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Comment: Comment: Prediction tools summary - zero values
15 months ago by luffy ▴ 130
1
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0
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846
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Comment: Comment: How to choose the best tool for variant trio analysis
15 months ago by luffy ▴ 130
3
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1
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1.4k
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Answer: Answer: Prediction tools summary - zero values
15 months ago by luffy ▴ 130
0
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1
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480
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small RNAseq analysis of non human samples
lncRNA sRNA DEG small-RNA RNA-seq
updated 15 months ago by 44k • written 15 months ago by ▴ 130
1
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0
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1.1k
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Comment: Comment: identify DEGs across all conditions and per specific conditions
15 months ago by luffy ▴ 130
1
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1
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1.1k
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Comment: Comment: Which function is best for pathway analysis?
15 months ago by luffy ▴ 130
1
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0
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725
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Answer: Answer: How to retrieve LoF and missense variants in WES data?
16 months ago by luffy ▴ 130
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0
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782
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Answer: Answer: functional and genome annotation analysis
16 months ago by luffy ▴ 130
0
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0
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1.3k
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Answer: Answer: matching gnomAD allele frequency
17 months ago by luffy ▴ 130
0
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0
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638
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Comment: Comment: Denovo variants
17 months ago by luffy ▴ 130
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1
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2.0k
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Comment: Comment: How to modify labels of complexheatmap
17 months ago by luffy ▴ 130
1
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3
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2.0k
views
How to modify labels of complexheatmap
R gene oncoprint complexheatmap
updated 17 months ago by 44k • written 17 months ago by ▴ 130
5
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1
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1.0k
views
drug sensitivity prediction
deseq2 oncopredict R drug
updated 18 months ago by ★ 4.3k • written 2.2 years ago by ▴ 130
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0
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2.4k
views
Comment: Comment: How to correct unknown Batch effect?
21 months ago by luffy ▴ 130
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1
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2.4k
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Comment: Comment: How to correct unknown Batch effect?
21 months ago by luffy ▴ 130
4
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5
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2.4k
views
How to correct unknown Batch effect?
PCA gene-expression DESeq2 RNA-seq batch-effect
updated 9 months ago by 44k • written 21 months ago by ▴ 130
0
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0
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534
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How to predict drug response or estimate drug sensitivity?
DEGs drugbank IC50 drug R
2.2 years ago by luffy ▴ 130
0
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1
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876
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Comment: Comment: Calculate statistically significance of a small sample size
2.3 years ago by luffy ▴ 130
1
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3
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876
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Calculate statistically significance of a small sample size
pearson R spearman statistics
updated 2.3 years ago by 10k • written 2.3 years ago by ▴ 130
0
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0
replies
1.5k
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Comment: Comment: Variant identified, What next?
2.4 years ago by luffy ▴ 130
0
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0
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1.5k
views
Comment: Comment: Variant identified, What next?
2.4 years ago by luffy ▴ 130
0
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1
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1.5k
views
Comment: Comment: Variant identified, What next?
2.4 years ago by luffy ▴ 130
4
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7
replies
1.5k
views
Variant identified, What next?
classification variant Exom RNAseq
updated 2.4 years ago by ▴ 430 • written 2.4 years ago by ▴ 130
0
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4
replies
1.5k
views
Extract certain fasta sequnce from multi fasta file
python regex bash fasta
updated 2.5 years ago by ★ 5.2k • written 2.5 years ago by ▴ 130
0
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0
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1.2k
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Comment: Comment: Allele frequency for genes
3.3 years ago by luffy ▴ 130
0
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1
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1.2k
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Comment: Comment: Allele frequency for genes
3.3 years ago by luffy ▴ 130
0
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4
replies
1.2k
views
Allele frequency for genes
frequency gnomAD gene allele
3.3 years ago by luffy ▴ 130
1
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1
reply
756
views
Plot a network based on correlation
correlation plot network RNAseq
updated 3.5 years ago by 88k • written 3.5 years ago by ▴ 130
0
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0
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1.3k
views
Comment: Comment: Coordinates long non-coding RNAs
3.7 years ago by luffy ▴ 130
0
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1
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1.3k
views
Comment: Comment: Coordinates long non-coding RNAs
3.7 years ago by luffy ▴ 130
1
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4
replies
1.3k
views
Coordinates long non-coding RNAs
gtf python bedtools rna-seq hg38
3.7 years ago by luffy ▴ 130
0
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1
reply
2.9k
views
Comment: Comment: RNAseq data analysis of pooled data
3.8 years ago by luffy ▴ 130
0
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1
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2.9k
views
Comment: Comment: RNAseq data analysis of pooled data
3.8 years ago by luffy ▴ 130
1
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1
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2.9k
views
Comment: Comment: RNAseq data analysis of pooled data
3.8 years ago by luffy ▴ 130
0
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0
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2.9k
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Comment: Comment: RNAseq data analysis of pooled data
3.8 years ago by luffy ▴ 130
3
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4
replies
3.3k
views
Help with CNV calling using ExomeDepth
exomedepth R CNV gCNV exome
updated 3.8 years ago by ▴ 40 • written 4.1 years ago by ▴ 130
7
votes
12
replies
2.9k
views
RNAseq data analysis of pooled data
DESeq2 mapping featurecounts clustering RNA-Seq
updated 3.7 years ago by ★ 2.6k • written 3.8 years ago by ▴ 130
0
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1
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2.9k
views
Comment: Comment: RNAseq data analysis of pooled data
3.8 years ago by luffy ▴ 130
0
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1
reply
865
views
Comment: C: Query regarding variant calling and reporting
3.9 years ago by luffy ▴ 130
0
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3
replies
865
views
Query regarding variant calling and reporting
clinical exome whole exome compound heterozygous
3.9 years ago by luffy ▴ 130
0
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0
replies
2.1k
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Comment: C: Biological Databases Geographical Distribution
4.1 years ago by luffy ▴ 130
0
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1
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2.1k
views
Comment: C: Biological Databases Geographical Distribution
4.1 years ago by luffy ▴ 130
0
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1
reply
3.3k
views
Comment: C: Help with CNV calling using ExomeDepth
4.1 years ago by luffy ▴ 130
0
votes
0
replies
949
views
Suggestion for workflow to predict pathogenicity of SNV and INDELs
machine learning python pathogenicity SVM workflow
4.3 years ago by luffy ▴ 130
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