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0
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4
replies
2.6k
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Differential methylation analysis
differential-methylation
updated 2.5 years ago by 45k • written 7.6 years ago by ▴ 500
0
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1
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2.6k
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Comment: C: Differential methylation analysis
7.6 years ago by David_emir ▴ 500
0
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0
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3.8k
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Comment: C: Data Discrepency from TCGA-GDC portal and GDC firehose
7.6 years ago by David_emir ▴ 500
0
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1
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3.8k
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Comment: C: Data Discrepency from TCGA-GDC portal and GDC firehose
7.6 years ago by David_emir ▴ 500
0
votes
5
replies
3.8k
views
Data Discrepency from TCGA-GDC portal and GDC firehose
TCGA GDC firehose
updated 7.6 years ago by ▴ 700 • written 7.6 years ago by ▴ 500
0
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1
reply
2.6k
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Differentially methylated regions Analysis
tcgabiolinks DMR packages
updated 7.6 years ago by ▴ 330 • written 7.6 years ago by ▴ 500
0
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1
reply
5.3k
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Comment: C: TCGABioLinks how to set Sample conditions?
7.6 years ago by David_emir ▴ 500
0
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1
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5.3k
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Comment: C: TCGABioLinks how to set Sample conditions?
7.6 years ago by David_emir ▴ 500
3
votes
5
replies
5.3k
views
TCGABioLinks how to set Sample conditions?
TCGABolinks TCGA DMR DGE
updated 7.7 years ago by ▴ 90 • written 7.7 years ago by ▴ 500
0
votes
9
replies
2.7k
views
ELMER Package Error
ELEMER Package RNA-seq DGE DME
updated 7.7 years ago by • 0 • written 7.7 years ago by ▴ 500
0
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0
replies
2.7k
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Comment: C: ELMER Package Error
7.7 years ago by David_emir ▴ 500
0
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1
reply
2.7k
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Comment: C: ELMER Package Error
7.7 years ago by David_emir ▴ 500
0
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1
reply
2.7k
views
Comment: C: ELMER Package Error
7.7 years ago by David_emir ▴ 500
0
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1
reply
2.7k
views
Comment: C: ELMER Package Error
7.7 years ago by David_emir ▴ 500
0
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1
reply
3.3k
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Comment: C: phasing with Eagle
7.9 years ago by David_emir ▴ 500
0
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3
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3.3k
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phasing with Eagle
Imputation without reference
7.9 years ago by David_emir ▴ 500
1
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0
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7.0k
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Comment: C: Custom Reference panel creation for data imputation from .vcf files
7.9 years ago by David_emir ▴ 500
0
votes
1
reply
7.0k
views
Comment: C: Custom Reference panel creation for data imputation from .vcf files
7.9 years ago by David_emir ▴ 500
0
votes
1
reply
7.0k
views
Comment: C: Custom Reference panel creation for data imputation from .vcf files
7.9 years ago by David_emir ▴ 500
9
votes
13
replies
7.0k
views
Custom Reference panel creation for data imputation from .vcf files
imputation reference panel
updated 18 months ago by ▴ 70 • written 7.9 years ago by ▴ 500
5
votes
4
replies
3.5k
views
GitHub-GTEx Pipeline- how to execute ?
