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21
votes
12
replies
23k
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How to run the Deseq2 tool without replicates.
RNA-Seq rna-seq Deseq2 Bioconductor R
updated 5.0 years ago by • 0 • written 6.2 years ago by ▴ 90
0
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0
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1.2k
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Comment: C: codon changes finding in gene
5.4 years ago by fatimarasool135 ▴ 90
0
votes
4
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1.2k
views
codon changes finding in gene
snp R software error gene RNA-Seq
updated 5.4 years ago by 154k • written 5.4 years ago by ▴ 90
0
votes
1
reply
1.2k
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Comment: C: codon changes finding in gene
5.4 years ago by fatimarasool135 ▴ 90
1
vote
0
replies
700
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RNA Editing sites that leads to codons changes cause the change in amino acid
rna-seq
updated 5.7 years ago by 90k • written 5.7 years ago by ▴ 90
0
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4
replies
1.9k
views
error in trinity
RNA-Seq Assembly assembly alignment
6.0 years ago by fatimarasool135 ▴ 90
0
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0
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1.9k
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Comment: C: error in trinity
updated 6.0 years ago by 5.9k • written 6.0 years ago by ▴ 90
0
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0
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1.9k
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Comment: C: error in trinty
6.0 years ago by fatimarasool135 ▴ 90
0
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0
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3.8k
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Comment: C: error in installation of TRinity by conda
6.0 years ago by fatimarasool135 ▴ 90
1
vote
2
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3.8k
views
error in installation of TRinity by conda
RNA-Seq software error assembly
6.0 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.2 years ago by fatimarasool135 ▴ 90
0
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1
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4.9k
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Comment: C: edgeR dispersion value (common BCV (square- root-dispersion)) when no replicates
6.2 years ago by fatimarasool135 ▴ 90
1
vote
4
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4.9k
views
edgeR dispersion value (common BCV (square- root-dispersion)) when no replicates in dataset
R RNA-Seq next-gen software error genome
6.2 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
4.4k
views
Comment: A: biomaRt: Cannot access the zebra fish dataset
6.2 years ago by fatimarasool135 ▴ 90
1
vote
0
replies
813
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wheat_gene_ensembl not available on biomaRt
RNA-Seq genome assembly gene
6.2 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
23k
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Comment: A: How to run the Deseq2 tool wothout replicates.
6.2 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
23k
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Comment: C: How to run the Deseq2 tool wothout replicates.
6.2 years ago by fatimarasool135 ▴ 90
0
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0
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2.8k
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Comment: C: how to set Deseq factor
6.2 years ago by fatimarasool135 ▴ 90
0
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1
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2.8k
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Comment: C: how to set Deseq factor
6.2 years ago by fatimarasool135 ▴ 90
0
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0
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2.8k
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Comment: A: how to set Deseq factor
6.2 years ago by fatimarasool135 ▴ 90
1
vote
7
replies
2.8k
views
how to set Deseq factor
R RNA-Seq assembly software error next-gen
6.2 years ago by fatimarasool135 ▴ 90
0
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1
reply
2.8k
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Comment: C: how to set Deseq factor
6.2 years ago by fatimarasool135 ▴ 90
0
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1
reply
3.2k
views
Comment: C: count matrices for genes and transcripts for all samples
6.2 years ago by fatimarasool135 ▴ 90
0
votes
5
replies
3.2k
views
count matrices for genes and transcripts for all samples
RNA-Seq software error alignment Assembly
updated 6.2 years ago by ▴ 740 • written 6.2 years ago by ▴ 90
0
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0
replies
3.2k
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Comment: C: count matrices for genes and transcripts for all samples
6.2 years ago by fatimarasool135 ▴ 90
2
votes
1
reply
1.8k
views
htseq-count error while bam file was sorted by name
RNA-Seq assembly alignment software error R
6.2 years ago by fatimarasool135 ▴ 90
0
votes
0
replies
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.2 years ago by fatimarasool135 ▴ 90
0
votes
2
replies
298k
views
Comment: A: Gene Id Conversion Tool
updated 6.2 years ago by 45k • written 6.6 years ago by ▴ 90
0
votes
1
reply
4.0k
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Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.2 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.2 years ago by fatimarasool135 ▴ 90
0
votes
0
replies
953
views
graphs plotong by ballgown
RNA-Seq R software error
6.3 years ago by fatimarasool135 ▴ 90
0
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1
reply
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.3 years ago by fatimarasool135 ▴ 90
0
votes
0
replies
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.3 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
4.0k
views
Comment: C: gene sequence fetching from bam or fastq file of rna seq data
6.3 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
1.8k
views
Comment: C: extraction significant genes
6.3 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
2.3k
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Comment: C: graphs plotong by R
6.4 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
1.8k
views
Comment: C: extraction significant genes
6.4 years ago by fatimarasool135 ▴ 90
0
votes
0
replies
2.3k
views
Comment: C: graphs plotong by R
6.4 years ago by fatimarasool135 ▴ 90
4
votes
6
replies
1.8k
views
extraction significant genes
R RNA-Seq
updated 4.1 years ago by 45k • written 6.4 years ago by ▴ 90
0
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1
reply
2.3k
views
Comment: C: graphs plotong by R
6.4 years ago by fatimarasool135 ▴ 90
7
votes
1
reply
1.1k
views
Graph for PCs, can't apply colours to the points.
R RNA-Seq
updated 6.4 years ago by 12k • written 6.4 years ago by ▴ 90
0
votes
1
reply
2.3k
views
Comment: C: graphs plotong by R
6.4 years ago by fatimarasool135 ▴ 90
0
votes
0
replies
2.3k
views
Comment: C: graphs plotong by R
6.4 years ago by fatimarasool135 ▴ 90
2
votes
9
replies
2.3k
views
graphs plotong by R
R rna-seq
updated 6.4 years ago by 35k • written 6.4 years ago by ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: separation of number of DE genes for one sample from output file obtain from ba
6.5 years ago by fatimarasool135 ▴ 90
3
votes
3
replies
1.4k
views
separation of number of DE genes for one sample from output file obtain from ballgown.
RNA-Seq rna-seq Assembly gene software error
updated 6.5 years ago by 90k • written 6.5 years ago by ▴ 90
0
votes
0
replies
3.8k
views
Comment: C: how to interpret hisat2 result
6.6 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
3.8k
views
Comment: C: how to interpret hisat2 result
6.6 years ago by fatimarasool135 ▴ 90
1
vote
7
replies
3.8k
views
how to interpret hisat2 result
RNA-Seq alignment Assembly
6.6 years ago by fatimarasool135 ▴ 90
0
votes
1
reply
3.8k
views
Comment: A: how to interpret hisat2 result
6.6 years ago by fatimarasool135 ▴ 90
108 results • Page 1 of 3
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