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Diferences between TCGAbiolinks and cBioportal
R TCGAbiolinks cBioportal
updated 16 months ago by ★ 1.2k • written 16 months ago by ▴ 40
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0
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424
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Genes present in each GO term TCGAvisualize_EAbarplot
TCGAvisualize_EAbarplot R TCGAbiolinks
21 months ago by jomagrax ▴ 40
1
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1
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2.3k
views
Which RcisTarget databases to use in SCENIC
single-cell SCENIC R
updated 2.4 years ago by ▴ 10 • written 2.4 years ago by ▴ 40
1
vote
2
replies
847
views
Automatize extraction of a VCF column value
vcf bash
2.7 years ago by jomagrax ▴ 40
1
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0
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847
views
Answer: Answer: Automatize extraction of a VCF column value
2.7 years ago by jomagrax ▴ 40
4
votes
1
reply
642
views
Copy a column of a VCF to another column within file
vcf bash
updated 2.7 years ago by ▴ 930 • written 2.7 years ago by ▴ 40
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0
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922
views
Comment: Comment: Automatize alignment and sorting
2.8 years ago by jomagrax ▴ 40
6
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3
replies
922
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Automatize alignment and sorting
bash aligment bwa samtools
2.8 years ago by jomagrax ▴ 40
1
vote
1
reply
704
views
Can I Illumina sequence with a polymerase that leaves -da overgangs?
sequencing illumina
updated 3.9 years ago by 87k • written 3.9 years ago by ▴ 40
0
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0
replies
467
views
Can I differenciate between two variants of the same plant spicies with NGS?
snp genome
4.1 years ago by jomagrax ▴ 40
0
votes
1
reply
950
views
How to download NCBI nulceotide collection database
ncbi
updated 2.0 years ago by 45k • written 4.3 years ago by ▴ 40
1
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0
replies
902
views
Answer: A: How to perform GO enrichment analysis on sRNA-seq
4.8 years ago by jomagrax ▴ 40
1
vote
1
reply
902
views
How to perform GO enrichment analysis on sRNA-seq
GO RNA-Seq
4.8 years ago by jomagrax ▴ 40
1
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4
replies
1.6k
views
Which one of these sRNA prediction tools is better?
RNA-Seq srna
5.0 years ago by jomagrax ▴ 40
0
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1
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1.6k
views
Answer: A: Which one of these sRNA prediction tools is better?
5.0 years ago by jomagrax ▴ 40
1
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0
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5.8k
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Comment: C: Mirdeep2 Error: FASTA reads file is not in accordance with the fasta format spec
5.1 years ago by jomagrax ▴ 40
1
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0
replies
1.2k
views
Answer: A: mirdeep2 mapped reference error
5.1 years ago by jomagrax ▴ 40
1
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1
reply
1.2k
views
mirdeep2 mapped reference error
RNA-Seq mirdeep2
5.1 years ago by jomagrax ▴ 40
2
votes
15
replies
4.7k
views
How to upgrade R version in ubuntu?
R software error
5.2 years ago by jomagrax ▴ 40
0
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0
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4.7k
views
Answer: A: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
0
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2
replies
4.7k
views
Comment: C: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
0
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1
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4.7k
views
Comment: C: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
0
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1
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4.7k
views
Comment: C: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
0
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0
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4.7k
views
Comment: C: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
1
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2
replies
4.7k
views
Comment: C: How to upgrade R version in ubuntu?
5.2 years ago by jomagrax ▴ 40
0
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1
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2.0k
views
Trouble installing mapper.pl from mirdeep2
mirdeep2 RNA-Seq cap-mirseq
5.2 years ago by jomagrax ▴ 40
0
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0
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2.0k
views
Answer: A: Trouble installing mapper.pl from mirdeep2
5.2 years ago by jomagrax ▴ 40
0
votes
2
replies
1.8k
views
ImportError: No module named cutadapt.scripts
rna-seq cutadapt cap-mirseq
5.2 years ago by jomagrax ▴ 40
0
votes
0
replies
832
views
Comment: C: How to define a path to the HTSeq python packages
5.2 years ago by jomagrax ▴ 40
0
votes
1
reply
832
views
How to define a path to the HTSeq python packages
RNA-Seq CAP-miRSEQ Python
5.2 years ago by jomagrax ▴ 40
0
votes
1
reply
728
views
CAP-miRSeq installation error miRDeep2
miRDeep2 CAP-miRSeq
5.2 years ago by jomagrax ▴ 40
0
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1
reply
1.2k
views
ViennaRNA-1.8.4 install error CAP-miRSeq
rna-seq software error CAP-miRSeq ViennaRNA
5.2 years ago by jomagrax ▴ 40
2
votes
2
replies
1.1k
views
Excessive data loss after trimming
genome RNA-Seq
5.2 years ago by jomagrax ▴ 40
0
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0
replies
866
views
Comment: C: Is It safe to convert .bam to .fastq and re-do the analysis?
5.2 years ago by jomagrax ▴ 40
3
votes
2
replies
866
views
Is It safe to convert .bam to .fastq and re-do the analysis?
alignment rna-seq
5.2 years ago by jomagrax ▴ 40
0
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0
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3.0k
views
Comment: C: Are my .bam files ok?
5.2 years ago by jomagrax ▴ 40
3
votes
4
replies
3.0k
views
Are my .bam files ok?
alignment
updated 5.2 years ago by 150k • written 5.2 years ago by ▴ 40
2
votes
1
reply
3.4k
views
How to join DESeq2 object "res" to the gene annotation with dplyr?
R RNA-Seq
updated 6.1 years ago by ★ 5.2k • written 6.1 years ago by ▴ 40
0
votes
1
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3.2k
views
TopGO Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
RNA-Seq R TopGO
6.3 years ago by jomagrax ▴ 40
0
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1
reply
2.2k
views
Comment: C: How to compare several ASCII files in LINUX
6.4 years ago by jomagrax ▴ 40
0
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1
reply
2.2k
views
Comment: C: How to compare several ASCII files in LINUX
updated 6.4 years ago by 45k • written 6.4 years ago by ▴ 40
0
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1
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2.2k
views
Comment: C: How to compare several ASCII files in LINUX
6.4 years ago by jomagrax ▴ 40
0
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1
reply
2.2k
views
Comment: C: How to compare several ASCII files in LINUX
6.4 years ago by jomagrax ▴ 40
13
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15
replies
2.2k
views
How to compare several ASCII files in LINUX
rna-seq LINUX
6.4 years ago by jomagrax ▴ 40
0
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2
replies
2.2k
views
Comment: C: How to compare several ASCII files in LINUX
6.4 years ago by jomagrax ▴ 40
0
votes
1
reply
2.2k
views
Comment: C: How to compare several ASCII files in LINUX
6.4 years ago by jomagrax ▴ 40
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