GTEx pipeline execution rna-seq genotype
updated 4.5 years ago by 23k • written 7.9 years ago by ▴ 500
0
votes
1
reply
6.7k
views
Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
0
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0
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6.7k
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Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
0
votes
1
reply
6.7k
views
Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
0
votes
1
reply
6.7k
views
Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
0
votes
0
replies
3.1k
views
Comment: C: GDC - count Matrix data
8.0 years ago by David_emir ▴ 500
0
votes
2
replies
3.1k
views
GDC - count Matrix data
GDC Count RNA-Seq
updated 8.0 years ago by ▴ 790 • written 8.0 years ago by ▴ 500
0
votes
0
replies
6.7k
views
Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
0
votes
1
reply
6.7k
views
Comment: C: TCGA - COAD read data gene expression analysis
8.0 years ago by David_emir ▴ 500
8
votes
11
replies
6.7k
views
TCGA - COAD read data gene expression analysis
GDC gene expression RNA-Seq
updated 8.0 years ago by ▴ 790 • written 8.0 years ago by ▴ 500
0
votes
0
replies
4.1k
views
Comment: C: DeconstructSigs - Multiple sample size(~90 samples)
8.1 years ago by David_emir ▴ 500
0
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1
reply
4.1k
views
Comment: C: DeconstructSigs - Multiple sample size(~90 samples)
8.1 years ago by David_emir ▴ 500
3
votes
7
replies
4.1k
views
DeconstructSigs - Multiple sample size(~90 samples)
deconstructsigs maf multiple samples
updated 8.1 years ago by ★ 1.2k • written 8.1 years ago by ▴ 500
0
votes
0
replies
4.1k
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Comment: C: DeconstructSigs - Multiple sample size(~90 samples)
8.1 years ago by David_emir ▴ 500
0
votes
0
replies
2.0k
views
Deconstruct signature package
maf header names
8.2 years ago by David_emir ▴ 500
0
votes
0
replies
1.6k
views
Maf to VCF file convertion, offline_cache not downloading
maf vcf
8.2 years ago by David_emir ▴ 500
0
votes
1
reply
2.9k
views
mutation signatures from MAF's, and decompose them into Stratton signatures
stratton maf Mutation-signature
updated 2.6 years ago by 45k • written 8.3 years ago by ▴ 500
0
votes
0
replies
4.2k
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Comment: C: CollectAlignmentSummaryMetrics from Picard
8.5 years ago by David_emir ▴ 500
0
votes
0
replies
4.2k
views
Comment: C: CollectAlignmentSummaryMetrics from Picard
8.5 years ago by David_emir ▴ 500
2
votes
4
replies
4.2k
views
CollectAlignmentSummaryMetrics from Picard
picard CollectAlignmentSummaryMetrics
updated 8.5 years ago by 166k • written 8.5 years ago by ▴ 500
11
votes
10
replies
13k
views
Can Limma package be used for RNA-Seq Differential gene expression analysis for Quantile normalized log transformed RPKM data
RNA-Seq limma TCGA
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 500
5
votes
5
replies
6.8k
views
Machine Learning - RNAseq
RNA-Seq Machine learning training data
updated 8.6 years ago by ▴ 60 • written 9.7 years ago by ▴ 500
0
votes
1
reply
5.0k
views
Comment: C: How to conduct pathway analysis from VCF file?
8.7 years ago by David_emir ▴ 500
12
votes
7
replies
5.0k
views
How to conduct pathway analysis from VCF file?
vcf Exome seq GATK
updated 8.7 years ago by ▴ 1000 • written 8.7 years ago by ▴ 500
0
votes
0
replies
5.0k
views
Comment: C: How to conduct pathway analysis from VCF file?
8.7 years ago by David_emir ▴ 500
0
votes
0
replies
3.1k
views
Error while annotating With SnpEff
SnpEff GFF file Error
8.8 years ago by David_emir ▴ 500
5
votes
6
replies
3.0k
views
Variant Calling - for multiple samples need advice
Variant Calling pipeline
updated 8.9 years ago by 48k • written 8.9 years ago by ▴ 500
0
votes
0
replies
3.0k
views
Comment: C: Variant Calling - for multiple samples need advice
8.9 years ago by David_emir ▴ 500
0
votes
2
replies
2.5k
views
Not able to UPDATE BWA in Centos
bwa new version
9.1 years ago by David_emir ▴ 500
13
votes
8
replies
6.2k
views
Genomic Matrix data from TCGA need to be analysied for Differential gene expression
genomicMatrix DGE TCGA
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 500
191 results • Page 3 of 4
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