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9
votes
7
replies
3.5k
views
How to Identify the pathogenicity of a set of variants (by using ACMG guidelines)?
pathogenicity SNP variants
updated 6 months ago by ▴ 60 • written 7.0 years ago by ▴ 210
10
votes
20
replies
5.5k
views
Plot number of mutations in each cancer type in VCF files?
vcf SNP plot
updated 3.0 years ago by ▴ 300 • written 7.4 years ago by ▴ 210
11
votes
7
replies
16k
views
How to include/keep only the samples in a list in VCF.gz file?
vcf samples bcftools
updated 3.0 years ago by 166k • written 7.4 years ago by ▴ 210
1
vote
2
replies
1.8k
views
Error wiht MUMMER mapview
Mummer mapview genome
updated 4.8 years ago by • 0 • written 6.8 years ago by ▴ 210
4
votes
7
replies
2.7k
views
SNP position in UTRs
SNP
updated 5.2 years ago by 20 • written 8.2 years ago by ▴ 210
8
votes
7
replies
17k
views
6 follow
AB1 to FASTQ
FASTQ AB1 CONVERSION
updated 5.9 years ago by ▴ 20 • written 7.6 years ago by ▴ 210
0
votes
0
replies
1.4k
views
Comment: C: How to find mutations uniqueness in different resources/databases?
6.0 years ago by DanielC ▴ 210
0
votes
2
replies
1.4k
views
How to find mutations uniqueness in different resources/databases?
mutation databases clinical
updated 6.0 years ago by ★ 5.2k • written 6.1 years ago by ▴ 210
0
votes
0
replies
2.5k
views
Comment: C: Is reproducibility of identified variants in a gene important in Sanger sequenci
6.1 years ago by DanielC ▴ 210
0
votes
2
replies
2.5k
views
Comment: C: Is reproducibility of identified variants in a gene important in Sanger sequenci
6.1 years ago by DanielC ▴ 210
0
votes
1
reply
2.5k
views
Comment: C: Is reproducibility of identified variants in a gene important in Sanger sequenci
6.1 years ago by DanielC ▴ 210
0
votes
2
replies
2.5k
views
Comment: C: Is reproducibility of identified variants in a gene important in Sanger sequenci
6.1 years ago by DanielC ▴ 210
13
votes
13
replies
2.5k
views
Is reproducibility of identified variants in a gene important in Sanger sequencing?
reproducibility sanger sequencing variants
6.1 years ago by DanielC ▴ 210
2
votes
9
replies
2.1k
views
how many genomes from BLAST hit should be considered for phylogeny tree analysis?
phylogeny tree taxonomy genome
updated 6.1 years ago by 20 • written 6.1 years ago by ▴ 210
0
votes
1
reply
2.0k
views
Comment: C: Crystal structure of lambda phage?
6.1 years ago by DanielC ▴ 210
0
votes
2
replies
2.0k
views
Comment: C: Crystal structure of lambda phage?
6.1 years ago by DanielC ▴ 210
0
votes
1
reply
2.1k
views
Comment: C: how many genomes from BLAST hit should be considered for phylogeny tree analysis
6.1 years ago by DanielC ▴ 210
0
votes
1
reply
2.1k
views
Comment: C: how many genomes from BLAST hit should be considered for phylogeny tree analysis
6.1 years ago by DanielC ▴ 210
0
votes
1
reply
2.0k
views
Comment: C: Crystal structure of lambda phage?
6.1 years ago by DanielC ▴ 210
1
vote
8
replies
2.0k
views
Crystal structure of lambda phage?
phage lambda E-Coli
6.2 years ago by DanielC ▴ 210
0
votes
1
reply
1.2k
views
Comment: C: How to performs genome assembly of multiple phages in one Fastq single-end file?
6.2 years ago by DanielC ▴ 210
0
votes
3
replies
1.2k
views
How to performs genome assembly of multiple phages in one Fastq single-end file?
Assembly genome fastq
6.2 years ago by DanielC ▴ 210
0
votes
0
replies
4.1k
views
Comment: C: Calculate Ribosome Binding Score for ORFs?
6.2 years ago by DanielC ▴ 210
0
votes
0
replies
4.1k
views
Comment: C: Calculate Ribosome Binding Score for ORFs?
6.2 years ago by DanielC ▴ 210
0
votes
1
reply
1.4k
views
Can DMPfold and I-Tasser work well for de novo structure prediction of 1135 amino acid long sequence?
protein-structure de novo prediction
updated 6.2 years ago by ▴ 390 • written 6.2 years ago by ▴ 210
0
votes
1
reply
4.1k
views
Comment: C: Calculate Ribosome Binding Score for ORFs?
