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0
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replies
5.3k
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6 follow
Error message running GeMoMa
gene
updated 3.1 years ago by 154k • written 6.2 years ago by ▴ 30
0
votes
4
replies
1.2k
views
Package lncDIFF input files format
RNA-Seq
updated 2.3 years ago by 45k • written 4.6 years ago by ▴ 30
4
votes
7
replies
6.6k
views
Beagle imputation - duplication position error
SNP
updated 4.6 years ago by • 0 • written 7.4 years ago by ▴ 30
0
votes
0
replies
639
views
rMATS reading only part of gtf issue
rna-seq
4.6 years ago by valopes ▴ 30
0
votes
0
replies
1.7k
views
Comment: C: How extract read ID from a bam file per mapped feature (gene)
5.0 years ago by valopes ▴ 30
0
votes
1
reply
1.7k
views
Comment: C: How extract read ID from a bam file per mapped feature (gene)
5.0 years ago by valopes ▴ 30
0
votes
4
replies
1.7k
views
How extract read ID from a bam file per mapped feature (gene)
alignment
5.0 years ago by valopes ▴ 30
0
votes
0
replies
1.1k
views
Comment: C: de novo transcriptome
5.3 years ago by valopes ▴ 30
0
votes
4
replies
1.1k
views
de novo transcriptome
assembly rna-seq
updated 5.4 years ago by 8.0k • written 5.4 years ago by ▴ 30
0
votes
0
replies
1.1k
views
Comment: C: de novo transcriptome
5.4 years ago by valopes ▴ 30
0
votes
0
replies
5.3k
views
Comment: C: Error message running GeMoMa
5.8 years ago by valopes ▴ 30
0
votes
0
replies
5.3k
views
Comment: C: Error message running GeMoMa
6.2 years ago by valopes ▴ 30
0
votes
1
reply
5.3k
views
Comment: C: Error message running GeMoMa
updated 6.2 years ago by 154k • written 6.2 years ago by ▴ 30
0
votes
1
reply
5.3k
views
Comment: C: Error message running GeMoMa
6.2 years ago by valopes ▴ 30
0
votes
2
replies
4.0k
views
Comment: C: Exception in thread "main" java.lang.IllegalArgumentException: Overlap between r
7.2 years ago by valopes ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: Exception in thread "main" java.lang.IllegalArgumentException: Overlap between r
7.2 years ago by valopes ▴ 30
0
votes
6
replies
4.0k
views
Exception in thread "main" java.lang.IllegalArgumentException: Overlap between reference and non-reference samples
SNP
7.2 years ago by valopes ▴ 30
0
votes
0
replies
6.6k
views
Comment: C: Beagle imputation - duplication position error
7.4 years ago by valopes ▴ 30
0
votes
1
reply
6.6k
views
Comment: C: Beagle imputation - duplication position error
updated 7.4 years ago by 48k • written 7.4 years ago by ▴ 30
0
votes
1
reply
4.4k
views
Comment: C: Getting a .vcf file from a Illumina SNPChip results (.bsc file)
7.4 years ago by valopes ▴ 30
0
votes
1
reply
4.4k
views
Comment: C: Getting a .vcf file from a Illumina SNPChip results (.bsc file)
7.4 years ago by valopes ▴ 30
0
votes
10
replies
4.4k
views
Getting a .vcf file from a Illumina SNPChip results (.bsc file)
SNP
updated 7.4 years ago by 89k • written 7.4 years ago by ▴ 30
0
votes
0
replies
1.2k
views
I have GBS, resequencing, and ChiSep data, is it possible/right to combine it to performe a GWA?
snp
7.6 years ago by valopes ▴ 30
0
votes
1
reply
4.5k
views
Comment: C: How can I generate a .vcf faster with GATK - HaplotypleCaller?
7.7 years ago by valopes ▴ 30
4
votes
6
replies
4.5k
views
How can I generate a .vcf faster with GATK - HaplotypleCaller?
snp
updated 7.7 years ago by 45k • written 7.7 years ago by ▴ 30
0
votes
0
replies
6.7k
views
Comment: C: Does STAR give the reads that were mapped at intergenic regions? How can I get t
7.7 years ago by valopes ▴ 30
0
votes
0
replies
6.7k
views
Comment: C: Does STAR give the reads that were mapped at intergenic regions? How can I get t
7.7 years ago by valopes ▴ 30
4
votes
5
replies
6.7k
views
Does STAR give the reads that were mapped at intergenic regions? How can I get the regions and count reads?
