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Showing :
questions
103
votes
27
replies
89k
views
21 follow
Extract Sub-Set Of Regions From Vcf File
vcf
tabix
genome
filter
updated 11 months ago by
NIRJHAR
• 0 • written 11.9 years ago by
Rubal7
▴ 830
59
votes
36
replies
39k
views
27 follow
Pca From Vcf Files
pca
genome
vcf
updated 21 months ago by
hewm2008
▴ 40 • written 12.0 years ago by
Rubal7
▴ 830
5
votes
6
replies
4.2k
views
6 follow
Split Vcf File Using Gatk
genome
gatk
vcf
parsing
updated 24 months ago by
jihosac954
• 0 • written 11.9 years ago by
Rubal7
▴ 830
13
votes
13
replies
14k
views
6 follow
Comparing And Plotting Coverage Between Two Bam Files
bam
coverage
genome
chromosome
updated 5.0 years ago by
john.e.major.jr
• 0 • written 11.9 years ago by
Rubal7
▴ 830
7
votes
10
replies
3.1k
views
Confirming Structural Variants In The Genome
genome
coverage
updated 5.7 years ago by
Biostar
20 • written 11.8 years ago by
Rubal7
▴ 830
8
votes
4
replies
6.0k
views
Retrieve Ensembl Gene Ids From List Of Regions Using Hg18 Annotation
genome
search
genes
updated 6.4 years ago by
Biostar
20 • written 11.6 years ago by
Rubal7
▴ 830
5
votes
10
replies
7.4k
views
7 follow
Vcftools Runs Of Homozygosity Option
vcf
updated 22 months ago by
Ram
43k • written 12.1 years ago by
Rubal7
▴ 830
3
votes
7
replies
4.2k
views
Finding Information About Hypothetical Genes
gene
function
genome
sequence
updated 8.1 years ago by
Biostar
20 • written 11.8 years ago by
Rubal7
▴ 830
41
votes
13
replies
26k
views
9 follow
What Are These Rp11 'Genes' In The Genome?
ensembl
gene
annotation
genome
updated 18 months ago by
Ram
43k • written 11.7 years ago by
Rubal7
▴ 830
17
votes
10
replies
15k
views
7 follow
How To Get Phasing Status From Vcf Files
vcf
haplotype
genome
updated 2.2 years ago by
Ram
43k • written 11.8 years ago by
Rubal7
▴ 830
5
votes
2
replies
2.4k
views
Getting Conservation Scores For Specific Sites
genome
vcf
conservation
function
prediction
updated 9.6 years ago by
Biostar
20 • written 12.0 years ago by
Rubal7
▴ 830
6
votes
3
replies
3.4k
views
Most Appropriate Software Detect Population Specific Structural Variation In Multiple Low-Coverage Genomes?
copynumber
updated 10.0 years ago by
Biostar
20 • written 10.7 years ago by
Rubal7
▴ 830
22
votes
7
replies
13k
views
How To Perform A Fst (Fixation Index) Calculation Over A Vcf File Using A Sliding Window?
vcf
vcftools
updated 10.1 years ago by
Biostar
20 • written 10.9 years ago by
Rubal7
▴ 830
2
votes
3
replies
4.4k
views
Functional Relevance Of Stop Retained Variants?
functional
disease
variation
genome
genomics
updated 10.1 years ago by
Emily
23k • written 10.1 years ago by
Rubal7
▴ 830
4
votes
4
replies
2.9k
views
Simulation Negative Selection
selection
genome
updated 10.1 years ago by
Biostar
20 • written 12.0 years ago by
Rubal7
▴ 830
3
votes
1
reply
3.3k
views
How To Identify If Gene Overlaps Between Studies Are Significant?
overlap
gene
updated 10.1 years ago by
Istvan Albert
100k • written 10.1 years ago by
Rubal7
▴ 830
3
votes
5
replies
2.4k
views
Automated Submission Of Jobs To Ensembl Biomart
ensembl
biomart
genome
updated 10.5 years ago by
Biostar
20 • written 11.7 years ago by
Rubal7
▴ 830
6
votes
3
replies
14k
views
Vcftools Weir-Fst-Pop
vcf
vcftools
genome
fst
updated 10.8 years ago by
Biostar
20 • written 11.9 years ago by
Rubal7
▴ 830
8
votes
3
replies
5.0k
views
Filtering Vcf File For Fixed Substitutions
vcf
filter
allele
frequency
updated 11.3 years ago by
Adam
★ 1.0k • written 11.3 years ago by
Rubal7
▴ 830
2
votes
5
replies
2.7k
views
Getting Transcipt Variants For Specific Genes In Rna-Seq Data
rna
transcript
sequence
updated 11.5 years ago by
JC
13k • written 11.5 years ago by
Rubal7
▴ 830
3
votes
4
replies
4.8k
views
How To Look For Enrichment Of Gwas Snps In List Of Regions
gwas
enrichment
genome
updated 11.6 years ago by
Khader Shameer
18k • written 11.6 years ago by
Rubal7
▴ 830
8
votes
4
replies
4.3k
views
Iterating With Vcf Tools
vcf
genome
updated 11.9 years ago by
Alex Reynolds
35k • written 11.9 years ago by
Rubal7
▴ 830
14
votes
10
replies
15k
views
6 follow
Retrieve Subset Positions Vcf File
vcf
tabix
updated 2.2 years ago by
Ram
43k • written 11.9 years ago by
Rubal7
▴ 830
1
vote
2
replies
2.4k
views
Map Of Local Mutation Rate Variation In Human Genome
genome
mutation
local
map
11.9 years ago by
Rubal7
▴ 830
4
votes
4
replies
3.1k
views
Higher Coverage In Introns Than Exons?
genome
coverage
sequencing
12.0 years ago by
Rubal7
▴ 830
2
votes
5
replies
2.8k
views
Functional Enrichment With Large Numbers Of Genes
enrichment
function
genome
pathway
updated 12.0 years ago by
tiagoantao
▴ 690 • written 12.0 years ago by
Rubal7
▴ 830
1
vote
3
replies
1.8k
views
Sfscode- Specifying Inital Allele Frequencies
simulation
genome
updated 12.0 years ago by
rh7967
▴ 10 • written 12.0 years ago by
Rubal7
▴ 830
27 results • Page
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