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Comment: C: How to find if our enhancer gene pair fall within TAD
3.9 years ago by rohitsatyam102 ▴ 870
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Answer: A: Best way to assemble a genome with a reference
3.9 years ago by rohitsatyam102 ▴ 870
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Answer: A: Correlate ChIP-seq to gene expression
3.9 years ago by rohitsatyam102 ▴ 870
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Comment: C: How to find if our enhancer gene pair fall within TAD
3.9 years ago by rohitsatyam102 ▴ 870
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23k
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Comment: C: Where to download blacklisted regions?
3.9 years ago by rohitsatyam102 ▴ 870
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6
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1.2k
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How to find if our enhancer gene pair fall within TAD
sequencing R genome gene
updated 3.9 years ago by ▴ 680 • written 3.9 years ago by ▴ 870
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1
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7.3k
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Comment: C: Duplicate/identical reads in fastq file
3.9 years ago by rohitsatyam102 ▴ 870
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18k
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Comment: C: Markduplicates: Value Was Put Into Pairinfomap More Than Once
3.9 years ago by rohitsatyam102 ▴ 870
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3.5k
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Comment: C: my fastq file have two same reads' name
3.9 years ago by rohitsatyam102 ▴ 870
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0
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7.3k
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Comment: C: Duplicate/identical reads in fastq file
3.9 years ago by rohitsatyam102 ▴ 870
0
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1
reply
18k
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Comment: C: Markduplicates: Value Was Put Into Pairinfomap More Than Once
3.9 years ago by rohitsatyam102 ▴ 870
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1
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5.5k
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Comment: C: Paired reads positions in FASTQ files
3.9 years ago by rohitsatyam102 ▴ 870
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1
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5.5k
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Comment: C: Paired reads positions in FASTQ files
3.9 years ago by rohitsatyam102 ▴ 870
5
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2
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1.8k
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What does minoverlap = 1L means?
gene R annotatr
updated 3.9 years ago by 82k • written 3.9 years ago by ▴ 870
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1
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1.4k
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Comment: C: Confusion regarding 7th and 8th column of FANTOM5 Enhancer Coordinates BED File
3.9 years ago by rohitsatyam102 ▴ 870
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0
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639
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Comment: C: Genomics regions that common to atleast 10 cell types
4.0 years ago by rohitsatyam102 ▴ 870
2
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3
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639
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Genomics regions that common to atleast 10 cell types
bedtools bedops genome bed sequence
updated 14 months ago by 44k • written 4.0 years ago by ▴ 870
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1
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1.9k
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Comment: C: DEXSeq aggregates two different genes together
4.0 years ago by rohitsatyam102 ▴ 870
1
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1
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1.9k
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Comment: C: DEXSeq aggregates two different genes together
4.0 years ago by rohitsatyam102 ▴ 870
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1
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2.7k
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Comment: C: hg38 Ig regions
4.0 years ago by rohitsatyam102 ▴ 870
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6.0k
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Comment: C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
4.0 years ago by rohitsatyam102 ▴ 870
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0
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6.0k
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Comment: C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
4.0 years ago by rohitsatyam102 ▴ 870
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2
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6.0k
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Comment: C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
4.0 years ago by rohitsatyam102 ▴ 870
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0
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5.9k
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Comment: C: Strange MA plot from DESeq2
4.0 years ago by rohitsatyam102 ▴ 870
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2
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1.9k
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Answer: C: DEXSeq aggregates two different genes together
4.0 years ago by rohitsatyam102 ▴ 870
5
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7
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1.9k
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DEXSeq aggregates two different genes together
dexseq RNA-Seq rna-seq
updated 4.0 years ago by 88k • written 4.0 years ago by ▴ 870
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0
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1.1k
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Comment: C: DEXSeq gives most of the reads as "_empty"
4.0 years ago by rohitsatyam102 ▴ 870
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0
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1.2k
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Comment: C: TERF2 shRNA silencing is visible in WB and qPCR but not reflected in PE RNASeq
4.0 years ago by rohitsatyam102 ▴ 870
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0
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1.2k
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Comment: C: TERF2 shRNA silencing is visible in WB and qPCR but not reflected in PE RNASeq
4.0 years ago by rohitsatyam102 ▴ 870
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2
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1.2k
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Comment: C: TERF2 shRNA silencing is visible in WB and qPCR but not reflected in PE RNASeq
4.0 years ago by rohitsatyam102 ▴ 870
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2.5k
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Comment: C: Calculating and confirming shRNA knockdown gene from RNA-Seq?
