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27 results • Page
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News:
8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop
RNA-Seq
DNA-Seq
Illumina
22 days ago by
David Langenberger
11k
8
votes
2
replies
793
views
News:
FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell
sequencing
26 days ago by
David Langenberger
11k
3
votes
0
replies
130
views
News:
Interested in Spatial Omics?
Bioconductor
Spatial-Omics
Spatial-Transcriptomics
updated 8 days ago by
Ram
43k • written 8 days ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
197
views
News:
Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy
Generative-AI
scRNA
Machine-Learning
updated 5 days ago by
Ram
43k • written 6 days ago by
Claire Watson
▴ 60
2
votes
0
replies
124
views
News:
Online course: Genome Annotation
Genome-Assembly
RNA-seq
Genome-Annotation
updated 22 days ago by
Ram
43k • written 22 days ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
119
views
News:
Course Functional Programming with R
Rstats
TScourses
Rproject
KeepLearning
Rlang
21 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
131
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News:
Online Course Introduction to Network Analysis and Modelling
Python
Network-Analysis
updated 20 days ago by
Ram
43k • written 20 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
131
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News:
Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM
Rlang
Rstats
Rproject
updated 20 days ago by
Ram
43k • written 20 days ago by
Transmitting Science communication
▴ 70
1
vote
0
replies
135
views
News:
Online Live Course: Introduction to Machine Learning in R
Rstats
TScourses
Rlang
Rproject
updated 20 days ago by
Ram
43k • written 20 days ago by
Transmitting Science communication
▴ 70
1
vote
0
replies
181
views
News:
Landscape Genomics course in Switzerland
LFMM
Landscape-Genomics
Sambada
R
Local-Adaptation
updated 23 days ago by
Ram
43k • written 26 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
185
views
News:
Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop
RNA-seq
nextflow
DNA-seq
updated 15 days ago by
Ram
43k • written 15 days ago by
David Langenberger
11k
0
votes
0
replies
138
views
News:
upcoming online statistical courses
Statistics
R
Data-Analysis
updated 10 days ago by
Ram
43k • written 11 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
149
views
News:
Deadline Approaching: PETs for Public Health Challenge
privacy
public-health-challenge
updated 16 days ago by
Ram
43k • written 16 days ago by
polarise
▴ 380
0
votes
0
replies
107
views
News:
Online course: Genome Annotation
Genome-Assembly
Genome-Annotation
3 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
192
views
News:
Online course: Meta-analysis in R
Meta-Analysis
R
updated 20 days ago by
Ram
43k • written 20 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
150
views
News:
Online course: Food Traceability Using Genomic Tools
Nanopore
Genomic-Tools
Illumina
Food-Traceability
updated 28 days ago by
Ram
43k • written 28 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
122
views
News:
hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models
GLM
R
updated 7 days ago by
Ram
43k • written 8 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
138
views
News:
Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy
Python
NumPy
updated 1 day ago by
Ram
43k • written 1 day ago by
Chakri
• 0
0
votes
0
replies
125
views
News:
Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics
vegan
R
updated 23 days ago by
Ram
43k • written 24 days ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
264
views
News:
FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq
variant-calling
RNA-seq
illumina
transcriptomics
2 days ago by
David Langenberger
11k
0
votes
0
replies
1
view
News:
Beyond beginner R: Advancing your coding skills - September 16-19
AdvancedCoding
Programming
R
just now by
carlopecoraro2
★ 2.5k
0
votes
0
replies
92
views
News:
Online course: DNA methylation
Pacbio
Nanopore
DnaMethylation
Evolution
9 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
164
views
News:
Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis
Statistics
R
updated 6 days ago by
Ram
43k • written 6 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
111
views
News:
Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis
Statistics
R
updated 1 day ago by
Ram
43k • written 1 day ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
201
views
News:
Online course: Meta-analysis in R
Meta-Analysis
Statistics
R
updated 13 days ago by
Ram
43k • written 13 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
186
views
News:
Online course: Network Analysis in R
NetworkAnalyis
R
17 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
184
views
News:
Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo
Individual-Based-Models
Agent-Based-Models
updated 13 days ago by
Ram
43k • written 13 days ago by
carlopecoraro2
★ 2.5k
27 results • Page
1 of 1
Recent Votes
Define enhancer regions
A: how can i download human ribosomal reference ?
Answer: Bacterial plasmid analysis
Answer: Bacterial plasmid analysis
Discrepancy in read counts from fastq
R: Unable to use analyzeFeatures because argument is not a vector
Comment: Odd alignment question/finding
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Apex92
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carlopecoraro2
★ 2.5k
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Jeol
▴ 20
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nicole.kavanagh
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Recent Replies
Answer: Subsetting and merging back Seurat Object brings different results
by
Bine
▴ 60
Noone has an idea? Thank you!
Answer: Bacterial plasmid analysis
by
shenwei356
8.5k
My colleague has an unpublished tool for plasmid analysis (clustering), and it has really good results. You might have a try. https://githu…
Comment: Odd alignment question/finding
by
ATpoint
82k
bwa mem is not fully deterministic, see from the developer: https://www.biostars.org/p/238628/#238817
Comment: How to perform single cell multimodal integration using Seurat for Geo datasets
by
ATpoint
82k
It's funny that you ask because the paper that these data were used for is called `Integrated analysis of multimodal single-cell data` from…
Comment: Odd alignment question/finding
by
liorglic
★ 1.4k
I can't come up with an explanation, but two things you can try for debugging are: 1) look at the fastp stats - do they add up and make sen…
Answer: Bacterial plasmid analysis
by
Mensur Dlakic
★ 27k
If you put all your sequences in separate files but in the same directory, this program will build a cladogram based on average nucleotide …
Comment: POSSUM not working due to incompatible pssm file
by
rianna.collins
• 0
Thank you so much. I'm new to this and didn't realise there was a code option.
Answer: Is there a way to increase the automatic label text size in Cytoscape?
by
Scooter
▴ 280
Greetings, Are you saying that you can't use the size setting in the style tab? That should certainly work, as should the label size se…
Answer: Basic stats in hierfstat
by
mdav
• 0
Hi Zoe, did you find an answer for this? I am also getting the same error.
Comment: GATK won't produce figures while analyzing covariates to generate 'recal_plots.p
by
GenoMax
142k
Your cluster may be missing libraries etc to create the PDF plots (this looks like a cluster job submission) on your cluster. Did you check…
Comment: Post-imputation plot
by
kl
▴ 10
Ok yes I think my thought was that given these errors, I could remove the mismatches and flip the alleles which seem to need flipping based…
Comment: Bacterial plasmid analysis
by
nicole.kavanagh
• 0
I think I will perhaps use their predominant PlasmidFinder type to group plasmids together and create separate core phylogenies for each as…
Comment: Bacterial plasmid analysis
by
GenoMax
142k
Can you classify the plasmids based on function (resistance genes they are carrying or some other criteria). Sizes above are indicating a w…
Comment: DESeq2 processing problems
by
ATpoint
82k
Initially posted here https://support.bioconductor.org/p/9158036/ where I suggested to put code and data and noted that GEOquery returns ar…
Answer: Post-imputation plot
by
LChart
3.9k
I agree that some need to be flipped (A/T and C/G where your panel frequency is 1 - ref panel frequency). There are other variants which yo…
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