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Comment: Comment: FastQC command line usage
15 months ago by nkabo ▴ 60
0
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1
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7.1k
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Answer: Answer: FastQC command line usage
15 months ago by nkabo ▴ 60
0
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0
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533
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Comment: Comment: Joint genotyping for somatic variants by using unrelated samples
15 months ago by nkabo ▴ 60
3
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3
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533
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Joint genotyping for somatic variants by using unrelated samples
variantanalysis NGS WES WGS
15 months ago by nkabo ▴ 60
1
vote
1
reply
408
views
Calculation of tRNA abundances from different cell types
abundance Transcript tRNA bulk RNA-Seq
updated 20 months ago by 12k • written 20 months ago by ▴ 60
0
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0
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997
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Comment: Comment: How to detect which Ensembl transcript ID corresponds to tRNAs
20 months ago by nkabo ▴ 60
0
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1
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997
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Comment: Comment: How to detect which Ensembl transcript ID corresponds to tRNAs
20 months ago by nkabo ▴ 60
6
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6
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997
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How to detect which Ensembl transcript ID corresponds to tRNAs
RNA-Seq Annotation Ensembl tRNA
updated 20 months ago by 23k • written 20 months ago by ▴ 60
0
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0
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1.0k
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Answer: Answer: any pipeline for small non coding RNA analysis from total RNA-seq
2.2 years ago by nkabo ▴ 60
0
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0
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325
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How to find trusted healthy control data for childhood disorders
RNA-seq Rarediseases Peripheralblood
2.2 years ago by nkabo ▴ 60
0
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0
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693
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Comment: C: How to obtain unspliced tRNAs from FASTQ file
2.4 years ago by nkabo ▴ 60
5
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4
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693
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How to obtain unspliced tRNAs from FASTQ file
RNA-Seq Unspliced tRNA next-gen trna
2.4 years ago by nkabo ▴ 60
0
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0
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693
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Comment: C: How to obtain unspliced tRNAs from FASTQ file
2.5 years ago by nkabo ▴ 60
2
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3
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2.3k
views
How to process gene expression data from Affymetrix U133 Plus 2.0 in Python
python affymetrix gene expression data human
updated 2.5 years ago by 20 • written 4.0 years ago by ▴ 60
0
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0
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758
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Comment: C: How to obtain cell or tissue-specific enrichment of a list of genes
2.5 years ago by nkabo ▴ 60
0
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0
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652
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Comment: C: How to search for gene isoforms in FASTQ file
2.5 years ago by nkabo ▴ 60
0
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1
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758
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Comment: C: How to obtain cell or tissue-specific enrichment of a list of genes
2.5 years ago by nkabo ▴ 60
1
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2
replies
652
views
How to search for gene isoforms in FASTQ file
RNA-Seq fastq isoform identification
updated 2.5 years ago by 72k • written 2.5 years ago by ▴ 60
0
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1
reply
758
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Comment: C: How to obtain cell or tissue-specific enrichment of a list of genes
2.5 years ago by nkabo ▴ 60
0
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1
reply
758
views
Comment: C: How to obtain cell or tissue-specific enrichment of a list of genes
2.6 years ago by nkabo ▴ 60
2
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8
replies
758
views
How to obtain cell or tissue-specific enrichment of a list of genes
Gene enrichment R
2.6 years ago by nkabo ▴ 60
0
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0
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774
views
Comment: C: How to find cell-type specific gene expression signatures
2.6 years ago by nkabo ▴ 60
0
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0
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774
views
Comment: C: How to find cell-type specific gene expression signatures
2.6 years ago by nkabo ▴ 60
0
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1
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774
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Comment: C: How to find cell-type specific gene expression signatures
2.6 years ago by nkabo ▴ 60
3
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6
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774
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How to find cell-type specific gene expression signatures
RNA-Seq gene expression
2.6 years ago by nkabo ▴ 60
0
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1
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581
views
Comment: C: How to do filtering of expression values for miRNA data analysis
3.0 years ago by nkabo ▴ 60
3
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3
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581
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How to do filtering of expression values for miRNA data analysis
mirna bi-weight average
3.0 years ago by nkabo ▴ 60
9
votes
4
replies
900
views
How to find which genes are transcriptional factors from a list of genes?
transcription factor gene
updated 3.9 years ago by 39k • written 3.9 years ago by ▴ 60
0
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0
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900
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Comment: C: How to find which genes are transciptional factors from a list of genes?
3.9 years ago by nkabo ▴ 60
0
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0
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1.8k
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Comment: C: How to subset ExpressionSet based on vector of sample names
4.0 years ago by nkabo ▴ 60
0
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0
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1.8k
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Comment: C: How to subset ExpressionSet based on vector of sample names
4.0 years ago by nkabo ▴ 60
1
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5
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1.8k
views
How to subset ExpressionSet based on vector of sample names
R ExpressionSet subset Bioconductor
4.0 years ago by nkabo ▴ 60
0
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1
reply
2.3k
views
Comment: C: How to process gene expression data from Affymetrix U133 Plus 2.0 in Python
4.0 years ago by nkabo ▴ 60
1
vote
1
reply
2.1k
views
How to find average expression value for genes with multiple probes -Affymetrix
microarray expression data affymetrix
updated 4.1 years ago by 72k • written 4.1 years ago by ▴ 60
0
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2
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2.3k
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Comment: C: How to convert .cel to .fastq for miRNA analysis?
4.6 years ago by nkabo ▴ 60
4
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5
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2.3k
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How to convert .cel to .fastq for miRNA analysis?
miRNA analysis RNA sequencing next-gen
4.6 years ago by nkabo ▴ 60
0
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0
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1.3k
views
Extracting number of aminoacid change from variantions in R
R
6.8 years ago by nkabo ▴ 60
0
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0
replies
50k
views
Comment: C: Finding number of duplicates in R
6.8 years ago by nkabo ▴ 60
10
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5
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50k
views
Finding number of duplicates in R
R
updated 6.8 years ago by ▴ 280 • written 6.8 years ago by ▴ 60
0
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1
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50k
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Comment: C: Finding number of duplicates in R
6.8 years ago by nkabo ▴ 60
5
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4
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3.4k
views
How to filter genes in R
R
updated 6.8 years ago by ▴ 470 • written 6.8 years ago by ▴ 60
0
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0
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3.4k
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Comment: C: How to filter genes in R
6.8 years ago by nkabo ▴ 60
0
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0
replies
3.3k
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Comment: C: Tool for calculating variant frequency
6.8 years ago by nkabo ▴ 60
0
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1
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3.3k
views
Comment: C: Tool for calculating variant frequency
6.8 years ago by nkabo ▴ 60
0
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1
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3.3k
views
Comment: C: Tool for calculating variant frequency
6.8 years ago by nkabo ▴ 60
1
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6
replies
3.3k
views
Tool for calculating variant frequency
SNP genome
updated 6.8 years ago by 7.3k • written 6.8 years ago by ▴ 60
0
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0
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3.3k
views
Comment: C: Calculating variant frequency in R
6.9 years ago by nkabo ▴ 60
2
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7
replies
3.3k
views
Calculating variant frequency in R
SNP R
updated 6.9 years ago by 27k • written 6.9 years ago by ▴ 60
0
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0
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3.3k
views
Comment: C: Calculating variant frequency in R
6.9 years ago by nkabo ▴ 60
0
votes
1
reply
3.3k
views
Answer: A: Calculating variant frequency in R
6.9 years ago by nkabo ▴ 60
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