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0
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1.7k
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Comment: Comment: Source of soft clipped reads from target sequencing
3.3 years ago by yliueagle ▴ 290
1
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3
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1.7k
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Source of soft clipped reads from target sequencing
clip reads soft
3.3 years ago by yliueagle ▴ 290
3
votes
1
reply
1.5k
views
Meaning of read color on IGV
IGV
updated 3.3 years ago by 166k • written 3.3 years ago by ▴ 290
0
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0
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4.9k
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Comment: Comment: What does the black lines mean in the IGV track
3.8 years ago by yliueagle ▴ 290
7
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5
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4.9k
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What does the black lines mean in the IGV track
IGV
3.8 years ago by yliueagle ▴ 290
0
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0
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4.9k
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Comment: Comment: What does the black lines mean in the IGV track
3.8 years ago by yliueagle ▴ 290
0
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0
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5.0k
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Comment: Comment: Per base sequence content failed in fastQC
3.9 years ago by yliueagle ▴ 290
0
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1
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5.0k
views
Comment: Comment: Per base sequence content failed in fastQC
3.9 years ago by yliueagle ▴ 290
2
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4
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5.0k
views
Per base sequence content failed in fastQC
fastQC
updated 3.9 years ago by 153k • written 3.9 years ago by ▴ 290
0
votes
1
reply
905
views
Retrieve reads overlapping indels
variants reads indel
updated 4.2 years ago by 9.8k • written 4.2 years ago by ▴ 290
1
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2
replies
2.9k
views
visualize phased vcf file
vcf phasing
updated 4.5 years ago by ▴ 600 • written 4.5 years ago by ▴ 290
0
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0
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1.4k
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see base quality from IGV
igv reads
updated 4.9 years ago by 89k • written 4.9 years ago by ▴ 290
0
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3
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1.1k
views
many read aligned to the same position but with different variants
alignment duplicates reads
updated 4.9 years ago by 153k • written 4.9 years ago by ▴ 290
0
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1
reply
1.1k
views
Comment: C: many read aligned to the same position but with different variants
4.9 years ago by yliueagle ▴ 290
0
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1
reply
865
views
bowtie2 inpipe1 inpipe2
bowtie2
updated 5.1 years ago by 45k • written 5.1 years ago by ▴ 290
3
votes
7
replies
2.2k
views
Extract base information from aligned reads in a sam file
sam basepair reads
5.1 years ago by yliueagle ▴ 290
2
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0
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2.2k
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Answer: A: Extract base information from aligned reads in a sam file
5.1 years ago by yliueagle ▴ 290
0
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0
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2.2k
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Comment: C: Extract base information from aligned reads in a sam file
5.1 years ago by yliueagle ▴ 290
0
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1
reply
2.2k
views
Comment: C: Extract base information from aligned reads in a sam file
5.1 years ago by yliueagle ▴ 290
0
votes
1
reply
1.6k
views
Can not change track height of IGV
IGV
5.5 years ago by yliueagle ▴ 290
6
votes
4
replies
6.9k
views
Intron and exon coordinates of all genes from Hg19
gene intron exon cordinates
updated 5.8 years ago by ★ 3.9k • written 5.8 years ago by ▴ 290
1
vote
2
replies
2.3k
views
gene coordinates from TxDb.Hsapiens.UCSC.hg19.knownGene do not match NCBI gene bank
gene
updated 6.0 years ago by 153k • written 6.0 years ago by ▴ 290
0
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0
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9.0k
views
Comment: C: how to find SNP positions (for non-bioinformaticians)
6.2 years ago by yliueagle ▴ 290
0
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1
reply
9.0k
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Comment: C: how to find SNP positions (for non-bioinformaticians)
6.2 years ago by yliueagle ▴ 290
0
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1
reply
2.0k
views
Comment: C: What's the difference between "hg19" and "hg19 v19"
6.5 years ago by yliueagle ▴ 290
2
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5
replies
2.0k
views
What's the difference between "hg19" and "hg19 v19"
Assembly RNA-Seq
6.5 years ago by yliueagle ▴ 290
0
votes
1
reply
2.4k
views
Comment: C: Hicexplorer error using hicBuildMatrix: no such file as qc_template.html
6.8 years ago by yliueagle ▴ 290
0
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0
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2.4k
views
Comment: C: Hicexplorer error using hicBuildMatrix: no such file as qc_template.html
6.8 years ago by yliueagle ▴ 290
0
votes
2
replies
914
views
Gene expression: which allele is considered?
gene expression
updated 6.9 years ago by 105k • written 6.9 years ago by ▴ 290
4
votes
2
replies
3.8k
views
Why low MAF leads to low power
MAF POWER SNP
updated 2.9 years ago by 45k • written 10.1 years ago by ▴ 290
1
vote
0
replies
4.1k
views
STRING combined score: a bug or else
protein-interaction STRING
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 290
2
votes
1
reply
1.6k
views
position range of loci
Assembly genome
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 290
0
votes
0
replies
1.6k
views
functional annotation of protein network
protein gene interaction network annotation
10.4 years ago by yliueagle ▴ 290
2
votes
1
reply
11k
views
DAVID: functional annotation chart result explanation
DAVID
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 290
0
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0
replies
2.2k
views
Cytoscape: display each node with two nested circles
cytoscape
10.5 years ago by yliueagle ▴ 290
0
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1
reply
4.5k
views
Comment: C: GWAS: low explained heritability
10.7 years ago by yliueagle ▴ 290
8
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4
replies
4.5k
views
GWAS: low explained heritability
GWAS
updated 3.4 years ago by 4.8k • written 10.7 years ago by ▴ 290
0
votes
3
replies
5.1k
views
GWAS dataset: SNPs with association p-value
GWAS dataset
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 290
38
votes
6
replies
7.1k
views
6 follow
Why do genes have so many synonyms?
synonym gene
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 290
8
votes
4
replies
4.6k
views
How to group genes as 'gene sets'
gene group
updated 4.5 years ago by 45k • written 10.9 years ago by ▴ 290
8
votes
3
replies
6.3k
views
Different gene coding the same protein?
gene protein
updated 4.5 years ago by 45k • written 10.9 years ago by ▴ 290
7
votes
2
replies
3.3k
views
protein interaction database
protein database interaction
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 290
14
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8
replies
4.0k
views
gene (or SNP) related to a disease
GWAS snp disease
updated 3.7 years ago by 45k • written 11.1 years ago by ▴ 290
0
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0
replies
4.0k
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Comment: C: gene (or SNP) related to a disease
11.1 years ago by yliueagle ▴ 290
0
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0
replies
4.0k
views
Comment: C: gene (or SNP) related to a disease
11.1 years ago by yliueagle ▴ 290
0
votes
0
replies
4.0k
views
Comment: C: gene (or SNP) related to a disease
11.1 years ago by yliueagle ▴ 290
0
votes
3
replies
12k
views
Comment: Comment: Map gene name to gene ID
updated 3.8 years ago by 45k • written 11.2 years ago by ▴ 290
8
votes
8
replies
12k
views
Map gene name to gene ID
gene
updated 3.7 years ago by 45k • written 11.2 years ago by ▴ 290
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