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0
votes
0
replies
270
views
Comment: Comment: Source of soft clipped reads from target sequencing
5 weeks ago by yliueagle ▴ 270
1
vote
3
replies
270
views
Source of soft clipped reads from target sequencing
clip reads soft
5 weeks ago by yliueagle ▴ 270
3
votes
1
reply
151
views
Meaning of read color on IGV
IGV
updated 5 weeks ago by 146k • written 5 weeks ago by ▴ 270
0
votes
0
replies
808
views
Comment: Comment: What does the black lines mean in the IGV track
7 months ago by yliueagle ▴ 270
7
votes
5
replies
808
views
What does the black lines mean in the IGV track
IGV
7 months ago by yliueagle ▴ 270
0
votes
0
replies
808
views
Comment: Comment: What does the black lines mean in the IGV track
7 months ago by yliueagle ▴ 270
0
votes
0
replies
633
views
Comment: Comment: Per base sequence content failed in fastQC
8 months ago by yliueagle ▴ 270
0
votes
1
reply
633
views
Comment: Comment: Per base sequence content failed in fastQC
8 months ago by yliueagle ▴ 270
0
votes
4
replies
633
views
Per base sequence content failed in fastQC
fastQC
updated 8 months ago by 117k • written 8 months ago by ▴ 270
0
votes
1
reply
299
views
Retrieve reads overlapping indels
variants reads indel
updated 11 months ago by 9.3k • written 11 months ago by ▴ 270
1
vote
2
replies
1.0k
views
visualize phased vcf file
vcf phasing
updated 15 months ago by ▴ 340 • written 15 months ago by ▴ 270
0
votes
0
replies
617
views
see base quality from IGV
igv reads
updated 20 months ago by 62k • written 20 months ago by ▴ 270
0
votes
3
replies
493
views
many read aligned to the same position but with different variants
alignment duplicates reads
updated 20 months ago by 117k • written 20 months ago by ▴ 270
0
votes
1
reply
493
views
Comment: C: many read aligned to the same position but with different variants
20 months ago by yliueagle ▴ 270
0
votes
1
reply
417
views
bowtie2 inpipe1 inpipe2
bowtie2
updated 22 months ago by 36k • written 22 months ago by ▴ 270
0
votes
0
replies
735
views
Answer: A: Extract base information from aligned reads in a sam file
22 months ago by yliueagle ▴ 270
1
vote
7
replies
735
views
Extract base information from aligned reads in a sam file
sam basepair reads
22 months ago by yliueagle ▴ 270
0
votes
0
replies
735
views
Comment: C: Extract base information from aligned reads in a sam file
22 months ago by yliueagle ▴ 270
0
votes
1
reply
735
views
Comment: C: Extract base information from aligned reads in a sam file
22 months ago by yliueagle ▴ 270
0
votes
1
reply
585
views
Can not change track height of IGV
IGV
2.3 years ago by yliueagle ▴ 270
3
votes
4
replies
3.2k
views
Intron and exon coordinates of all genes from Hg19
gene intron exon cordinates
updated 2.6 years ago by ★ 3.3k • written 2.6 years ago by ▴ 270
1
vote
2
replies
1.2k
views
gene coordinates from TxDb.Hsapiens.UCSC.hg19.knownGene do not match NCBI gene bank
gene
updated 2.8 years ago by 117k • written 2.8 years ago by ▴ 270
0
votes
0
replies
4.1k
views
Comment: C: how to find SNP positions (for non-bioinformaticians)
3.0 years ago by yliueagle ▴ 270
0
votes
1
reply
4.1k
views
Comment: C: how to find SNP positions (for non-bioinformaticians)
3.0 years ago by yliueagle ▴ 270
0
votes
1
reply
879
views
Comment: C: What's the difference between "hg19" and "hg19 v19"
3.3 years ago by yliueagle ▴ 270
2
votes
5
replies
879
views
What's the difference between "hg19" and "hg19 v19"
Assembly RNA-Seq
3.3 years ago by yliueagle ▴ 270
0
votes
1
reply
1.4k
views
Comment: C: Hicexplorer error using hicBuildMatrix: no such file as qc_template.html
3.5 years ago by yliueagle ▴ 270
0
votes
0
replies
1.4k
views
Comment: C: Hicexplorer error using hicBuildMatrix: no such file as qc_template.html
3.5 years ago by yliueagle ▴ 270
0
votes
2
replies
496
views
Gene expression: which allele is considered?
gene expression
updated 3.7 years ago by 102k • written 3.7 years ago by ▴ 270
4
votes
2
replies
2.8k
views
Why low MAF leads to low power
SNP MAF POWER
updated 6.9 years ago by ★ 4.4k • written 6.9 years ago by ▴ 270
1
vote
0
replies
3.1k
views
STRING combined score: a bug or else
STRING protein interaction
7.0 years ago by yliueagle ▴ 270
2
votes
1
reply
1.1k
views
position range of loci
Assembly genome
updated 7.2 years ago by 102k • written 7.2 years ago by ▴ 270
0
votes
0
replies
1.3k
views
functional annotation of protein network
protein gene interaction network annotation
7.2 years ago by yliueagle ▴ 270
2
votes
1
reply
10k
views
DAVID: functional annotation chart result explanation
DAVID
updated 6 days ago by 36k • written 7.2 years ago by ▴ 270
0
votes
0
replies
1.7k
views
Cytoscape: display each node with two nested circles
cytoscape
7.3 years ago by yliueagle ▴ 270
0
votes
1
reply
3.6k
views
Comment: C: GWAS: low explained heritability
7.4 years ago by yliueagle ▴ 270
8
votes
4
replies
3.6k
views
GWAS: low explained heritability
GWAS
updated 8 weeks ago by ★ 2.1k • written 7.5 years ago by ▴ 270
0
votes
3
replies
4.2k
views
GWAS dataset: SNPs with association p-value
GWAS dataset
updated 3 months ago by 36k • written 7.5 years ago by ▴ 270
38
votes
6
replies
4.5k
views
6 follow
Why do genes have so many synonyms?
synonym gene
updated 5 months ago by 36k • written 7.7 years ago by ▴ 270
8
votes
4
replies
3.4k
views
How to group genes as 'gene sets'
gene group
updated 15 months ago by 36k • written 7.7 years ago by ▴ 270
8
votes
3
replies
4.9k
views
Different gene coding the same protein?
gene protein
updated 15 months ago by 36k • written 7.7 years ago by ▴ 270
7
votes
2
replies
2.5k
views
protein interaction database
protein database interaction
updated 5 months ago by 36k • written 7.7 years ago by ▴ 270
14
votes
8
replies
2.6k
views
gene (or SNP) related to a disease
GWAS snp disease
updated 6 months ago by 36k • written 7.8 years ago by ▴ 270
0
votes
0
replies
2.6k
views
Comment: C: gene (or SNP) related to a disease
7.8 years ago by yliueagle ▴ 270
0
votes
0
replies
2.6k
views
Comment: C: gene (or SNP) related to a disease
7.8 years ago by yliueagle ▴ 270
0
votes
0
replies
2.6k
views
Comment: C: gene (or SNP) related to a disease
7.8 years ago by yliueagle ▴ 270
0
votes
3
replies
10k
views
Comment: Comment: Map gene name to gene ID
updated 7 months ago by 36k • written 8.0 years ago by ▴ 270
8
votes
8
replies
10k
views
Map gene name to gene ID
gene
updated 5 months ago by 36k • written 8.0 years ago by ▴ 270
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