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1
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2.0k
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Comparing genes expression across samples in single cell RNA sequencing.
RNA-Seq Seurat scRNA
6.6 years ago by halo22 ▴ 300
0
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0
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5.8k
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Answer: A: DMRcate results: How to find out which CpG sites constitute each DMR
6.7 years ago by halo22 ▴ 300
0
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0
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2.2k
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Comment: C: A workflow for identification of differentially methylated regions, starting wit
6.7 years ago by halo22 ▴ 300
0
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0
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2.2k
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Answer: A: A workflow for identification of differentially methylated regions, starting wit
6.7 years ago by halo22 ▴ 300
1
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0
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7.9k
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Answer: A: Problem with topGO: GO term enrichment analysis
6.7 years ago by halo22 ▴ 300
0
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1
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7.9k
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Answer: A: Problem with topGO: GO term enrichment analysis
6.7 years ago by halo22 ▴ 300
0
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0
replies
1.3k
views
When is centering and scaling needed before doing hierarchical clustering?
clustering statistics machine learning
6.7 years ago by halo22 ▴ 300
2
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0
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2.2k
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Answer: A: GeneSCF and P-value Benjamini and Hochberg (FDR)
6.7 years ago by halo22 ▴ 300
1
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1
reply
1.8k
views
DeSeq2 for time point analysis? And what is the best way to handle technical replicates
RNA-Seq Desq2
updated 6.8 years ago by 104k • written 6.8 years ago by ▴ 300
0
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0
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5.1k
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Comment: C: Marker genes for different cell types
6.8 years ago by halo22 ▴ 300
0
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0
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1.8k
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Comment: C: How to use the qvalue function for multiple testing?
6.8 years ago by halo22 ▴ 300
4
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4
replies
1.8k
views
How to use the qvalue function for multiple testing?
snp R RNA-Seq
updated 6.8 years ago by 11k • written 6.8 years ago by ▴ 300
0
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6
replies
1.8k
views
Pathway analysis for proteins without a ranking criteria
genome RNA-Seq pathway analysis
updated 6.9 years ago by 7.5k • written 6.9 years ago by ▴ 300
0
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1
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1.8k
views
Comment: C: Pathway analysis for proteins without a ranking criteria
6.9 years ago by halo22 ▴ 300
9
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5
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1.7k
views
Node requirement on a cluster for bioinformatics analysis
alignment genome next-gen
updated 6.9 years ago by 20 • written 7.9 years ago by ▴ 300
0
votes
1
reply
981
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Updated list of genes related to vitamin D and obesity?
next-gen RNA-Seq genome
updated 7.0 years ago by ▴ 360 • written 7.0 years ago by ▴ 300
0
votes
2
replies
2.3k
views
Filtering RNA-seq expression matrix?
RNA-Seq sequencing rNA
updated 7.0 years ago by ★ 1.2k • written 7.0 years ago by ▴ 300
6
votes
2
replies
2.1k
views
Analysis of sc-RNA data
RNA-Seq sequencing
updated 7.1 years ago by ▴ 50 • written 7.2 years ago by ▴ 300
0
votes
2
replies
1.5k
views
Pathway analysis for significant proteins
protein pathwayAnalysis genome
updated 7.2 years ago by ★ 1.9k • written 7.2 years ago by ▴ 300
1
vote
1
reply
1.4k
views
Specific questions about pathway analysis
next-gen genome pathway gene sequence
updated 7.3 years ago by ▴ 180 • written 7.3 years ago by ▴ 300
3
votes
1
reply
3.2k
views
Single cell RNA sequencing with Fluidigm vs Drop-seq?
RNA-Seq sequencing next-gen
updated 7.3 years ago by ★ 2.9k • written 7.7 years ago by ▴ 300
0
votes
0
replies
2.1k
views
Error while using ChAMP
methylation 450k bioconductor R
7.4 years ago by halo22 ▴ 300
0
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0
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5.7k
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Comment: C: Help with Minfi for methylation analysis.
7.5 years ago by halo22 ▴ 300
0
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1
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5.7k
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Comment: C: Help with Minfi for methylation analysis.
7.5 years ago by halo22 ▴ 300
2
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5
replies
5.7k
views
Help with Minfi for methylation analysis.
snp sequencing methylation 450k
updated 7.5 years ago by 13k • written 7.5 years ago by ▴ 300
4
votes
7
replies
2.0k
views
Allele specific analysis
RNA-Seq next-gen alignment
updated 7.5 years ago by ★ 1.2k • written 7.7 years ago by ▴ 300
0
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0
replies
2.0k
views
Human 450K methylation data analysis for DMP
R genome snp next-gen sequencing
7.6 years ago by halo22 ▴ 300
5
votes
1
reply
1.6k
views
Fundamental question about biological replicates and cuffdiff
RNA-Seq genome r
updated 7.7 years ago by 104k • written 7.7 years ago by ▴ 300
0
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0
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2.0k
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Comment: C: Allele specific analysis
7.7 years ago by halo22 ▴ 300
0
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0
replies
1.1k
views
Experimental design that uses sequence data from WGS, RNA and Methyl-seq
RNA-Seq genome sequencing
7.8 years ago by halo22 ▴ 300
2
votes
4
replies
8.6k
views
What is Digital Gene Expression?
RNA-Seq sequencing next-gen
updated 7.9 years ago by 8.3k • written 7.9 years ago by ▴ 300
0
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0
replies
6.1k
views
Comment: C: How To Parse Data From An Owl File
12.1 years ago by halo22 ▴ 300
82 results • Page 2 of 2
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