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0
votes
6
replies
3.4k
views
Merging vcf files ?
vcf
updated 17 days ago by • 0 • written 6.0 years ago by ▴ 610
0
votes
1
reply
440
views
Comment: Comment: Alignment of genomes and get statistics about alignment
8 months ago by Picasa ▴ 610
0
votes
3
replies
440
views
Alignment of genomes and get statistics about alignment
genome
updated 8 months ago by ▴ 260 • written 8 months ago by ▴ 610
2
votes
2
replies
376
views
Primers and multimapping ?
primer3
updated 9 months ago by 62k • written 9 months ago by ▴ 610
2
votes
1
reply
414
views
R package for structural variation representation ?
structural variation mummer
updated 10 months ago by ★ 2.9k • written 10 months ago by ▴ 610
0
votes
0
replies
3.0k
views
Comment: Comment: repeatmasker species setting
10 months ago by Picasa ▴ 610
0
votes
0
replies
3.2k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
11 months ago by Picasa ▴ 610
0
votes
1
reply
3.2k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
12 months ago by Picasa ▴ 610
0
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1
reply
3.2k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
12 months ago by Picasa ▴ 610
0
votes
1
reply
3.2k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
12 months ago by Picasa ▴ 610
0
votes
1
reply
3.2k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
12 months ago by Picasa ▴ 610
2
votes
7
replies
2.5k
views
Using RNA seq for genome annotation
maker annotation
updated 13 months ago by 93k • written 5.1 years ago by ▴ 610
0
votes
0
replies
215
views
Phased SNPs with single rad seq data ?
snp rad single
14 months ago by Picasa ▴ 610
0
votes
0
replies
336
views
Alternative free software for recombination rate estimation ?
radseq joinmap stacks
14 months ago by Picasa ▴ 610
0
votes
0
replies
625
views
Tools for .hic file visualization
juicer 3d-dna hic
16 months ago by Picasa ▴ 610
0
votes
1
reply
2.4k
views
Comment: C: Using HiCanu assembler on PacBio Hifi reads
18 months ago by Picasa ▴ 610
0
votes
1
reply
408
views
Assessing collapsed assembly ?
Assembly paralogue collapsing
updated 2.0 years ago by ★ 3.9k • written 2.0 years ago by ▴ 610
0
votes
1
reply
5.3k
views
Comment: C: Create de novo repeat library
2.0 years ago by Picasa ▴ 610
0
votes
1
reply
5.3k
views
Comment: C: Create de novo repeat library
2.0 years ago by Picasa ▴ 610
0
votes
0
replies
9.7k
views
Comment: C: RAxML outputs: which one I have to take ?
2.1 years ago by Picasa ▴ 610
0
votes
1
reply
2.1k
views
Comment: C: ONT fast5 basecalling
2.1 years ago by Picasa ▴ 610
0
votes
0
replies
701
views
Comment: C: Best way for phylogenetic tree with missing data
2.1 years ago by Picasa ▴ 610
0
votes
0
replies
17k
views
Comment: C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
2.1 years ago by Picasa ▴ 610
0
votes
1
reply
701
views
Comment: C: Best way for phylogenetic tree with missing data
2.1 years ago by Picasa ▴ 610
2
votes
5
replies
701
views
Best way for phylogenetic tree with missing data
phylogenetic tree
updated 2.1 years ago by ★ 20k • written 2.1 years ago by ▴ 610
0
votes
1
reply
831
views
Comment: C: Transcript or cds for phylogenetic tree ?
2.1 years ago by Picasa ▴ 610
3
votes
3
replies
831
views
Transcript or cds for phylogenetic tree ?
msa phylogenetic
updated 2.1 years ago by 14k • written 2.1 years ago by ▴ 610
1
vote
0
replies
385
views
Subset long reads and optimal coverage
long reads Assembly
updated 2.1 years ago by 20 • written 2.2 years ago by ▴ 610
0
votes
1
reply
1.9k
views
Comment: C: Workflow for structural variants from long read sequencing data
2.1 years ago by Picasa ▴ 610
0
votes
0
replies
630
views
Comment: C: Structural variation germline vs somatic ?
2.2 years ago by Picasa ▴ 610
0
votes
0
replies
630
views
Comment: C: Structural variation germline vs somatic ?
2.2 years ago by Picasa ▴ 610
3
votes
4
replies
630
views
Structural variation germline vs somatic ?
structural variation germline somatic
updated 2.2 years ago by ▴ 10 • written 2.2 years ago by ▴ 610
0
votes
1
reply
545
views
Comment: C: How to get Gene ID from NCBI accession for non model species ?
2.2 years ago by Picasa ▴ 610
2
votes
3
replies
545
views
How to get Gene ID from NCBI accession for non model species ?
gene id ncbi accession
updated 2.2 years ago by 117k • written 2.2 years ago by ▴ 610
0
votes
1
reply
765
views
Comment: C: RepeatMasker overlap and interpretation
2.3 years ago by Picasa ▴ 610
3
votes
6
replies
695
views
Where to upload protein coding gene annotation ?
maker protein
updated 2.3 years ago by ★ 7.1k • written 2.3 years ago by ▴ 610
0
votes
3
replies
765
views
RepeatMasker overlap and interpretation
repeat overlap
updated 2.3 years ago by 14k • written 2.3 years ago by ▴ 610
1
vote
3
replies
522
views
Contig longer than mitochondrial sequence. Explanation ?
mitochondrial contig
updated 2.4 years ago by ▴ 290 • written 2.4 years ago by ▴ 610
0
votes
1
reply
570
views
hi-c coverage for scaffolding
hi c scaffold Assembly
2.4 years ago by Picasa ▴ 610
0
votes
1
reply
3.2k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
2.5 years ago by Picasa ▴ 610
0
votes
1
reply
546
views
SnpEff database with maker annotation format
maker snpeff
updated 2.6 years ago by ▴ 70 • written 2.6 years ago by ▴ 610
1
vote
0
replies
917
views
Comment: C: Extract genes from GTF with variants from VCF
2.6 years ago by Picasa ▴ 610
0
votes
1
reply
917
views
Comment: C: Extract genes from GTF with variants from VCF
2.6 years ago by Picasa ▴ 610
1
vote
4
replies
917
views
Extract genes from GTF with variants from VCF
gtf variants
2.6 years ago by Picasa ▴ 610
0
votes
1
reply
824
views
Comment: C: Get counts for allele specific expression analysis
2.7 years ago by Picasa ▴ 610
1
vote
4
replies
824
views
Get counts for allele specific expression analysis
RNA-Seq allele expression ase-tigar
2.7 years ago by Picasa ▴ 610
0
votes
0
replies
16k
views
Comment: C: Recommendations For Heterozygous Genome Assembly Software
updated 2.7 years ago by 36k • written 6.0 years ago by ▴ 610
0
votes
0
replies
1.5k
views
Comment: C: Scaffolding a genome with long reads.
2.7 years ago by Picasa ▴ 610
5
votes
7
replies
1.5k
views
Scaffolding a genome with long reads.
assembly long reads pacbio
updated 2.7 years ago by 14k • written 2.7 years ago by ▴ 610
2
votes
1
reply
2.1k
views
Option -categorize in SNAP gene prediction.
annotation snap maker
updated 2.7 years ago by 20 • written 5.7 years ago by ▴ 610
317 results • Page 1 of 7
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