DESeq2
NB
11 months ago by
Picasa
▴ 640
2
votes
11
replies
6.2k
views
7 follow
PCA on VCF
pca
vcf
updated 20 months ago by
Jeremy Leipzig
22k • written 8.0 years ago by
Picasa
▴ 640
0
votes
6
replies
4.2k
views
Merging vcf files ?
vcf
updated 22 months ago by
fotaye7734
• 0 • written 7.8 years ago by
Picasa
▴ 640
0
votes
1
reply
840
views
Comment:
Comment: Alignment of genomes and get statistics about alignment
2.5 years ago by
Picasa
▴ 640
0
votes
3
replies
840
views
Alignment of genomes and get statistics about alignment
genome
updated 2.5 years ago by
manaswwm
▴ 490 • written 2.5 years ago by
Picasa
▴ 640
2
votes
2
replies
735
views
Primers and multimapping ?
primer3
updated 2.6 years ago by
ATpoint
81k • written 2.6 years ago by
Picasa
▴ 640
2
votes
1
reply
781
views
R package for structural variation representation ?
structural
variation
mummer
updated 2.6 years ago by
benformatics
3.9k • written 2.6 years ago by
Picasa
▴ 640
0
votes
0
replies
4.8k
views
Comment:
Comment: repeatmasker species setting
2.7 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
Comment: gene set filter/selection for training ab initio annotation tools
2.8 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
Comment: gene set filter/selection for training ab initio annotation tools
2.8 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
Comment: gene set filter/selection for training ab initio annotation tools
2.8 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
Comment: gene set filter/selection for training ab initio annotation tools
2.8 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
Comment: gene set filter/selection for training ab initio annotation tools
2.8 years ago by
Picasa
▴ 640
2
votes
7
replies
3.2k
views
Using RNA seq for genome annotation
maker
annotation
updated 2.9 years ago by
Istvan Albert
100k • written 6.9 years ago by
Picasa
▴ 640
0
votes
0
replies
500
views
Phased SNPs with single rad seq data ?
snp
rad
single
3.0 years ago by
Picasa
▴ 640
0
votes
0
replies
647
views
Alternative free software for recombination rate estimation ?
radseq
joinmap
stacks
3.0 years ago by
Picasa
▴ 640
0
votes
0
replies
985
views
Tools for .hic file visualization
juicer
3d-dna
hic
3.1 years ago by
Picasa
▴ 640
0
votes
1
reply
3.7k
views
Comment:
C: Using HiCanu assembler on PacBio Hifi reads
3.3 years ago by
Picasa
▴ 640
0
votes
1
reply
800
views
Assessing collapsed assembly ?
Assembly
paralogue
collapsing
updated 3.8 years ago by
colindaven
6.3k • written 3.8 years ago by
Picasa
▴ 640
0
votes
1
reply
9.5k
views
Comment:
C: Create de novo repeat library
3.8 years ago by
Picasa
▴ 640
0
votes
1
reply
9.5k
views
Comment:
C: Create de novo repeat library
3.8 years ago by
Picasa
▴ 640
0
votes
1
reply
13k
views
Comment:
C: RAxML outputs: which one I have to take ?
3.9 years ago by
Picasa
▴ 640
0
votes
1
reply
3.0k
views
Comment:
C: ONT fast5 basecalling
3.9 years ago by
Picasa
▴ 640
0
votes
0
replies
1.2k
views
Comment:
C: Best way for phylogenetic tree with missing data
3.9 years ago by
Picasa
▴ 640
0
votes
0
replies
21k
views
Comment:
C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
3.9 years ago by
Picasa
▴ 640
0
votes
1
reply
1.2k
views
Comment:
C: Best way for phylogenetic tree with missing data
3.9 years ago by
Picasa
▴ 640
2
votes
5
replies
1.2k
views
Best way for phylogenetic tree with missing data
phylogenetic tree
updated 3.9 years ago by
Mensur Dlakic
★ 27k • written 3.9 years ago by
Picasa
▴ 640
0
votes
1
reply
1.4k
views
Comment:
C: Transcript or cds for phylogenetic tree ?
3.9 years ago by
Picasa
▴ 640
3
votes
3
replies
1.4k
views
Transcript or cds for phylogenetic tree ?
msa
phylogenetic
updated 3.9 years ago by
lieven.sterck
15k • written 3.9 years ago by
Picasa
▴ 640
1
vote
0
replies
606
views
Subset long reads and optimal coverage
long reads
Assembly
updated 3.9 years ago by
Biostar
20 • written 4.0 years ago by
Picasa
▴ 640
0
votes
1
reply
2.5k
views
Comment:
C: Workflow for structural variants from long read sequencing data
3.9 years ago by
Picasa
▴ 640
0
votes
0
replies
1.0k
views
Comment:
C: Structural variation germline vs somatic ?
4.0 years ago by
Picasa
▴ 640
0
votes
0
replies
1.0k
views
Comment:
C: Structural variation germline vs somatic ?
4.0 years ago by
Picasa
▴ 640
3
votes
4
replies
1.0k
views
Structural variation germline vs somatic ?
structural variation
germline
somatic
updated 4.0 years ago by
metinyazar88
▴ 10 • written 4.0 years ago by
Picasa
▴ 640
0
votes
1
reply
856
views
Comment:
C: How to get Gene ID from NCBI accession for non model species ?
4.0 years ago by
Picasa
▴ 640
2
votes
3
replies
856
views
How to get Gene ID from NCBI accession for non model species ?
gene id
ncbi
accession
updated 4.0 years ago by
GenoMax
141k • written 4.0 years ago by
Picasa
▴ 640
0
votes
1
reply
1.4k
views
Comment:
C: RepeatMasker overlap and interpretation
4.1 years ago by
Picasa
▴ 640
6
votes
6
replies
1.3k
views
Where to upload protein coding gene annotation ?
maker
protein
updated 4.1 years ago by
Juke34
8.5k • written 4.1 years ago by
Picasa
▴ 640
0
votes
3
replies
1.4k
views
RepeatMasker overlap and interpretation
repeat
overlap
updated 4.1 years ago by
lieven.sterck
15k • written 4.1 years ago by
Picasa
▴ 640
1
vote
3
replies
876
views
Contig longer than mitochondrial sequence. Explanation ?
mitochondrial
contig
updated 4.2 years ago by
vmicrobio
▴ 290 • written 4.2 years ago by
Picasa
▴ 640
0
votes
1
reply
830
views
hi-c coverage for scaffolding
hi c
scaffold
Assembly
4.2 years ago by
Picasa
▴ 640
0
votes
1
reply
6.7k
views
Comment:
C: gene set filter/selection for training ab initio annotation tools
4.3 years ago by
Picasa
▴ 640
326 results • Page
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