6.2 years ago by DanielC ▴ 210
4
votes
9
replies
4.1k
views
Calculate Ribosome Binding Score for ORFs?
ORF RBS
updated 6.2 years ago by ▴ 130 • written 6.5 years ago by ▴ 210
0
votes
0
replies
3.1k
views
Comment: C: Error with Formatdb of legacy blast?
6.2 years ago by DanielC ▴ 210
0
votes
1
reply
3.1k
views
Comment: C: Error with Formatdb of legacy blast?
6.2 years ago by DanielC ▴ 210
2
votes
4
replies
3.1k
views
Error with Formatdb of legacy blast?
formatdb database
updated 6.2 years ago by ★ 30k • written 6.2 years ago by ▴ 210
0
votes
0
replies
4.1k
views
Comment: C: Calculate Ribosome Binding Score for ORFs?
6.2 years ago by DanielC ▴ 210
0
votes
1
reply
4.1k
views
Comment: C: Calculate Ribosome Binding Score for ORFs?
6.2 years ago by DanielC ▴ 210
0
votes
0
replies
1.1k
views
How to identify bacteria and outer membrane proteins of bacteria that correspond to an assembled phage?
phage bacteria beta-barrel outer membrane proteins
6.2 years ago by DanielC ▴ 210
0
votes
0
replies
17k
views
Comment: C: Where to download MinKnow software of MinION from?
6.3 years ago by DanielC ▴ 210
0
votes
1
reply
17k
views
Comment: C: Where to download MinKnow software of MinION from?
6.3 years ago by DanielC ▴ 210
1
vote
4
replies
17k
views
Where to download MinKnow software of MinION from?
Sequencing software MinIon
updated 6.3 years ago by 48k • written 6.3 years ago by ▴ 210
0
votes
0
replies
1.6k
views
Ensembl and Aceview - difference in the UTR sequence
sequence genome
updated 6.4 years ago by 20 • written 8.2 years ago by ▴ 210
2
votes
1
reply
1.7k
views
Draw annotations on the predicted CDS/genes using a software/tool
draw annotation genes Assembly
updated 6.4 years ago by 20 • written 6.6 years ago by ▴ 210
0
votes
0
replies
1.0k
views
Predict the ligand binding site in an Outer Membrane Protein (OMP)?
docking simulation phage tail proteins OMP
6.5 years ago by DanielC ▴ 210
0
votes
1
reply
1.6k
views
Comment: C: Does Mauve tool work?
6.5 years ago by DanielC ▴ 210
0
votes
4
replies
1.6k
views
Does Mauve tool work?
Mauve Gene
6.5 years ago by DanielC ▴ 210
0
votes
0
replies
1.0k
views
Program to align big DNA sequences (100000 bases) and look at conserved regions among them?
DNA sequence alignment conserved region
6.6 years ago by DanielC ▴ 210
0
votes
1
reply
2.8k
views
Comment: C: Get protein domain information from nucleotide sequence of assembled contigs?
6.6 years ago by DanielC ▴ 210
0
votes
1
reply
2.8k
views
Comment: C: Get protein domain information from nucleotide sequence of assembled contigs?
6.6 years ago by DanielC ▴ 210
0
votes
2
replies
2.8k
views
Comment: C: Get protein domain information from nucleotide sequence of assembled contigs?
6.6 years ago by DanielC ▴ 210
0
votes
1
reply
2.8k
views
Comment: C: Get protein domain information from nucleotide sequence of assembled contigs?
6.6 years ago by DanielC ▴ 210
0
votes
1
reply
2.8k
views
Comment: C: Get protein domain information from nucleotide sequence of assembled contigs?
6.6 years ago by DanielC ▴ 210
1
vote
11
replies
2.8k
views
Get protein domain information from nucleotide sequence of assembled contigs?
contig domain proteins interprp hmmpred
updated 6.6 years ago by 16k • written 6.6 years ago by ▴ 210
0
votes
0
replies
1.5k
views
View MAF file and the reference sequence in a genome viewer/annotator along with SAM/BAM?
SAM BAM MAF viewer
6.6 years ago by DanielC ▴ 210
0
votes
0
replies
5.2k
views
Comment: C: Manually curate gene annotation by visualizing on IGV or tablet or any better vi
6.6 years ago by DanielC ▴ 210
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