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0
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2
replies
615
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Two spatial transcriptomics datasets from same patient
Transcriptomics spatial
updated 5 months ago by 3.8k • written 20 months ago by ▴ 470
0
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0
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650
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Comment: Comment: Spatial transcriptomics analyses: Comparing gene expression between biological r
20 months ago by David_emir ▴ 470
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0
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1.1k
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Comment: Comment: Extracting genes form Components : NMF analysis
23 months ago by David_emir ▴ 470
0
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1
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1.1k
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Comment: Comment: Extracting genes form Components : NMF analysis
23 months ago by David_emir ▴ 470
0
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4
replies
1.1k
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Extracting genes form Components : NMF analysis
NMF components rcppml scRNA
23 months ago by David_emir ▴ 470
0
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0
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367
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H & E images ANALYSIS protocol
analysis image HnE
2.3 years ago by David_emir ▴ 470
0
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1
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1.3k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
2.6 years ago by David_emir ▴ 470
0
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1
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1.3k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
2.6 years ago by David_emir ▴ 470
2
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5
replies
1.3k
views
Extracting only tumor samples from Single cell RNASeq
tumor cell singel RNA
updated 2.6 years ago by ★ 16k • written 2.6 years ago by ▴ 470
3
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7
replies
12k
views
Seurat Clustering - Cluster Numbers from 1 instead of 0
RNA-Seq seurat Cluster numbering
updated 2.8 years ago by • 0 • written 3.4 years ago by ▴ 470
0
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0
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1.4k
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Comment: C: Gene expression file to Expression matrix
3.1 years ago by David_emir ▴ 470
0
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0
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1.4k
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Comment: C: Gene expression file to Expression matrix
3.1 years ago by David_emir ▴ 470
2
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7
replies
1.4k
views
Gene expression file to Expression matrix
RNA-Seq
updated 3.1 years ago by ▴ 200 • written 3.1 years ago by ▴ 470
0
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1
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1.4k
views
Comment: C: Gene expression file to Expression matrix
3.1 years ago by David_emir ▴ 470
2
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5
replies
2.1k
views
rna seq public databases
RNA-Seq databases
3.1 years ago by David_emir ▴ 470
0
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1
reply
1.2k
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Comment: C: Quantification of cell cluster in Single cell data
3.1 years ago by David_emir ▴ 470
2
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3
replies
1.2k
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Quantification of cell cluster in Single cell data
RNA-Seq single cell seurat Wilcoxon
3.1 years ago by David_emir ▴ 470
0
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0
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974
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Differentials Expressed Genes from each state in Monocle 2
single cell monocle2 DGE State
3.2 years ago by David_emir ▴ 470
1
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1
reply
1.0k
views
CMS subtype identification in Single cell data
single cell cmscaller RNA-Seq
updated 3.2 years ago by ★ 16k • written 3.2 years ago by ▴ 470
0
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1
reply
1.9k
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Comment: C: Statistical test on Single-cell clusters(cell types)
3.3 years ago by David_emir ▴ 470
0
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1
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1.9k
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Comment: C: Statistical test on Single-cell clusters(cell types)
3.3 years ago by David_emir ▴ 470
2
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7
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1.9k
views
