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Comment: Comment: Filtering VCF based on codon-transcript
5 weeks ago by avelarbio46 ▴ 30
0
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1
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776
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Comment: Comment: Filtering VCF based on codon-transcript
6 weeks ago by avelarbio46 ▴ 30
0
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1
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776
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Comment: Comment: Filtering VCF based on codon-transcript
6 weeks ago by avelarbio46 ▴ 30
0
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0
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776
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Comment: Comment: Filtering VCF based on codon-transcript
7 weeks ago by avelarbio46 ▴ 30
0
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1
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776
views
Comment: Comment: Filtering VCF based on codon-transcript
7 weeks ago by avelarbio46 ▴ 30
0
votes
11
replies
776
views
Filtering VCF based on codon-transcript
vcf bcftools
updated 5 weeks ago by ★ 2.1k • written 7 weeks ago by ▴ 30
0
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0
replies
200
views
Calculate mean DP4 in a multisample vcf
dp4 vcf bcftools
updated 11 weeks ago by 43k • written 11 weeks ago by ▴ 30
0
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1
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14k
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Comment: Comment: How to get sample names and genotype for SNP in multi-sample VCF file
6 months ago by avelarbio46 ▴ 30
0
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1
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14k
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Comment: Comment: How to get sample names and genotype for SNP in multi-sample VCF file
6 months ago by avelarbio46 ▴ 30
0
votes
1
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14k
views
Comment: Comment: How to get sample names and genotype for SNP in multi-sample VCF file
6 months ago by avelarbio46 ▴ 30
0
votes
0
replies
302
views
Adding custom annotation to VEP output VCF
bcftools VEP vcf
6 months ago by avelarbio46 ▴ 30
4
votes
4
replies
636
views
Filtering VCF to divide with equal sizes
bcftools vcf
updated 7 months ago by 43k • written 7 months ago by ▴ 30
0
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1
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636
views
Answer: Answer: Filtering VCF to divide with equal sizes
updated 7 months ago by 43k • written 7 months ago by ▴ 30
0
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0
replies
1.5k
views
Comment: Comment: Converting custom VCF to standard VCF
7 months ago by avelarbio46 ▴ 30
5
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12
replies
1.5k
views
Converting custom VCF to standard VCF
VCF
7 months ago by avelarbio46 ▴ 30
1
vote
4
replies
695
views
Finding Unique values on specific INFO field of the VCF file (dbNSFP, vep annotated multisample VCF)
bcftools filter vep vcf
7 months ago by avelarbio46 ▴ 30
1
vote
0
replies
695
views
Answer: Answer: Finding Unique values on specific INFO field of the VCF file (dbNSFP, vep annota
7 months ago by avelarbio46 ▴ 30
0
votes
0
replies
695
views
Comment: Comment: Finding Unique values on specific INFO field of the VCF file
7 months ago by avelarbio46 ▴ 30
0
votes
1
reply
1.5k
views
Comment: Comment: Converting custom VCF to standard VCF
7 months ago by avelarbio46 ▴ 30
0
votes
1
reply
1.5k
views
Answer: Answer: Converting custom VCF to standard VCF
7 months ago by avelarbio46 ▴ 30
0
votes
1
reply
1.5k
views
Comment: Comment: Converting custom VCF to standard VCF
8 months ago by avelarbio46 ▴ 30
0
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0
replies
1.5k
views
Comment: Comment: Converting custom VCF to standard VCF
8 months ago by avelarbio46 ▴ 30
1
vote
3
replies
1.3k
views
Converting dbSNP VCF to work with RefSeq chromossome ID
NCBI dbSNP RefSeq
updated 9 months ago by ▴ 170 • written 13 months ago by ▴ 30
1
vote
1
reply
787
views
Filtering VCF by specific tag in INFO field
bcftools vcf
updated 10 months ago by 43k • written 13 months ago by ▴ 30
5
votes
2
replies
1.3k
views
How to create a new gene signature from RNAseq data
gene RNAseq signature
updated 21 months ago by 82k • written 21 months ago by ▴ 30
0
votes
1
reply
681
views
Filtering VCF variants based on txt file with variants CHROM, POS and ID
VCF
updated 24 months ago by 43k • written 24 months ago by ▴ 30
0
votes
1
reply
834
views
Running STAR-SEQR with star outputs
STAR-SEQR STAR fusion RNAseq
updated 2.7 years ago by 141k • written 2.7 years ago by ▴ 30
0
votes
1
reply
744
views
GSEA and over-representation analysis of many genes
GSEA DE ORA RNAseq
updated 2.4 years ago by ▴ 10 • written 2.7 years ago by ▴ 30
1
vote
1
reply
916
views
How can I compare the similarities of two transcriptomes?
