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Answer: No Cluster ID's present when making UMAP for Joint RNA and ATAC analysis: Signac
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bgbs
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Thanks for your response. I was able to fix this by first making the UMAP for the snRNAseq assay. I re-ran FindNeighbors and then re-ran Fi…
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Here am I, found your post 9 years later, and I'm with the same question... did you find it out?
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> let me know if you see anything strange?
the depth DP at all your sites is only '1'
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Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the cod…
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@juke34 I have another question. Is there a way to extract the longest gene sequence without the introns? For example:
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I did not do anything to the files. I corrected this problem by using -F with fastq dump. When I took a look at line 4 of the input files t…
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Sure, but why? What's the end goal of producing this genome? Is it simply having the genome published or is there some other set of downstr…
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Your object has no clusters set as `Idents`.
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This is awesome. Thank you and it worked like a charm!
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Thank you, I didn't know about the green check mark. I did it now, thanks!
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Please do not use `bioinformatics` as a tag unless your post is about the field of bioinformatics itself. For proper examples, please see F…
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@dunois What I have is an assembled genome of a monocot plant. The assembly was performed using clc genomics. Prior to assembly, I had esti…
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