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1
vote
1
reply
2.4k
views
Minfi probe filtering
minfi
R
p-value
updated 11 months ago by
eebloom
▴ 90 • written 6.9 years ago by
niutster
▴ 110
0
votes
1
reply
1.8k
views
Error in new version of minfi
minfi
software error
reading file
updated 4.4 years ago by
sabin
▴ 50 • written 7.3 years ago by
niutster
▴ 110
0
votes
3
replies
4.4k
views
converting gene symbol to gene ID in bioDBnet
Gene-Symbol
Entrez
updated 15 months ago by
Ram
44k • written 7.0 years ago by
niutster
▴ 110
0
votes
3
replies
1.8k
views
Illumina HM450 epigenetics
rna-seq
genome
updated 5.1 years ago by
Biostar
20 • written 8.5 years ago by
niutster
▴ 110
1
vote
5
replies
4.4k
views
How to import both node and edge files into cytoscape from WGCNA?
WGCNA
Cytoscape
node file
edge file
updated 5.6 years ago by
zhaoliang0302
▴ 50 • written 6.8 years ago by
niutster
▴ 110
2
votes
1
reply
1.4k
views
common genes between DMRs and DEGs
DMRs
DEGs
Genes
updated 6.2 years ago by
Pin.Bioinf
▴ 340 • written 6.7 years ago by
niutster
▴ 110
0
votes
1
reply
2.1k
views
How to merge probes with the same gene symbol in soft file?
microarray
soft file
gene symbol
updated 6.8 years ago by
mbens
▴ 100 • written 6.8 years ago by
niutster
▴ 110
0
votes
0
replies
4.4k
views
Comment:
C: How to import both node and edge files into cytoscape from WGCNA?
6.8 years ago by
niutster
▴ 110
0
votes
1
reply
10k
views
Comment:
C: How filter genes to construct co-expression network?
6.8 years ago by
niutster
▴ 110
0
votes
1
reply
10k
views
Comment:
C: How filter genes to construct co-expression network?
6.8 years ago by
niutster
▴ 110
19
votes
15
replies
10k
views
7 follow
How filter genes to construct co-expression network?
WGCNA
Co-expreesion network
DEG
Filtering
updated 2.9 years ago by
WouterDeCoster
47k • written 6.8 years ago by
niutster
▴ 110
0
votes
0
replies
1.0k
views
Which differential corellation ranges is meaningful?
differential co-expression
corellation
6.8 years ago by
niutster
▴ 110
0
votes
0
replies
1.2k
views
Comment:
C: similarity in methylation of two different persons
6.9 years ago by
niutster
▴ 110
1
vote
2
replies
1.2k
views
similarity in methylation of two different persons
DMRs
methylation
biology
6.9 years ago by
niutster
▴ 110
0
votes
0
replies
1.1k
views
"ChAMP" package quality controls
R
packages
Quality control
ChAMP
6.9 years ago by
niutster
▴ 110
0
votes
1
reply
1.5k
views
probe's p.value in 450 k array
450k
methylation
p.value
updated 6.9 years ago by
andrew.j.skelton73
6.6k • written 6.9 years ago by
niutster
▴ 110
0
votes
1
reply
2.0k
views
Gene id in bioDBnet web site
Gene Symbol
Gene id
bioDBnet
updated 7.0 years ago by
Uma
• 0 • written 7.4 years ago by
niutster
▴ 110
1
vote
3
replies
1.8k
views
literature review by a web server
literature review
genes
disease
updated 7.0 years ago by
Denise CS
★ 5.2k • written 7.0 years ago by
niutster
▴ 110
0
votes
0
replies
1.4k
views
Comment:
C: Validating methylation data
7.1 years ago by
niutster
▴ 110
0
votes
2
replies
1.4k
views
Validating methylation data
Validating
methylation
expression
7.1 years ago by
niutster
▴ 110
1
vote
1
reply
1.5k
views
Different results from Enrichr
Enrichr
GO
Pathway
7.1 years ago by
niutster
▴ 110
1
vote
2
replies
2.4k
views
KEGG Pathway Search Result Erro
software error
updated 7.1 years ago by
shania90.lk
▴ 30 • written 7.5 years ago by
niutster
▴ 110
0
votes
0
replies
1.2k
views
No significant differential methylated regions in control and eutopic samples comparison
differentially methylated regions
FDR
7.1 years ago by
niutster
▴ 110
3
votes
5
replies
1.6k
views
problems in data frame
