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questions
0
votes
2
replies
1.4k
views
checking downstream effects of genes
RNA-Seq
7.6 years ago by
Pappu
★ 2.1k
6
votes
2
replies
6.2k
views
Precomputed TCGA tumor purity data
tumor purity
updated 7.6 years ago by
vakul.mohanty
▴ 270 • written 7.9 years ago by
Pappu
★ 2.1k
1
vote
2
replies
3.5k
views
Positive Selection And Evolutionary Model Selection
paml
updated 7.7 years ago by
Brice Sarver
★ 3.8k • written 10.2 years ago by
Pappu
★ 2.1k
0
votes
1
reply
1.7k
views
visualize noncoding mutations
cbioportal
cancer
genome
7.7 years ago by
Pappu
★ 2.1k
0
votes
1
reply
2.9k
views
TCGA barcode to tumor type mapping
tcga
updated 7.8 years ago by
EagleEye
7.5k • written 7.8 years ago by
Pappu
★ 2.1k
3
votes
3
replies
2.3k
views
Sites like cBioportal
cancer
updated 7.8 years ago by
EagleEye
7.5k • written 7.8 years ago by
Pappu
★ 2.1k
4
votes
2
replies
2.6k
views
cancer genes database
cancer
updated 7.8 years ago by
EagleEye
7.5k • written 7.8 years ago by
Pappu
★ 2.1k
1
vote
3
replies
2.5k
views
Assembled TCGA dataset download
TCGA
updated 8.1 years ago by
ivivek_ngs
★ 5.2k • written 8.1 years ago by
Pappu
★ 2.1k
1
vote
2
replies
2.7k
views
Finding overlap between BAM files or BAM and gff3 files
ChIP-Seq
updated 8.1 years ago by
igor
13k • written 8.1 years ago by
Pappu
★ 2.1k
1
vote
2
replies
1.8k
views
Filtering out mutations from cancer dataset
mutation
8.2 years ago by
Pappu
★ 2.1k
4
votes
3
replies
1.6k
views
Divergence time of all species compared to human
divergence time
updated 8.2 years ago by
Biostar
20 • written 8.3 years ago by
Pappu
★ 2.1k
0
votes
1
reply
1.7k
views
mapping known epitopes in a protein sequcence
epitope
updated 8.2 years ago by
Amitm
★ 2.2k • written 8.2 years ago by
Pappu
★ 2.1k
7
votes
4
replies
5.6k
views
machine learning datasets for bioinformatics
learning
machine
updated 21 months ago by
Ram
43k • written 8.3 years ago by
Pappu
★ 2.1k
0
votes
0
replies
3.2k
views
Difference between MrBayes and Beast MCC tree
tree
8.3 years ago by
Pappu
★ 2.1k
5
votes
9
replies
3.0k
views
GUI framework for sequence data analysis and visulaization
python
updated 8.3 years ago by
vranckx.katleen
▴ 40 • written 8.3 years ago by
Pappu
★ 2.1k
12
votes
3
replies
15k
views
Easiest way to convert python script to web application
python
updated 21 months ago by
Ram
43k • written 8.4 years ago by
Pappu
★ 2.1k
3
votes
3
replies
4.1k
views
Free/cheap cloud computing resource for processing NGS/Bioinformatic data
cloud-computing
updated 8.5 years ago by
Biostar
20 • written 8.5 years ago by
Pappu
★ 2.1k
7
votes
3
replies
2.7k
views
What Does 'Fragment' Mean In Uniprot Database?
uniprot
updated 8.5 years ago by
Biostar
20 • written 10.6 years ago by
Pappu
★ 2.1k
1
vote
5
replies
3.7k
views
Extract protein complex structures from pdb database
pdb
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Pappu
★ 2.1k
12
votes
6
replies
2.8k
views
Organizing bioinformatics oriented python scripts
python
updated 20 months ago by
Ram
43k • written 8.6 years ago by
Pappu
★ 2.1k
2
votes
1
reply
2.0k
views
Rate Of Evolution, Gc Content, Codon Usage And Rate Of Amino Acid Substitution
evolution
updated 8.7 years ago by
Biostar
20 • written 10.4 years ago by
Pappu
★ 2.1k
3
votes
2
replies
2.1k
views
comparing substitution rate/divergence of two different genes
phylogenetic tree
updated 8.7 years ago by
Biostar
20 • written 9.3 years ago by
Pappu
★ 2.1k
0
votes
1
reply
1.6k
views
Conservation of protein interaction site
conservation
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Pappu
★ 2.1k
0
votes
3
replies
1.8k
views
Protein Structure Prediction From Multiple Sequence Alignments
msa
updated 17 months ago by
Ram
43k • written 11.3 years ago by
Pappu
★ 2.1k
1
vote
5
replies
4.1k
views
Identification Of Protein Complexes In A List Of Proteins
updated 22 months ago by
Ram
43k • written 11.1 years ago by
Pappu
★ 2.1k
9
votes
6
replies
3.3k
views
Selection Of Orthologs For Building Phylogenetic Tree
phylogenetic-tree
updated 16 months ago by
Ram
43k • written 10.1 years ago by
Pappu
★ 2.1k
0
votes
0
replies
1.7k
views
Deconvolution Of Hsqc Spectra Of Membrane Proteins?
