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0
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42k
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Comment: C: How to extract unique mapped results from Bowtie2 bam results?
9.9 years ago by Varun Gupta ★ 1.3k
1
vote
2
replies
4.2k
views
Viewing Tf Binding Chip Seq Data From Encode On Igv
igv
updated 10.0 years ago by 11k • written 10.1 years ago by ★ 1.3k
0
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3
replies
13k
views
padj value in DEseq package
RNA-Seq DEseq
updated 2.6 years ago by 43k • written 10.0 years ago by ★ 1.3k
0
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0
replies
2.7k
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Comment: C: Rpkm Computation
10.1 years ago by Varun Gupta ★ 1.3k
0
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1
reply
25k
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Comment: C: Bwa Mem -M Option
10.1 years ago by Varun Gupta ★ 1.3k
26
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9
replies
11k
views
Bowtie Vs Bwa For Indels
bowtie bwa
updated 10.1 years ago by 33k • written 10.1 years ago by ★ 1.3k
0
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1
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11k
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Comment: C: Bowtie Vs Bwa For Indels
10.1 years ago by Varun Gupta ★ 1.3k
0
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0
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16k
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Comment: C: In Cigar String, What Is The Difference Between 'N' And 'D' ?
10.1 years ago by Varun Gupta ★ 1.3k
0
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1
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4.6k
views
Comment: C: Rna Seq Short Rna Alignment With Rsubread Package In R
10.1 years ago by Varun Gupta ★ 1.3k
13
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12
replies
8.5k
views
7 follow
Fastqc To Check The Quality Of High Throughput Sequence
fastqc illumina rna-seq
updated 2.1 years ago by 43k • written 11.9 years ago by ★ 1.3k
0
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1
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2.3k
views
Hmmsplicer Junctions
hmm
updated 10.3 years ago by • 0 • written 11.9 years ago by ★ 1.3k
0
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1
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9.7k
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Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
0
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1
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9.7k
views
Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
0
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1
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9.7k
views
Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
0
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1
reply
9.7k
views
Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
9.7k
views
Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
9.7k
views
Comment: C: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
10.3 years ago by Varun Gupta ★ 1.3k
3
votes
0
replies
23k
views
Answer: A: Understanding Fastqc Output- Please Help
10.3 years ago by Varun Gupta ★ 1.3k
3
votes
9
replies
11k
views
Genomecoveragebed - Bedtool For Reporting Per Base Genome Coverage
bedtools coverage
updated 10.3 years ago by • 0 • written 12.2 years ago by ★ 1.3k
0
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1
reply
9.7k
views
Answer: Answer: Is They Any Software Or Technique To Find The Number Of Reads Mapped To Each Con
updated 14 months ago by 43k • written 10.3 years ago by ★ 1.3k
6
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1
reply
9.7k
views
Answer: A: Help With Perl Script: Store Fasta Sequences Into A Hash.
10.3 years ago by Varun Gupta ★ 1.3k
0
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1
reply
12k
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Comment: C: How To Understand The Encoding And Trim Their Adapters
10.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
4.2k
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Answer: A: What Will Happen If One Read Can Map To Two Regions?
10.3 years ago by Varun Gupta ★ 1.3k
0
votes
3
replies
3.8k
views
Seed Search Of Pattern Sequence In A Given Fasta File Database
search
updated 10.3 years ago by ★ 1.9k • written 10.3 years ago by ★ 1.3k
5
votes
8
replies
5.6k
views
7 follow
Htseq Count Sam
htseq counts
updated 10.5 years ago by ★ 7.8k • written 12.1 years ago by ★ 1.3k
8
votes
4
replies
3.2k
views
Pombe Intron Locations
intron coordinates
updated 10.6 years ago by 20 • written 12.2 years ago by ★ 1.3k
2
votes
7
replies
3.6k
views
Can I Use The Gatk Snp Calling On Sam Files With Missing Quality Values
gatk
updated 10.6 years ago by 20 • written 10.7 years ago by ★ 1.3k
0
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1
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4.3k
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Comment: C: Plot Read Count Over Exons For A Gene
10.7 years ago by Varun Gupta ★ 1.3k
0
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0
replies
3.6k
views
Comment: C: Can I Use The Gatk Snp Calling On Sam Files With Missing Quality Values
10.7 years ago by Varun Gupta ★ 1.3k
0
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1
reply
3.6k
views
Comment: C: Can I Use The Gatk Snp Calling On Sam Files With Missing Quality Values
10.7 years ago by Varun Gupta ★ 1.3k
0
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1
reply
3.6k
views
Comment: C: Can I Use The Gatk Snp Calling On Sam Files With Missing Quality Values
10.7 years ago by Varun Gupta ★ 1.3k
0
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1
reply
4.3k
views
Comment: C: Plot Read Count Over Exons For A Gene
10.8 years ago by Varun Gupta ★ 1.3k
31
votes
9
replies
21k
views
7 follow
Genotype Likelihoods
genotype
updated 10.8 years ago by ▴ 700 • written 10.8 years ago by ★ 1.3k
4
votes
4
replies
7.2k
views
Finding Snps From A Bam File
snps
updated 10.9 years ago by 161k • written 10.9 years ago by ★ 1.3k
2
votes
0
replies
38k
views
Comment: C: How To Get Mapping Statistics On Bam File
11.0 years ago by Varun Gupta ★ 1.3k
2
votes
4
replies
5.8k
views
Removing Reads Which Have Adapter Sequences
adaptor
updated 11.1 years ago by ▴ 830 • written 11.1 years ago by ★ 1.3k
0
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1
reply
5.8k
views
Comment: C: Removing Reads Which Have Adapter Sequences
11.1 years ago by Varun Gupta ★ 1.3k
9
votes
6
replies
6.9k
views
Upregulated And Downregulated Genes
differential expression
updated 11.1 years ago by ★ 1.3k • written 11.1 years ago by ★ 1.3k
0
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1
reply
6.9k
views
Comment: C: Upregulated And Downregulated Genes
11.1 years ago by Varun Gupta ★ 1.3k
6
votes
4
replies
15k
views
Bowtie For Rna Seq Data
bowtie
updated 11.2 years ago by 33k • written 11.2 years ago by ★ 1.3k
0
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1
reply
15k
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Comment: C: Bowtie For Rna Seq Data
11.2 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
7.4k
views
Comment: C: Which Program Should I Test To Map Rnaseq Data? Did Anybody Tried Gsnap?
11.2 years ago by Varun Gupta ★ 1.3k
1
vote
4
replies
3.7k
views
Differences In The Read Mapping Percentages When Using Bowtie And Gsnap
bowtie mapping
updated 11.3 years ago by 100k • written 11.3 years ago by ★ 1.3k
0
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1
reply
33k
views
Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
11.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
33k
views
Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
11.3 years ago by Varun Gupta ★ 1.3k
0
votes
0
replies
33k
views
Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
11.3 years ago by Varun Gupta ★ 1.3k
0
votes
0
replies
3.7k
views
Comment: C: Differences In The Read Mapping Percentages When Using Bowtie And Gsnap
11.3 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
2.7k
views
Comment: C: Bowtie1 Gapped Alignment
11.3 years ago by Varun Gupta ★ 1.3k
6
votes
2
replies
10k
views
Tophat Junctions.Bed File
tophat
updated 13 months ago by 43k • written 12.0 years ago by ★ 1.3k
0
votes
1
reply
2.7k
views
Comment: C: Bowtie1 Gapped Alignment
11.3 years ago by Varun Gupta ★ 1.3k
215 results • Page 3 of 5
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