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how to prepare NGS analysis environment by Docker
Docker NGS RNASeq
updated 3.2 years ago by 89k • written 3.2 years ago by ▴ 120
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0
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1.7k
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Comment: Comment: how to detect non CpG methylation probes ?
4.2 years ago by takoyaki ▴ 120
3
votes
3
replies
5.1k
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How to connect htseq-count to DESeq2?
R RNA-Seq next-gen DEG Mapping
updated 4.2 years ago by ▴ 50 • written 6.2 years ago by ▴ 120
0
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1
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1.7k
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Comment: Comment: how to detect non CpG methylation probes ?
4.2 years ago by takoyaki ▴ 120
3
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4
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1.7k
views
how to detect non CpG methylation probes ?
DNAmethylation methylation infinium450k microarray minfi R
4.2 years ago by takoyaki ▴ 120
0
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0
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3.1k
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Comment: Comment: Is number after "LOC" genes equal to its Entrez id ?
4.5 years ago by takoyaki ▴ 120
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0
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3.1k
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Comment: Comment: Is number after "LOC" genes equal to its Entrez id ?
4.5 years ago by takoyaki ▴ 120
0
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0
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3.1k
views
Comment: Comment: Is number after "LOC" genes equal to its Entrez id ?
4.5 years ago by takoyaki ▴ 120
4
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6
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3.1k
views
Is number after "LOC" genes equal to its Entrez id ?
NCBI gene LOC
4.5 years ago by takoyaki ▴ 120
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1
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2.6k
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Comment: C: conda installation error in hypo
5.3 years ago by takoyaki ▴ 120
3
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3
replies
2.6k
views
conda installation error in hypo
anaconda sequencing assembly longread hypo
updated 5.3 years ago by 105k • written 5.3 years ago by ▴ 120
2
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0
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1.9k
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How to interpret DEGs of DESeq2 in comparing more than two groups?
DESeq2 DEGs RNA-Seq R
5.3 years ago by takoyaki ▴ 120
0
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0
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1.2k
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Comment: C: How to extract FASTA file from header list ?
5.4 years ago by takoyaki ▴ 120
2
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2
replies
1.2k
views
How to extract FASTA file from header list ?
next-gen sequence gene
updated 5.4 years ago by 89k • written 5.4 years ago by ▴ 120
2
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1
reply
1.6k
views
What is the difference of "scaffold" and "contig" in assembly ?
Assembly assembly genome
5.4 years ago by takoyaki ▴ 120
1
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1
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8.5k
views
Comment: C: How to draw boxplot with each point and background color by R ?
5.6 years ago by takoyaki ▴ 120
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0
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8.5k
views
Comment: C: How to draw boxplot with each point and background color by R ?
5.6 years ago by takoyaki ▴ 120
18
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13
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8.5k
views
How to draw boxplot with each point and background color by R ?
R RNA-Seq
updated 5.6 years ago by 89k • written 5.6 years ago by ▴ 120
0
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1
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8.5k
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Comment: C: How to draw boxplot with each point and background color by R ?
5.6 years ago by takoyaki ▴ 120
0
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1
reply
8.5k
views
Comment: C: How to draw boxplot with each point and background color by R ?
5.6 years ago by takoyaki ▴ 120
0
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0
replies
8.5k
views
Comment: C: How to draw boxplot with each point and background color by R ?
5.6 years ago by takoyaki ▴ 120
2
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1
reply
8.6k
views
Comment: C: Homer error "findMotifsGenome.pl" : Can't locate HomerConfig.pm in @INC
5.6 years ago by takoyaki ▴ 120
4
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5
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8.6k
views
Homer error "findMotifsGenome.pl" : Can't locate HomerConfig.pm in @INC
ChIP-Seq next-gen sequence software error
updated 5.6 years ago by ★ 30k • written 5.6 years ago by ▴ 120
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0
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2.7k
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Comment: C: What is the difference between picard and picard-tools ?
5.6 years ago by takoyaki ▴ 120
3
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2
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2.7k
views
What is the difference between picard and picard-tools ?
genome PCR sequence next-gen
updated 5.6 years ago by 22k • written 5.6 years ago by ▴ 120
0
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0
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2.8k
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Comment: C: Which Normalization is good in RNA-Seq ? How normalization is calculated ?
6.0 years ago by takoyaki ▴ 120
0
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1
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2.8k
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Comment: C: Which Normalization is good in RNA-Seq ? How normalization is calculated ?