4.0 years ago by rohitsatyam102 ▴ 870
6
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7
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1.2k
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TERF2 shRNA silencing is visible in WB and qPCR but not reflected in PE RNASeq
RNA-Seq rna-seq genome next-gen
4.0 years ago by rohitsatyam102 ▴ 870
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1
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2.5k
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Comment: A: Calculating and confirming shRNA knockdown gene from RNA-Seq?
4.0 years ago by rohitsatyam102 ▴ 870
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0
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3.0k
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Comment: C: Some problems with DEXSEQ analyse
4.0 years ago by rohitsatyam102 ▴ 870
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0
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1.9k
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Comment: C: error in prepare annotation script DEXseq
4.0 years ago by rohitsatyam102 ▴ 870
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1
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2.9k
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Comment: C: How do I get the read counts for a specific exon
4.0 years ago by rohitsatyam102 ▴ 870
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0
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6.9k
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Comment: C: How to make a plot with gProfileR results?
4.1 years ago by rohitsatyam102 ▴ 870
1
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0
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15k
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Answer: A: Retrieve GFF3 file from ncbi
4.1 years ago by rohitsatyam102 ▴ 870
1
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3
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1.4k
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Confusion regarding 7th and 8th column of FANTOM5 Enhancer Coordinates BED File
enhancer genome alignment
4.1 years ago by rohitsatyam102 ▴ 870
0
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0
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3.8k
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Comment: C: RNAfold installation error
4.2 years ago by rohitsatyam102 ▴ 870
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0
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24k
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Comment: C: What Is A .Ptt File And How It Is Created?
4.2 years ago by rohitsatyam102 ▴ 870
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1.6k
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Comment: C: How to correctly generate alignment Stat in RNA-Seq
4.3 years ago by rohitsatyam102 ▴ 870
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1
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1.6k
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Comment: C: How to correctly generate alignment Stat in RNA-Seq
4.3 years ago by rohitsatyam102 ▴ 870
1
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5
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1.6k
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How to correctly generate alignment Stat in RNA-Seq
RNA-Seq sequencing alignment rna-seq
updated 4.3 years ago by ▴ 60 • written 4.3 years ago by ▴ 870
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0
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4.5k
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Answer: A: Calculate percentage mapped reads from Bowtie2/RSEM
4.3 years ago by rohitsatyam102 ▴ 870
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1
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1.1k
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Comment: C: Ambiguous fields in FANTOM 5 Enhancer_TSS_association.bed file
4.4 years ago by rohitsatyam102 ▴ 870
2
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3
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1.1k
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Ambiguous fields in FANTOM 5 Enhancer_TSS_association.bed file
RNA-Seq gene genome
updated 4.4 years ago by ▴ 600 • written 4.4 years ago by ▴ 870
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0
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6.8k
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Comment: C: Find consensus overlap between many bed files
4.4 years ago by rohitsatyam102 ▴ 870
1
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2
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1.0k
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Sorting the BEd File
genome gene next-gen
updated 4.5 years ago by 20 • written 4.5 years ago by ▴ 870
0
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0
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584
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From where to get Sub-telomeric Region Coordinates/ sequences for each chromosome
genome gene assembly Assembly ChIP-Seq
4.5 years ago by rohitsatyam102 ▴ 870
224 results • Page 4 of 5
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