data frame
scan command
R
updated 7.2 years ago by
Santosh Anand
5.8k • written 7.3 years ago by
niutster
▴ 110
0
votes
1
reply
1.6k
views
Comment:
C: reading txt file
7.2 years ago by
niutster
▴ 110
0
votes
1
reply
1.6k
views
Comment:
C: reading txt file
7.2 years ago by
niutster
▴ 110
3
votes
4
replies
1.6k
views
reading txt file
R
txt file
updated 7.2 years ago by
dariober
14k • written 7.2 years ago by
niutster
▴ 110
0
votes
1
reply
3.1k
views
Comment:
C: Density plot parameters in minfi package
7.3 years ago by
niutster
▴ 110
0
votes
1
reply
3.1k
views
Comment:
C: Density plot parameters in minfi package
7.3 years ago by
niutster
▴ 110
0
votes
1
reply
1.5k
views
Filtering DMRs
genome
updated 7.3 years ago by
Biostar
20 • written 7.4 years ago by
niutster
▴ 110
0
votes
1
reply
3.1k
views
Comment:
C: Density plot parameters in minfi package
7.3 years ago by
niutster
▴ 110
0
votes
11
replies
3.1k
views
Density plot parameters in minfi package
Density plot
minfi
density parameter
updated 7.3 years ago by
theobroma22
★ 1.2k • written 7.3 years ago by
niutster
▴ 110
0
votes
0
replies
2.4k
views
Comment:
C: minfi out of band probes
7.3 years ago by
niutster
▴ 110
0
votes
1
reply
2.1k
views
Comment:
C: Length of differentially methylated regions
7.3 years ago by
niutster
▴ 110
2
votes
6
replies
2.1k
views
Length of differentially methylated regions
DMRs
genome
length
updated 7.3 years ago by
Devon Ryan
104k • written 7.3 years ago by
niutster
▴ 110
0
votes
0
replies
5.7k
views
Comment:
C: minfi pre-processing and normalization
7.3 years ago by
niutster
▴ 110
0
votes
1
reply
5.7k
views
Comment:
C: minfi pre-processing and normalization
7.3 years ago by
niutster
▴ 110
2
votes
5
replies
5.7k
views
minfi pre-processing and normalization
minfi
R
pre-processing
bead-count
normalization
updated 7.3 years ago by
andrew.j.skelton73
6.6k • written 7.3 years ago by
niutster
▴ 110
0
votes
1
reply
2.4k
views
Comment:
C: minfi out of band probes
7.3 years ago by
niutster
▴ 110
0
votes
4
replies
2.4k
views
minfi out of band probes
R
updated 7.3 years ago by
yura.grabovska
▴ 470 • written 8.0 years ago by
niutster
▴ 110
0
votes
1
reply
2.2k
views
Gene ontology clustering
Gene ontology
clustering
7.4 years ago by
niutster
▴ 110
4
votes
6
replies
3.4k
views
Gene set enrichment analysis tools
Gene-set-enrichment-analysis
bioconductor
updated 16 months ago by
Ram
44k • written 7.4 years ago by
niutster
▴ 110
0
votes
1
reply
3.3k
views
Comment:
C: Converting gene ids to each other
7.4 years ago by
niutster
▴ 110
0
votes
3
replies
1.1k
views
GREAT web server
GREAT web server
coding regins
non-coding regins
7.4 years ago by
niutster
▴ 110
13
votes
8
replies
3.3k
views
6 follow
Converting gene ids to each other
web-server
gene-id
updated 15 months ago by
Ram
44k • written 7.4 years ago by
niutster
▴ 110
0
votes
1
reply
1.3k
views
Comment:
C: Identifying gene parts based on genomic regions
7.4 years ago by
niutster
▴ 110
1
vote
3
replies
1.3k
views
Identifying gene parts based on genomic regions
gene-part
genome
genomic-location
updated 16 months ago by
Ram
44k • written 7.4 years ago by
niutster
▴ 110
0
votes
0
replies
2.0k
views
Converting regions based on gene start , body , end site ,... to promoter ,exon, intron
gene sites
promoter
enhancer
exon
7.4 years ago by
niutster
▴ 110
0
votes
2
replies
1.4k
views
Comment:
C: Subscription between genomic regions
7.4 years ago by
niutster
▴ 110
1
vote
4
replies
1.4k
views
Subscription between genomic regions
genome
subscription
updated 16 months ago by
Ram
44k • written 7.4 years ago by
niutster
▴ 110
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