6.0 years ago by takoyaki ▴ 120
4
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6
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2.8k
views
Which Normalization is good in RNA-Seq ? How normalization is calculated ?
rna-seq RNA-Seq R
6.0 years ago by takoyaki ▴ 120
1
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0
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4.5k
views
Comment: C: How to adjust graphics co-scatter plot using R function "pairs.panels" in librar
6.1 years ago by takoyaki ▴ 120
1
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2
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4.5k
views
How to adjust graphics co-scatter plot using R function "pairs.panels" in library "psych" ?
R graph rna-seq
updated 6.1 years ago by 89k • written 6.1 years ago by ▴ 120
0
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0
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5.5k
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Comment: C: Error of featureCounts : /lib64/libc.so.6: version `GLIBC_2.14' not found (requ
6.1 years ago by takoyaki ▴ 120
0
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0
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5.5k
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Comment: C: Error of featureCounts : /lib64/libc.so.6: version `GLIBC_2.14' not found (requ
6.1 years ago by takoyaki ▴ 120
0
votes
9
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5.5k
views
Error of featureCounts : /lib64/libc.so.6: version `GLIBC_2.14' not found (required by featureCounts)
RNA-Seq software error next-gen
updated 6.1 years ago by ▴ 350 • written 6.1 years ago by ▴ 120
1
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0
replies
4.8k
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Comment: C: How to proccess Microarrays CEL file byR package "oligo" ?
6.1 years ago by takoyaki ▴ 120
5
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2
replies
4.8k
views
How to proccess Microarrays CEL file byR package "oligo" ?
R microarray software error
updated 6.1 years ago by 89k • written 6.1 years ago by ▴ 120
0
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0
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10k
views
Comment: C: How to install R packages that need dev program like RCurl, png, XML by conda ?
6.2 years ago by takoyaki ▴ 120
0
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1
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10k
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Comment: C: How to install R packages that need dev program like RCurl, png, XML by conda ?
6.2 years ago by takoyaki ▴ 120
0
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0
replies
10k
views
Comment: C: How to install R packages that need dev program like RCurl, png, XML by conda ?
6.2 years ago by takoyaki ▴ 120
7
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7
replies
10k
views
How to install R packages that need dev program like RCurl, png, XML by conda ?
RNA-Seq R software error package
updated 6.2 years ago by ▴ 10 • written 6.2 years ago by ▴ 120
8
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5
replies
6.0k
views
How to use htseq-count with several samples ?
RNA-Seq next-gen gene
updated 3.9 years ago by ▴ 210 • written 6.2 years ago by ▴ 120
0
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1
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6.0k
views
Comment: C: How to use htseq-count with several samples ?
6.2 years ago by takoyaki ▴ 120
0
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0
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3.6k
views
Comment: C: How to draw gene expression heatmap ?
6.2 years ago by takoyaki ▴ 120
1
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0
replies
3.6k
views
Comment: C: How to draw gene expression heatmap ?
6.2 years ago by takoyaki ▴ 120
3
votes
4
replies
3.6k
views
How to draw gene expression heatmap ?
RNA-Seq gene next-gen R
updated 6.2 years ago by 89k • written 6.2 years ago by ▴ 120
5
votes
1
reply
1.5k
views
Mapping soft for de novo assembly
RNA-Seq Assembly Mapping
updated 6.3 years ago by 20 • written 6.3 years ago by ▴ 120
0
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0
replies
1.7k
views
Comment: C: How to edit signalp program like git hub ?
6.3 years ago by takoyaki ▴ 120
1
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2
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1.7k
views
How to edit signalp program like git hub ?
RNA-Seq software error alignment next-gen gene
updated 6.3 years ago by 8.0k • written 6.3 years ago by ▴ 120
2
votes
2
replies
1.7k
views
Standard value of quality score and sequence length in QC trimming of RNA-Seq
rna-seq next-gen sequencing
updated 6.3 years ago by ▴ 300 • written 6.3 years ago by ▴ 120
0
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0
replies
7.2k
views
Comment: C: clustal omega vs mafft
6.4 years ago by takoyaki ▴ 120
3
votes
2
replies
7.2k
views
clustal omega vs mafft
alignment sequence genome gene
6.4 years ago by takoyaki ▴ 120
52 results • Page 1 of 2
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