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0
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1.1k
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Comment: Comment: TCGA Sample barcode
21 months ago by manjumoorthy95 ▴ 60
2
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4
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1.1k
views
TCGA Sample barcode
Tumor Barcode Normal TCGA
updated 21 months ago by 5.9k • written 21 months ago by ▴ 60
6
votes
5
replies
969
views
paired end data with varying read length
RNA-Seq illumina insert size
updated 2.0 years ago by • 0 • written 3.5 years ago by ▴ 60
3
votes
3
replies
2.9k
views
Color key in heatmap.2 function in R
R
updated 2.2 years ago by 20 • written 2.8 years ago by ▴ 60
0
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1
reply
2.9k
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Comment: C: Color key in heatmap.2 function in R
updated 2.8 years ago by 38k • written 2.8 years ago by ▴ 60
0
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0
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629
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dispersionPlot in cummeRbund package
rna-seq cummeRbund dispersionPlot dispersion
3.6 years ago by manjumoorthy95 ▴ 60
0
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0
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3.8k
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Comment: C: How to interpret reference homozygous genotype in the VCF file generated by GATK
updated 3.8 years ago by 38k • written 3.9 years ago by ▴ 60
0
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2
replies
1.1k
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genotype field in vcf file
SNP vcf genotype NGS
updated 3.8 years ago by 20 • written 3.9 years ago by ▴ 60
0
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0
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996
views
Comment: C: Phylogenomic tree construction
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
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996
views
Comment: C: Phylogenomic tree construction
3.9 years ago by manjumoorthy95 ▴ 60
2
votes
6
replies
996
views
Phylogenomic tree construction
phylogenomics
updated 3.9 years ago by ★ 1.8k • written 3.9 years ago by ▴ 60
0
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1
reply
996
views
Comment: C: Phylogenomic tree construction
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
replies
981
views
Fishers test for cog analysis
p value fishers test cog
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
replies
1.1k
views
Comment: C: heterozygous genotype in bacterial snp calling
3.9 years ago by manjumoorthy95 ▴ 60
0
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2
replies
1.1k
views
heterozygous genotype in bacterial snp calling
snp haploid
updated 3.9 years ago by 13k • written 3.9 years ago by ▴ 60
0
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1
reply
2.8k
views
Comment: C: Heatmap.2 dendrogram generation
3.9 years ago by manjumoorthy95 ▴ 60
1
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4
replies
2.8k
views
Heatmap.2 dendrogram generation
heatmap.2 R hclust
updated 3.9 years ago by 38k • written 3.9 years ago by ▴ 60
0
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0
replies
4.1k
views
Comment: C: PCA analysis with R
3.9 years ago by manjumoorthy95 ▴ 60
0
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1
reply
4.1k
views
Comment: C: PCA analysis with R
3.9 years ago by manjumoorthy95 ▴ 60
7
votes
11
replies
4.1k
views
PCA analysis with R
R PCA ggfortify autoplot
updated 3.9 years ago by 84k • written 3.9 years ago by ▴ 60
0
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1
reply
4.1k
views
Comment: C: PCA analysis with R
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
replies
4.1k
views
Comment: C: PCA analysis with R
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
replies
2.8k
views
Comment: C: Genotype phased and unphased
3.9 years ago by manjumoorthy95 ▴ 60
0
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1
reply
2.8k
views
Comment: C: Genotype phased and unphased
3.9 years ago by manjumoorthy95 ▴ 60
0
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2
replies
2.8k
views
Comment: C: Genotype phased and unphased
3.9 years ago by manjumoorthy95 ▴ 60
0
votes
0
replies
715
views
Snpeff for predicting snp effect
SNP snpeff
3.9 years ago by manjumoorthy95 ▴ 60
0
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0
replies
2.8k
views
Comment: C: Genotype phased and unphased
3.9 years ago by manjumoorthy95 ▴ 60
0
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1
reply
2.8k
views
Comment: C: Genotype phased and unphased
3.9 years ago by manjumoorthy95 ▴ 60
2
votes
9
replies
2.8k
views
Genotype phased and unphased
genotype phasing vcf SNP
updated 3.9 years ago by 153k • written 3.9 years ago by ▴ 60
0
votes
2
replies
3.6k
views
Comment: C: How to give merged reads as input in spades
4.2 years ago by manjumoorthy95 ▴ 60
5
votes
8
replies
3.6k
views
How to give merged reads as input in spades
assembly spades merged de novo
updated 4.2 years ago by ★ 3.0k • written 4.2 years ago by ▴ 60
0
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0
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3.6k
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Comment: C: How to give merged reads as input in spades
4.2 years ago by manjumoorthy95 ▴ 60
0
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0
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3.6k
views
Comment: C: How to give merged reads as input in spades
4.2 years ago by manjumoorthy95 ▴ 60
0
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0
replies
1.0k
views
Comment: C: interpreting local blast output
4.2 years ago by manjumoorthy95 ▴ 60
2
votes
2
replies
1.0k
views
interpreting local blast output
localBlast alignment denovo
updated 4.2 years ago by 20k • written 4.2 years ago by ▴ 60
0
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0
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2.5k
views
Comment: C: Reads not getting mapped to reference genome
4.2 years ago by manjumoorthy95 ▴ 60
0
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0
replies
1.4k
views
Comment: C: Extracting contaminated reads from the sequenced data
4.2 years ago by manjumoorthy95 ▴ 60
0
votes
0
replies
1.4k
views
Comment: C: Extracting contaminated reads from the sequenced data
4.2 years ago by manjumoorthy95 ▴ 60
0
votes
0
replies
2.5k
views
Comment: C: Reads not getting mapped to reference genome
4.2 years ago by manjumoorthy95 ▴ 60
0
votes
6
replies
2.5k
views
Reads not getting mapped to reference genome
mapping Bowtie de novo assembly whole genome
4.2 years ago by manjumoorthy95 ▴ 60
0
votes
1
reply
2.5k
views
Comment: C: Reads not getting mapped to reference genome
4.2 years ago by manjumoorthy95 ▴ 60
5
votes
7
replies
1.4k
views
Extracting contaminated reads from the sequenced data
genome sequencing extraction illumina
updated 4.2 years ago by 127k • written 4.2 years ago by ▴ 60
0
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0
replies
1.4k
views
Comment: C: Extracting contaminated reads from the sequenced data
4.2 years ago by manjumoorthy95 ▴ 60
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