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Comment: Comment: Decision of Random Effect and Random Slope in rare cases
20 months ago by manjumoorthy95 ▴ 60
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2
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683
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Decision of Random Effect and Random Slope in rare cases
LMM Model
20 months ago by manjumoorthy95 ▴ 60
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2
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4.1k
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Comment: Comment: TCGA Sample barcode
4.3 years ago by manjumoorthy95 ▴ 60
2
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4
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4.1k
views
TCGA Sample barcode
Tumor Barcode Normal TCGA
updated 4.3 years ago by 6.1k • written 4.3 years ago by ▴ 60
6
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5
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1.6k
views
paired end data with varying read length
RNA-Seq illumina insert size
updated 4.6 years ago by • 0 • written 6.1 years ago by ▴ 60
3
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3
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3.8k
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Color key in heatmap.2 function in R
R
updated 4.7 years ago by 20 • written 5.3 years ago by ▴ 60
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1
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3.8k
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Comment: C: Color key in heatmap.2 function in R
updated 5.3 years ago by 45k • written 5.3 years ago by ▴ 60
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0
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987
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dispersionPlot in cummeRbund package
rna-seq cummeRbund dispersionPlot dispersion
6.1 years ago by manjumoorthy95 ▴ 60
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0
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4.8k
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Comment: C: How to interpret reference homozygous genotype in the VCF file generated by GATK
updated 6.3 years ago by 45k • written 6.4 years ago by ▴ 60
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2
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1.5k
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genotype field in vcf file
SNP vcf genotype NGS
updated 6.3 years ago by 20 • written 6.4 years ago by ▴ 60
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0
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2.0k
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Comment: C: Phylogenomic tree construction
6.4 years ago by manjumoorthy95 ▴ 60
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0
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2.0k
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Comment: C: Phylogenomic tree construction
6.4 years ago by manjumoorthy95 ▴ 60
2
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6
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2.0k
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Phylogenomic tree construction
phylogenomics
updated 6.4 years ago by ★ 1.9k • written 6.4 years ago by ▴ 60
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1
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2.0k
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Comment: C: Phylogenomic tree construction
6.4 years ago by manjumoorthy95 ▴ 60
0
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0
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1.3k
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Fishers test for cog analysis
p value fishers test cog
6.4 years ago by manjumoorthy95 ▴ 60
0
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0
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1.8k
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Comment: C: heterozygous genotype in bacterial snp calling
6.4 years ago by manjumoorthy95 ▴ 60
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2
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1.8k
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heterozygous genotype in bacterial snp calling
snp haploid
updated 6.4 years ago by 15k • written 6.4 years ago by ▴ 60
0
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1
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3.6k
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Comment: C: Heatmap.2 dendrogram generation
6.4 years ago by manjumoorthy95 ▴ 60
1
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4
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3.6k
views
Heatmap.2 dendrogram generation
heatmap.2 R hclust
updated 6.4 years ago by 45k • written 6.4 years ago by ▴ 60
0
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0
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6.2k
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Comment: C: PCA analysis with R
6.4 years ago by manjumoorthy95 ▴ 60
0
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1
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6.2k
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Comment: C: PCA analysis with R
6.4 years ago by manjumoorthy95 ▴ 60
7
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11
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6.2k
views
PCA analysis with R
R PCA ggfortify autoplot
updated 6.4 years ago by 89k • written 6.4 years ago by ▴ 60
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1
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6.2k
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Comment: C: PCA analysis with R
6.4 years ago by manjumoorthy95 ▴ 60
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0
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6.2k
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Comment: C: PCA analysis with R
6.4 years ago by manjumoorthy95 ▴ 60
0
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0
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4.2k
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Comment: C: Genotype phased and unphased
6.4 years ago by manjumoorthy95 ▴ 60
0
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1
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4.2k
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Comment: C: Genotype phased and unphased
6.5 years ago by manjumoorthy95 ▴ 60
0
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2
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4.2k
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Comment: C: Genotype phased and unphased
6.5 years ago by manjumoorthy95 ▴ 60
0
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0
replies
1.1k
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Snpeff for predicting snp effect
SNP snpeff
6.5 years ago by manjumoorthy95 ▴ 60
0
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0
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4.2k
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Comment: C: Genotype phased and unphased
6.5 years ago by manjumoorthy95 ▴ 60
0
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1
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4.2k
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Comment: C: Genotype phased and unphased
6.5 years ago by manjumoorthy95 ▴ 60
2
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9
replies
4.2k
views
Genotype phased and unphased
genotype phasing vcf SNP
updated 6.5 years ago by 166k • written 6.5 years ago by ▴ 60
0
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2
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5.8k
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Comment: C: How to give merged reads as input in spades
6.7 years ago by manjumoorthy95 ▴ 60
5
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8
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5.8k
views
How to give merged reads as input in spades
assembly spades merged de novo
updated 6.7 years ago by ★ 3.0k • written 6.7 years ago by ▴ 60
0
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0
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5.8k
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Comment: C: How to give merged reads as input in spades
6.7 years ago by manjumoorthy95 ▴ 60
0
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0
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5.8k
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Comment: C: How to give merged reads as input in spades
6.7 years ago by manjumoorthy95 ▴ 60
0
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0
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1.8k
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Comment: C: interpreting local blast output
6.7 years ago by manjumoorthy95 ▴ 60
2
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2
replies
1.8k
views
interpreting local blast output
localBlast alignment denovo
updated 6.7 years ago by 22k • written 6.7 years ago by ▴ 60
0
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0
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4.2k
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Comment: C: Reads not getting mapped to reference genome
6.7 years ago by manjumoorthy95 ▴ 60
0
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0
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2.6k
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Comment: C: Extracting contaminated reads from the sequenced data
6.7 years ago by manjumoorthy95 ▴ 60
0
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0
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2.6k
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Comment: C: Extracting contaminated reads from the sequenced data
6.7 years ago by manjumoorthy95 ▴ 60
0
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0
replies
4.2k
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Comment: C: Reads not getting mapped to reference genome
6.7 years ago by manjumoorthy95 ▴ 60
0
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6
replies
4.2k
views
Reads not getting mapped to reference genome
mapping Bowtie de novo assembly whole genome
6.7 years ago by manjumoorthy95 ▴ 60
0
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1
reply
4.2k
views
Comment: C: Reads not getting mapped to reference genome
6.7 years ago by manjumoorthy95 ▴ 60
5
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7
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2.6k
views
Extracting contaminated reads from the sequenced data
genome sequencing extraction illumina
updated 6.7 years ago by 154k • written 6.7 years ago by ▴ 60
0
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0
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2.6k
views
Comment: C: Extracting contaminated reads from the sequenced data
6.7 years ago by manjumoorthy95 ▴ 60
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