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questions
0
votes
0
replies
184
views
reference-free assembly error assessment tools
assembly
4 months ago by
lagartija
▴ 160
0
votes
0
replies
237
views
Proteomics : imputation of missing values in all replicates
proteomics
7 months ago by
lagartija
▴ 160
0
votes
0
replies
462
views
Rooting a tree based on taxonomy of species
phylogeny
2.3 years ago by
lagartija
▴ 160
1
vote
1
reply
585
views
blastn of complement or reverse strand
blast
updated 2.5 years ago by
Istvan Albert
101k • written 2.5 years ago by
lagartija
▴ 160
3
votes
4
replies
1.5k
views
act comparaison of 2 genomes - problem with the blast output
assembly
software error
updated 3.0 years ago by
WB
• 0 • written 6.4 years ago by
lagartija
▴ 160
0
votes
2
replies
881
views
topGO : compare 2 distinct groups
topGO
2.3 years ago by
lagartija
▴ 160
1
vote
2
replies
606
views
Cytoscape - knowing and exporting layouts
Cytoscape
3.3 years ago by
lagartija
▴ 160
0
votes
0
replies
629
views
Translate evolutionary model for MrBayes
phylogeny
updated 3.6 years ago by
Biostar
20 • written 3.7 years ago by
lagartija
▴ 160
1
vote
1
reply
1.3k
views
cytoscape : edge weighted layout
cytoscape
updated 3.6 years ago by
scooter
▴ 620 • written 3.7 years ago by
lagartija
▴ 160
1
vote
1
reply
1.1k
views
Metagenomics - Functional analysis
metagenomics
megan
3.9 years ago by
lagartija
▴ 160
1
vote
2
replies
1.3k
views
optimal number of clusters from distance matrix input
clustering
R
updated 4.0 years ago by
Kevin Blighe
88k • written 4.0 years ago by
lagartija
▴ 160
3
votes
6
replies
1.1k
views
How to find out if contig size is limited by repeats
Assembly
metagenomics
4.2 years ago by
lagartija
▴ 160
0
votes
0
replies
606
views
Download IMG or other large metagenomic datasets
metagenomics
4.5 years ago by
lagartija
▴ 160
0
votes
2
replies
745
views
hmmsearch on global metagenomic datasets
metagenomics
updated 4.5 years ago by
Biostar
20 • written 4.5 years ago by
lagartija
▴ 160
1
vote
3
replies
972
views
small representative database
taxonomy
data
genomes
proteomes
updated 4.6 years ago by
Mensur Dlakic
★ 28k • written 4.6 years ago by
lagartija
▴ 160
1
vote
5
replies
3.1k
views
running BUSCO on unknown genomes ?
assembly
updated 4.9 years ago by
kabir.deb
▴ 90 • written 5.6 years ago by
lagartija
▴ 160
1
vote
1
reply
3.2k
views
Understanding assembly graphs
assembly
gfa
updated 5.0 years ago by
Juke34
8.8k • written 5.0 years ago by
lagartija
▴ 160
1
vote
1
reply
1.9k
views
alternative to mauve : multiple alignments of whole genomes
alignment
genome
5.0 years ago by
lagartija
▴ 160
0
votes
0
replies
718
views
test significance of species abundance in metagenomic data
metagenomics
ecology
5.3 years ago by
lagartija
▴ 160
3
votes
4
replies
3.9k
views
Hybrid assembly using MinION data + correction with Illumina. Which strategy to adopt ?
assembly
updated 5.4 years ago by
predeus
★ 2.0k • written 6.5 years ago by
lagartija
▴ 160
0
votes
2
replies
2.0k
views
psiblast to get pssm. How to get a pssm from a multiple alignment ?
pssm
updated 5.4 years ago by
Biostar
20 • written 5.5 years ago by
lagartija
▴ 160
0
votes
2
replies
902
views
Mapping of metagenomic reads on genomes - length criteria ?
mapping
5.5 years ago by
lagartija
▴ 160
0
votes
0
replies
875
views
pssm for rpsblast
domains
5.6 years ago by
lagartija
▴ 160
0
votes
1
reply
1.4k
views
masking low complexity regions in a protein database for BLAST
blast
5.7 years ago by
lagartija
▴ 160
1
vote
1
reply
901
views
Functionnal annotation of metagenomes
metagenomics
protein function
5.7 years ago by
lagartija
▴ 160
1
vote
2
replies
1.0k
views
GenBank ID to GO term
annotation
metagenomics
updated 5.7 years ago by
Benn
8.3k • written 5.7 years ago by
lagartija
▴ 160
5
votes
3
replies
1.8k
views
Annotation of assembled metagenomic data
metagenomics
taxonomy
updated 5.7 years ago by
Juke34
8.8k • written 5.7 years ago by
lagartija
▴ 160
3
votes
6
replies
1.2k
views
use blast+ to blast fine domains in proteins
alignment
6.3 years ago by
lagartija
▴ 160
2
votes
4
replies
5.8k
views
How to annotate nodes in Cytoscape
software error
6.3 years ago by
lagartija
▴ 160
0
votes
10
replies
2.1k
views
new using pore tools. extract fast
next-gen
6.4 years ago by
lagartija
▴ 160
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