updated 9.0 years ago by
Biostar
20 • written 12.2 years ago by
Pappu
★ 2.1k
1
vote
4
replies
3.7k
views
Synteny Diagram In Biopython
biopython
python
updated 9.0 years ago by
Biostar
20 • written 10.1 years ago by
Pappu
★ 2.1k
5
votes
3
replies
10k
views
Visualize Raxml 8 Bootstrap Tree
ete2
figtree
raxml
bootstrap
updated 2.1 years ago by
Ram
43k • written 10.2 years ago by
Pappu
★ 2.1k
7
votes
9
replies
4.1k
views
Analysis Of The Cancer Genome Atlas
cancer
genomics
python
updated 9.8 years ago by
Biostar
20 • written 10.4 years ago by
Pappu
★ 2.1k
4
votes
1
reply
2.2k
views
Mrbayes Produces Incorrect Tree When Run In Mpi Mode
updated 9.8 years ago by
Biostar
20 • written 10.1 years ago by
Pappu
★ 2.1k
12
votes
8
replies
3.4k
views
how to make a good story out of the the results for publication in high impact journal
paper
updated 2.4 years ago by
Ram
43k • written 9.8 years ago by
Pappu
★ 2.1k
3
votes
3
replies
2.6k
views
Residue Conservation: Sequence Logo Vs Codeml Or Rate4Site
updated 2.4 years ago by
Ram
43k • written 10.1 years ago by
Pappu
★ 2.1k
0
votes
1
reply
1.5k
views
Fetching Gene_Id Url After Ensembl Search
python
updated 2.5 years ago by
Ram
43k • written 10.2 years ago by
Pappu
★ 2.1k
1
vote
2
replies
2.0k
views
Making Network Diagram From Pairs Of Gene Names
python
cytoscape
updated 9.9 years ago by
Biostar
20 • written 11.0 years ago by
Pappu
★ 2.1k
0
votes
0
replies
2.1k
views
Network Diagram Of Protein Domain Architectures
cytoscape
updated 9.9 years ago by
Biostar
20 • written 10.1 years ago by
Pappu
★ 2.1k
11
votes
3
replies
3.6k
views
Counting the number of paralogs in various species
python
ensembl
sequence
updated 9.9 years ago by
Prakki Rama
★ 2.7k • written 9.9 years ago by
Pappu
★ 2.1k
21
votes
4
replies
3.0k
views
Plotting Species Distribution Of Proteins
python
updated 10.0 years ago by
Biostar
20 • written 11.2 years ago by
Pappu
★ 2.1k
4
votes
6
replies
7.5k
views
Merging Bootstrap Values And Posterior Probabilities
python
updated 10.1 years ago by
mossmatters
▴ 90 • written 10.1 years ago by
Pappu
★ 2.1k
7
votes
5
replies
3.8k
views
Colored Background Of A Phylogenetic Tree
python
updated 10.1 years ago by
Biostar
20 • written 11.3 years ago by
Pappu
★ 2.1k
4
votes
2
replies
3.0k
views
Viewing Mrbayes Tree By Ete2
python
biopython
10.1 years ago by
Pappu
★ 2.1k
3
votes
5
replies
2.1k
views
Collapsing Branches Of A Tree Which Are Closely Related And Has Support Values <0.5
biopython
updated 10.1 years ago by
Biostar
20 • written 10.2 years ago by
Pappu
★ 2.1k
3
votes
1
reply
2.6k
views
Renaming Sequence Ids Of Phylogenetic Trees For Manuscript
uniprot
ensembl
updated 10.1 years ago by
Emily
23k • written 10.1 years ago by
Pappu
★ 2.1k
4
votes
4
replies
2.2k
views
Downloading Human And Other Completely Sequenced Proteomes To Search Homologs
uniprot
updated 10.1 years ago by
Biojl
★ 1.7k • written 10.2 years ago by
Pappu
★ 2.1k
1
vote
1
reply
2.4k
views
Precomputed Secondary Structure And Disorder Prediction Of Uniprot Entries
uniprot
10.1 years ago by
Pappu
★ 2.1k
7
votes
9
replies
3.9k
views
Dubious Pfam Domain Annotation Of A Protein
hmmer
10.1 years ago by
Pappu
★ 2.1k
1
vote
3
replies
2.2k
views
Output Full Lenghth Search Of Hmmer Output
hmmer
10.1 years ago by
Pappu
★ 2.1k
2
votes
3
replies
2.4k
views
Why Proteins Of Some Genomes Are More Stable
genomics
10.1 years ago by
Pappu
★ 2.1k
1
vote
1
reply
2.2k
views
Differences In The Phylogenetic Trees From Protein And Codon Msa
msa
updated 10.1 years ago by
DG
7.3k • written 10.1 years ago by
Pappu
★ 2.1k
9
votes
4
replies
3.4k
views
Homologous Sequence Identity
updated 10.2 years ago by
Asaf
10k • written 10.2 years ago by
Pappu
★ 2.1k
169 results • Page
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