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576
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Comparing the regulators and Pathways induced by Differential Expression Analysis of two treatments at the same time point
timepoints Comparison RNA-Seq DE treatments
3.1 years ago by mkh ▴ 60
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2
replies
3.4k
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Online alignment for large fasta files
genome alignment sequence fasta
updated 4.9 years ago by ▴ 540 • written 4.9 years ago by ▴ 60
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0
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817
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gff3 format, modENCODE, score and ChIP-Seq
ChIP-Seq bed
updated 2.5 years ago by 45k • written 5.4 years ago by ▴ 60
5
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5
replies
1.9k
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RNAseq service recommendations
next-gen rna-seq
updated 6.3 years ago by ▴ 130 • written 6.3 years ago by ▴ 60
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1
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1.9k
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Comment: C: RNAseq service recommendations
6.3 years ago by mkh ▴ 60
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7
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1.5k
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Forum: Construct a small computing server for GWAS Analysis
assembly
updated 2.3 years ago by 45k • written 6.4 years ago by ▴ 60
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1
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1.5k
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Comment: A: Construct a small computing server for GWAS Analysis
6.4 years ago by mkh ▴ 60
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1
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1.5k
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Comment: A: Construct a small computing server for GWAS Analysis
6.4 years ago by mkh ▴ 60
1
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1
reply
1.1k
views
Merge overlapped gene coordinates in bed file format
ChIP-Seq
updated 6.4 years ago by 166k • written 6.4 years ago by ▴ 60
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1
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1.6k
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Comment: C: Specific Antibodies for ChiP-Seq assay
6.5 years ago by mkh ▴ 60
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1.6k
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Comment: C: Specific Antibodies for ChiP-Seq assay
6.5 years ago by mkh ▴ 60
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2
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1.6k
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Comment: C: Specific Antibodies for ChiP-Seq assay
6.5 years ago by mkh ▴ 60
3
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8
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1.6k
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Specific Antibodies for ChiP-Seq assay
ChIP-Seq
6.5 years ago by mkh ▴ 60
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0
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6.0k
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Comment: C: PCA plot for TOP 500 genes + prcomp
6.5 years ago by mkh ▴ 60
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0
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1.2k
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A pipeline/software to analyse Drip-seq
next-gen
written 6.9 years ago by ▴ 60
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905
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How to study open promoters are correlated with high expression using MNase and RNA-seq data?
rna-seq MNase
updated 7.0 years ago by 20 • written 7.1 years ago by ▴ 60
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4.8k
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Comment: A: How to visualize Hi-C bed file format?
updated 7.1 years ago by 154k • written 7.1 years ago by ▴ 60
2
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3
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4.8k
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How to visualize Hi-C bed file format?
genome Hi-C
7.1 years ago by mkh ▴ 60
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1
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6.0k
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Comment: A: PCA plot for TOP 500 genes + prcomp
updated 7.1 years ago by 154k • written 7.1 years ago by ▴ 60
7
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6
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6.0k
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PCA plot for TOP 500 genes + prcomp
RNA-Seq
7.1 years ago by mkh ▴ 60
0
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1
reply
12k
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Answer: A: How to get PCA3 and PCA4 from Deseq2?
7.1 years ago by mkh ▴ 60
7
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8
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12k
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How to get PCA3 and PCA4 from Deseq2?
RNA-seq
7.1 years ago by mkh ▴ 60
3
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11
replies
2.8k
views
massive pairwise sequence alignment
alignment sequence
updated 7.6 years ago by 22k • written 7.7 years ago by ▴ 60
1
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0
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2.8k
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Answer: A: massive pairwise sequence alignment
7.6 years ago by mkh ▴ 60
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1
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1.5k
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Comment: C: Split RNA-seq reads
7.7 years ago by mkh ▴ 60
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2
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2.8k
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Comment: C: massive pairwise sequence alignment
7.7 years ago by mkh ▴ 60
0
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1
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2.8k
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Comment: C: massive pairwise sequence alignment
7.7 years ago by mkh ▴ 60
0
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1
reply
2.8k
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Comment: C: massive pairwise sequence alignment
7.7 years ago by mkh ▴ 60
0
votes
1
reply
1.4k
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chipseq identified sequences
ChIP-Seq
updated 7.7 years ago by 3.4k • written 7.7 years ago by ▴ 60
1
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1
reply
4.1k
views
Sringtie gff output has "STRG." instead of genid
Assembly RNA-Seq
updated 7.7 years ago by 154k • written 7.7 years ago by ▴ 60
2
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3
replies
3.5k
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FIMO: scan motif on a DNA sequence
alignment genome ChIP-Seq statics
7.7 years ago by mkh ▴ 60
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0
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3.5k
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Answer: A: FIMO: scan motif on a DNA sequence
7.7 years ago by mkh ▴ 60
1
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3
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1.5k
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Split RNA-seq reads
RNA-Seq
updated 8.0 years ago by 166k • written 8.0 years ago by ▴ 60
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3
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3.5k
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Difference Between Gene Expression And Transcript Expression
RNA-Seq kallisto
8.2 years ago by mkh ▴ 60
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1
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1.4k
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metagenomic profiling and population analysis
RNA-Seq next-gen
updated 8.5 years ago by 12k • written 8.5 years ago by ▴ 60
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