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Comment: Comment: demultiplex paired end fastq file with mixed samples with barcode
3.0 years ago by hellocita ▴ 40
0
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3
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2.1k
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demultiplex paired end fastq file with mixed samples with barcode
RNAseq fastq demultiplex
updated 3.0 years ago by 141k • written 3.0 years ago by ▴ 40
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3.0k
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Comment: Comment: why my volcano plot looks strange?
3.0 years ago by hellocita ▴ 40
0
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1
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3.0k
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Comment: Comment: why my volcano plot looks strange?
3.0 years ago by hellocita ▴ 40
2
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6
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3.0k
views
why my volcano plot looks strange?
wilcox.test RNAseq Metabolomics LCMS
updated 3.0 years ago by 21k • written 3.0 years ago by ▴ 40
0
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1
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1.2k
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Comment: C: Gene ID problems when mapping and counting
3.1 years ago by hellocita ▴ 40
4
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4
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1.2k
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Gene ID problems when mapping and counting
RNA-Seq
3.1 years ago by hellocita ▴ 40
0
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1
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1.5k
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Comment: C: should I merge several SRR fastq file download from sra?
3.1 years ago by hellocita ▴ 40
0
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1
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1.5k
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Comment: C: should I merge several SRR fastq file download from sra?
3.1 years ago by hellocita ▴ 40
3
votes
6
replies
1.5k
views
should I merge several SRR fastq file download from sra?
RNA-Seq
updated 3.1 years ago by 15k • written 3.1 years ago by ▴ 40
2
votes
2
replies
1.3k
views
problem with download fastq file from SRA
RNA-Seq
updated 3.1 years ago by 141k • written 3.1 years ago by ▴ 40
0
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0
replies
2.2k
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Comment: C: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
5.1 years ago by hellocita ▴ 40
0
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1
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2.2k
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Comment: C: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
5.1 years ago by hellocita ▴ 40
3
votes
5
replies
2.2k
views
should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential expression analysis
RNA-Seq rna-seq
updated 10 months ago by ▴ 90 • written 5.1 years ago by ▴ 40
0
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1
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1.5k
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Comment: C: will different proportion of control/patient samples affect gene's Pearson corre
6.2 years ago by hellocita ▴ 40
2
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3
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1.5k
views
will different proportion of control/patient samples affect gene's Pearson correlation?
hierarchical clustering pearson correlation
updated 6.2 years ago by 87k • written 6.2 years ago by ▴ 40
0
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0
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2.5k
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Comment: C: Why does GO enrichment result give different results when gene list cutoff chang
6.2 years ago by hellocita ▴ 40
1
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0
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2.5k
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Comment: C: Why does GO enrichment result give different results when gene list cutoff chang
6.2 years ago by hellocita ▴ 40
4
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4
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2.5k
views
Why does GO enrichment result give different results when gene list cutoff change?
RNA-Seq gene
updated 6.2 years ago by ★ 1.2k • written 6.2 years ago by ▴ 40
0
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0
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3.3k
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Comment: C: PANTHER and DAVID can't recognized some Ensembl gene ID?
6.4 years ago by hellocita ▴ 40
3
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2
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3.3k
views
PANTHER and DAVID can't recognized some Ensembl gene ID?
gene RNA-Seq
updated 6.4 years ago by ★ 2.6k • written 6.4 years ago by ▴ 40
2
votes
2
replies
1.7k
views
batch effect of repeated experiment
RNA-Seq R gene
updated 6.4 years ago by 20 • written 6.6 years ago by ▴ 40
0
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0
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8.7k
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Answer: A: Gwas - Permutation Testing?
7.0 years ago by hellocita ▴ 40
1
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2
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5.4k
views
How to Calculate FDR in permutation F test
R
updated 7.0 years ago by 27k • written 7.0 years ago by ▴ 40
0
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1
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1.5k
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Comment: C: remove effect of factors in differential analysis
7.0 years ago by hellocita ▴ 40
1
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4
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1.5k
views
remove effect of factors in differential analysis
R
7.0 years ago by hellocita ▴ 40
0
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0
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3.1k
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Comment: C: remove batch effect for multiple tumor data
7.1 years ago by hellocita ▴ 40
1
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4
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3.1k
views
remove batch effect for multiple tumor data
RNA-Seq batch-effect
updated 6 days ago by 43k • written 7.1 years ago by ▴ 40
0
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0
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3.1k
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Comment: C: remove batch effect for multiple tumor data
7.1 years ago by hellocita ▴ 40
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