transcriptome similarity rnaseq
updated 2.9 years ago by ★ 1.0k • written 2.9 years ago by ▴ 30
0
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0
replies
1.9k
views
Comment: Comment: Can't count features with featurecount
3.0 years ago by avelarbio46 ▴ 30
0
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1
reply
1.9k
views
Comment: Comment: Can't count features with featurecount
3.0 years ago by avelarbio46 ▴ 30
0
votes
1
reply
1.9k
views
Comment: Comment: Can't count features with featurecount
3.0 years ago by avelarbio46 ▴ 30
2
votes
6
replies
1.9k
views
Can't count features with featurecount
RNAseq featurecounts
3.0 years ago by avelarbio46 ▴ 30
0
votes
0
replies
3.4k
views
Comment: Comment: Bash loop for bbduk
3.1 years ago by avelarbio46 ▴ 30
9
votes
11
replies
3.4k
views
Bash loop for bbduk
bash bbduk
updated 3.1 years ago by 21k • written 3.1 years ago by ▴ 30
0
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0
replies
3.4k
views
Answer: Answer: Bash loop for bbduk
3.1 years ago by avelarbio46 ▴ 30
0
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2
replies
3.4k
views
Comment: Comment: Bash loop for bbduk
3.1 years ago by avelarbio46 ▴ 30
0
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0
replies
3.4k
views
Comment: Comment: Bash loop for bbduk
3.1 years ago by avelarbio46 ▴ 30
0
votes
0
replies
3.4k
views
Comment: Comment: Bash loop for bbduk
3.1 years ago by avelarbio46 ▴ 30
0
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1
reply
1.1k
views
Comment: C: Removing batch effects
3.1 years ago by avelarbio46 ▴ 30
0
votes
3
replies
1.1k
views
Removing batch effects
batch-effect RNA-Seq
updated 3.1 years ago by 14k • written 3.1 years ago by ▴ 30
0
votes
0
replies
1.4k
views
Comment: C: STAR-fusion on galaxy
3.2 years ago by avelarbio46 ▴ 30
0
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1
reply
1.4k
views
Comment: C: STAR-fusion on galaxy
3.2 years ago by avelarbio46 ▴ 30
0
votes
4
replies
1.4k
views
STAR-fusion on galaxy
Galaxy RNA-Seq STAR-fusion
3.2 years ago by avelarbio46 ▴ 30
0
votes
1
reply
22k
views
Comment: C: GO analysis using topGO
3.3 years ago by avelarbio46 ▴ 30
2
votes
1
reply
656
views
Gene size correction for small RNA
small RNA miRNA RNA-Seq normalization
updated 3.3 years ago by ★ 5.8k • written 3.3 years ago by ▴ 30
2
votes
2
replies
1.2k
views
How to trim reads when I'm not sure where they are?
RNA-Seq cutadapt illumina
updated 3.3 years ago by ★ 1.2k • written 3.3 years ago by ▴ 30
1
vote
1
reply
3.3k
views
Comment: C: Best ubuntu version for bioinformatics?
3.4 years ago by avelarbio46 ▴ 30
25
votes
13
replies
3.3k
views
6 follow
Best ubuntu version for bioinformatics?
ubuntu
updated 3.4 years ago by ★ 27k • written 3.4 years ago by ▴ 30
0
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1
reply
1.9k
views
Comment: C: Small RNAseq Dataset to test scripts
3.4 years ago by avelarbio46 ▴ 30
64 results • Page 1 of 2
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