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231
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Two spatial transcriptomics datasets from same patient
Transcriptomics spatial
12 months ago by David_emir ▴ 460
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0
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482
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Comment: Comment: Spatial transcriptomics analyses: Comparing gene expression between biological r
12 months ago by David_emir ▴ 460
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0
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813
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Comment: Comment: Extracting genes form Components : NMF analysis
15 months ago by David_emir ▴ 460
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1
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813
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Comment: Comment: Extracting genes form Components : NMF analysis
15 months ago by David_emir ▴ 460
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4
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813
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Extracting genes form Components : NMF analysis
NMF components rcppml scRNA
15 months ago by David_emir ▴ 460
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0
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289
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H & E images ANALYSIS protocol
analysis image HnE
19 months ago by David_emir ▴ 460
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1
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1.1k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
23 months ago by David_emir ▴ 460
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1
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1.1k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
23 months ago by David_emir ▴ 460
2
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5
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1.1k
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Extracting only tumor samples from Single cell RNASeq
tumor cell singel RNA
updated 23 months ago by ★ 14k • written 24 months ago by ▴ 460
3
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7
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11k
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Seurat Clustering - Cluster Numbers from 1 instead of 0
RNA-Seq seurat Cluster numbering
updated 2.1 years ago by • 0 • written 2.7 years ago by ▴ 460
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0
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1.1k
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Comment: C: Gene expression file to Expression matrix
2.4 years ago by David_emir ▴ 460
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0
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1.1k
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Comment: C: Gene expression file to Expression matrix
2.4 years ago by David_emir ▴ 460
2
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7
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1.1k
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Gene expression file to Expression matrix
RNA-Seq
updated 2.4 years ago by ▴ 200 • written 2.4 years ago by ▴ 460
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1
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1.1k
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Comment: C: Gene expression file to Expression matrix
2.4 years ago by David_emir ▴ 460
2
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5
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2.0k
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rna seq public databases
RNA-Seq databases
2.4 years ago by David_emir ▴ 460
0
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1
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902
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Comment: C: Quantification of cell cluster in Single cell data
2.5 years ago by David_emir ▴ 460
2
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3
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902
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Quantification of cell cluster in Single cell data
RNA-Seq single cell seurat Wilcoxon
2.5 years ago by David_emir ▴ 460
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0
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856
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Differentials Expressed Genes from each state in Monocle 2
single cell monocle2 DGE State
2.5 years ago by David_emir ▴ 460
1
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1
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819
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CMS subtype identification in Single cell data
single cell cmscaller RNA-Seq
updated 2.5 years ago by ★ 14k • written 2.5 years ago by ▴ 460
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1
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1.6k
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Comment: C: Statistical test on Single-cell clusters(cell types)
2.6 years ago by David_emir ▴ 460
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1
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1.6k
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Comment: C: Statistical test on Single-cell clusters(cell types)
2.6 years ago by David_emir ▴ 460
2
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7
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1.6k
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Statistical test on Single-cell clusters(cell types)
statistical single cell exact permutation test
updated 12 months ago by 84k • written 2.6 years ago by ▴ 460
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0
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16k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
2.6 years ago by David_emir ▴ 460
8
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11
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16k
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Plotting heatmap of Marker genes in each celltypes in Seurat
seurat singlecell heatmap celltypes
updated 2.6 years ago by ★ 14k • written 2.6 years ago by ▴ 460
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1
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16k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
2.6 years ago by David_emir ▴ 460
0
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1
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16k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
2.6 years ago by David_emir ▴ 460
4
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3
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6.7k
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Seurat :Violin plot showing relative expression of select differentially expressed genes
RNA-Seq seurat Violin plot
updated 2.7 years ago by ★ 5.2k • written 2.7 years ago by ▴ 460
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0
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6.7k
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Comment: C: Seurat :Violin plot showing relative expression of select differentially express
2.7 years ago by David_emir ▴ 460
0
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0
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11k
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Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
2.7 years ago by David_emir ▴ 460
0
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1
reply
11k
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Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
2.7 years ago by David_emir ▴ 460
0
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1
reply
11k
views
Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
2.7 years ago by David_emir ▴ 460
1
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1
reply
3.3k
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GSVA analysis between Clusters
GSVA Single cell seurat
updated 2.8 years ago by ▴ 220 • written 2.8 years ago by ▴ 460
4
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4
replies
15k
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Exporting Raw counts into .csv file from seurat object
seurat raw counts csv
updated 14 months ago by • 0 • written 2.9 years ago by ▴ 460
0
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1
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15k
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Comment: C: Subsetting - Raw Counts from Seurat Object
2.9 years ago by David_emir ▴ 460
2
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3
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15k
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Subsetting - Raw Counts from Seurat Object
seurat raw counts RNA-Seq
2.9 years ago by David_emir ▴ 460
0
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1
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1.9k
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Comment: C: Count Matrix from Single cell RNA
3.1 years ago by David_emir ▴ 460
1
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3
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1.9k
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Count Matrix from Single cell RNA
single cell RNA count matrix analysis
3.1 years ago by David_emir ▴ 460
0
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0
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3.5k
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Comment: C: Can't open file 'features': [Errno 2] No such file or directory
3.1 years ago by David_emir ▴ 460
0
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1
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3.5k
views
Comment: C: Can't open file 'features': [Errno 2] No such file or directory
3.1 years ago by David_emir ▴ 460
4
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4
replies
3.5k
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Can't open file 'features': [Errno 2] No such file or directory
2020plus 20/20Plus mafs random forest
updated 3.1 years ago by ▴ 1000 • written 3.1 years ago by ▴ 460
0
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0
replies
904
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Comment: C: Cancer driver mutations Identification from VCFs
3.1 years ago by David_emir ▴ 460
2
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2
replies
904
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Cancer driver mutations Identification from VCFs
cancer driver mutation vcf mcf
updated 3.1 years ago by ▴ 1000 • written 3.1 years ago by ▴ 460
3
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2
replies
3.8k
views
Changing Sample Names in Merged VCF file
VCF Sample
updated 3.1 years ago by 16k • written 3.1 years ago by ▴ 460
5
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5
replies
2.9k
views
Error RNA-seq data, TOPHAT
RNA-Seq
updated 13 months ago by 38k • written 8.3 years ago by ▴ 460
5
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5
replies
952
views
Single cell Expression Analysis
Single cell RNA seq
updated 3.2 years ago by ★ 14k • written 3.2 years ago by ▴ 460
0
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0
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952
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Comment: C: Single cell Expression Analysis
3.2 years ago by David_emir ▴ 460
0
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4
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15k
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Answer: A: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random F
updated 3.4 years ago by 38k • written 7.0 years ago by ▴ 460
6
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3
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2.9k
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Validating Results from NMF Clustering & Consensus clustering
RNA-Seq validation
updated 3.7 years ago by ▴ 20 • written 3.8 years ago by ▴ 460
0
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0
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1.6k
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Comment: C: What is the best pipeline for analyzing Non-invasive prenatal (NIPT) data?
3.9 years ago by David_emir ▴ 460
1
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1
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3.6k
views
Comment: C: Aligning Multiple paired end files together
3.9 years ago by David_emir ▴ 460
191 results • Page 1 of 4
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