Statistical test on Single-cell clusters(cell types)
statistical single cell exact permutation test
updated 20 months ago by 86k • written 3.3 years ago by ▴ 470
0
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0
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21k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
3.3 years ago by David_emir ▴ 470
8
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11
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21k
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Plotting heatmap of Marker genes in each celltypes in Seurat
seurat singlecell heatmap celltypes
updated 3.3 years ago by ★ 16k • written 3.3 years ago by ▴ 470
0
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1
reply
21k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
3.3 years ago by David_emir ▴ 470
0
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1
reply
21k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
3.3 years ago by David_emir ▴ 470
4
votes
3
replies
7.5k
views
Seurat :Violin plot showing relative expression of select differentially expressed genes
RNA-Seq seurat Violin plot
updated 3.3 years ago by ★ 5.2k • written 3.3 years ago by ▴ 470
0
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0
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7.5k
views
Comment: C: Seurat :Violin plot showing relative expression of select differentially express
3.3 years ago by David_emir ▴ 470
0
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0
replies
12k
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Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
3.4 years ago by David_emir ▴ 470
0
votes
1
reply
12k
views
Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
3.4 years ago by David_emir ▴ 470
0
votes
1
reply
12k
views
Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
3.4 years ago by David_emir ▴ 470
1
vote
1
reply
3.9k
views
GSVA analysis between Clusters
GSVA Single cell seurat
updated 3.4 years ago by ▴ 230 • written 3.4 years ago by ▴ 470
4
votes
4
replies
17k
views
Exporting Raw counts into .csv file from seurat object
seurat raw counts csv
updated 22 months ago by • 0 • written 3.6 years ago by ▴ 470
0
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1
reply
19k
views
Comment: C: Subsetting - Raw Counts from Seurat Object
3.6 years ago by David_emir ▴ 470
3
votes
3
replies
19k
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Subsetting - Raw Counts from Seurat Object
seurat raw counts RNA-Seq
3.6 years ago by David_emir ▴ 470
0
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1
reply
2.1k
views
Comment: C: Count Matrix from Single cell RNA
3.7 years ago by David_emir ▴ 470
1
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3
replies
2.1k
views
Count Matrix from Single cell RNA
single cell RNA count matrix analysis
3.7 years ago by David_emir ▴ 470
0
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0
replies
3.8k
views
Comment: C: Can't open file 'features': [Errno 2] No such file or directory
3.8 years ago by David_emir ▴ 470
0
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1
reply
3.8k
views
Comment: C: Can't open file 'features': [Errno 2] No such file or directory
3.8 years ago by David_emir ▴ 470
4
votes
4
replies
3.8k
views
Can't open file 'features': [Errno 2] No such file or directory
2020plus 20/20Plus mafs random forest
updated 3.8 years ago by ▴ 1000 • written 3.8 years ago by ▴ 470
0
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0
replies
1.1k
views
Comment: C: Cancer driver mutations Identification from VCFs
3.8 years ago by David_emir ▴ 470
2
votes
2
replies
1.1k
views
Cancer driver mutations Identification from VCFs
cancer driver mutation vcf mcf
updated 3.8 years ago by ▴ 1000 • written 3.8 years ago by ▴ 470
3
votes
2
replies
4.8k
views
Changing Sample Names in Merged VCF file
VCF Sample
updated 3.8 years ago by 16k • written 3.8 years ago by ▴ 470
5
votes
5
replies
3.0k
views
Error RNA-seq data, TOPHAT
RNA-Seq
updated 21 months ago by 41k • written 9.0 years ago by ▴ 470
5
votes
5
replies
1.2k
views
Single cell Expression Analysis
Single cell RNA seq
updated 3.8 years ago by ★ 16k • written 3.8 years ago by ▴ 470
0
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0
replies
1.2k
views
Comment: C: Single cell Expression Analysis
3.8 years ago by David_emir ▴ 470
0
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4
replies
16k
views
Answer: A: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random F
updated 4.0 years ago by 41k • written 7.7 years ago by ▴ 470
6
votes
3
replies
3.2k
views
Validating Results from NMF Clustering & Consensus clustering
RNA-Seq validation
updated 4.4 years ago by ▴ 20 • written 4.4 years ago by ▴ 470
0
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0
replies
1.8k
views
Comment: C: What is the best pipeline for analyzing Non-invasive prenatal (NIPT) data?
4.6 years ago by David_emir ▴ 470
1
vote
1
reply
4.2k
views
Comment: C: Aligning Multiple paired end files together
4.6 years ago by David_emir ▴ 470
191 results • Page 1 of 4
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