RNA-Seq
updated 7.7 years ago by ★ 5.2k • written 7.7 years ago by ▴ 30
0
votes
6
replies
1.8k
views
Trimmomatic non-conventional adaptors and error
next-gen
updated 7.8 years ago by 105k • written 7.8 years ago by ▴ 30
0
votes
2
replies
1.8k
views
Comment: C: Trimmomatic non-conventional adaptors and error
7.8 years ago by valopes ▴ 30
0
votes
1
reply
7.3k
views
Comment: C: Exception in thread "main" htsjdk.samtools.SAMFormatException: Error parsing SAM
8.0 years ago by valopes ▴ 30
0
votes
1
reply
7.3k
views
Comment: C: Exception in thread "main" htsjdk.samtools.SAMFormatException: Error parsing SAM
8.0 years ago by valopes ▴ 30
0
votes
1
reply
7.3k
views
Comment: C: Exception in thread "main" htsjdk.samtools.SAMFormatException: Error parsing SAM
8.0 years ago by valopes ▴ 30
1
vote
7
replies
7.3k
views
Exception in thread "main" htsjdk.samtools.SAMFormatException: Error parsing SAM header. @RG line missing SM tag. Line: @RG ID:Sample1; File /pat…
Assembly SNP
updated 8.0 years ago by 166k • written 8.0 years ago by ▴ 30
0
votes
0
replies
5.0k
views
Comment: C: Counting and extracting in a new file the unique mapped reads from BWA 0.7.15-r1
8.0 years ago by valopes ▴ 30
0
votes
0
replies
5.0k
views
Comment: C: Counting and extracting in a new file the unique mapped reads from BWA 0.7.15-r1
8.0 years ago by valopes ▴ 30
1
vote
6
replies
5.0k
views
Counting and extracting in a new file the unique mapped reads from BWA 0.7.15-r1140 mapping
Assembly
updated 8.0 years ago by 89k • written 8.0 years ago by ▴ 30
0
votes
0
replies
5.0k
views
Comment: C: Counting and extracting in a new file the unique mapped reads from BWA 0.7.15-r1
8.0 years ago by valopes ▴ 30
0
votes
0
replies
4.1k
views
Comment: C: Error converting sam to bam
8.0 years ago by valopes ▴ 30
0
votes
1
reply
4.1k
views
Comment: C: Error converting sam to bam
8.0 years ago by valopes ▴ 30
0
votes
0
replies
4.1k
views
Comment: C: Error converting sam to bam
8.0 years ago by valopes ▴ 30
4
votes
17
replies
4.1k
views
Error converting sam to bam
genome
updated 8.0 years ago by 166k • written 8.0 years ago by ▴ 30
0
votes
2
replies
4.1k
views
Comment: C: Error converting sam to bam
updated 8.0 years ago by 48k • written 8.0 years ago by ▴ 30
0
votes
1
reply
4.1k
views
Comment: C: Error converting sam to bam
8.0 years ago by valopes ▴ 30
0
votes
2
replies
4.1k
views
Comment: C: Error converting sam to bam
updated 8.0 years ago by 48k • written 8.0 years ago by ▴ 30
0
votes
0
replies
4.1k
views
Comment: C: Error converting sam to bam
8.0 years ago by valopes ▴ 30
2
votes
3
replies
1.8k
views
Counting single end reads
RNA-Seq
updated 8.3 years ago by 20 • written 8.3 years ago by ▴ 30
0
votes
3
replies
2.1k
views
Star for Soybean RNA-seq aligment
RNA-Seq
updated 8.3 years ago by 56k • written 8.3 years ago by ▴ 30
0
votes
0
replies
1.8k
views
Comment: C: Counting single end reads
8.3 years ago by valopes ▴ 30
0
votes
1
reply
2.6k
views
Comment: C: RNA-seq Hiseq 2000 Trimming
8.4 years ago by valopes ▴ 30
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