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find mouse homologs to human long non coding rnas
human lncnra homologs mouse
updated 28 days ago by ▴ 230 • written 5 weeks ago by ▴ 350
0
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1
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2.8k
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Comment: C: impute2 output files to vcf
3.2 years ago by tarek.mohamed ▴ 350
1
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0
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2.8k
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Comment: C: impute2 output files to vcf
3.2 years ago by tarek.mohamed ▴ 350
0
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1
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2.8k
views
Comment: C: impute2 output files to vcf
3.2 years ago by tarek.mohamed ▴ 350
0
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1
reply
2.8k
views
Comment: C: impute2 output files to vcf
3.2 years ago by tarek.mohamed ▴ 350
4
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9
replies
2.8k
views
impute2 output files to vcf
impute2 output vcf file
updated 3.2 years ago by 37k • written 3.2 years ago by ▴ 350
2
votes
5
replies
1.6k
views
Minion reads error rate for indels and snps
minion error rate
updated 3.6 years ago by 20 • written 3.7 years ago by ▴ 350
0
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1
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1.6k
views
Comment: C: Minion reads error rate for indels and snps
3.7 years ago by tarek.mohamed ▴ 350
0
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1
reply
3.8k
views
using tximport to prepare salmon quantification files for DEG analysis
RNA-Seq tximport
updated 3.8 years ago by 20 • written 4.8 years ago by ▴ 350
0
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1
reply
2.2k
views
Rsubread versus BWA ( Burrows-Wheeler Alignmener) for whole genome alignment
Rsubread BWA NGS
updated 3.8 years ago by ★ 5.4k • written 6.4 years ago by ▴ 350
2
votes
2
replies
2.5k
views
lgen to ped using plink
plink lgen mismatch
updated 4.0 years ago by 11k • written 5.4 years ago by ▴ 350
3
votes
3
replies
5.2k
views
Nanopore SNP and indels calling tool
nanopore snps indels calling tools
updated 4.2 years ago by 47k • written 4.6 years ago by ▴ 350
4
votes
1
reply
2.3k
views
structural variant vcf file comparison
vcf SV
updated 4.2 years ago by 47k • written 4.2 years ago by ▴ 350
0
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0
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872
views
Comment: C: Using one bam file with huge coverage, How to generate several bam files with di
4.4 years ago by tarek.mohamed ▴ 350
1
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2
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872
views
Using one bam file with huge coverage, How to generate several bam files with different coverage
bam filter SNPs caller
updated 4.4 years ago by 47k • written 4.4 years ago by ▴ 350
0
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1
reply
8.2k
views
Comment: C: bcftools mpileup output format
4.4 years ago by tarek.mohamed ▴ 350
3
votes
3
replies
8.2k
views
bcftools mpileup output format
bcftools mpileup
4.4 years ago by tarek.mohamed ▴ 350
0
votes
3
replies
1.6k
views
Percent identity plot
precent identitiy alignment plot
updated 4.5 years ago by 34k • written 4.5 years ago by ▴ 350
0
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0
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2.3k
views
Comment: C: Long DNA reads aligned
4.6 years ago by tarek.mohamed ▴ 350
0
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1
reply
2.3k
views
Comment: C: Long DNA reads aligned
4.6 years ago by tarek.mohamed ▴ 350
4
votes
6
replies
2.3k
views
Long DNA reads aligned
nanopore
updated 4.6 years ago by 47k • written 4.6 years ago by ▴ 350
0
votes
4
replies
4.6k
views
How to extract raw genotype calls from idat or gtc illumina files
gtc files idat files raw genotype calls
updated 4.6 years ago by ▴ 160 • written 5.5 years ago by ▴ 350
0
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0
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970
views
Comment: C: amino acid alteration position for SNPs using biomart
4.6 years ago by tarek.mohamed ▴ 350
3
votes
2
replies
970
views
amino acid alteration position for SNPs using biomart
biomart snps locations aminoacids
updated 4.6 years ago by 8.3k • written 4.6 years ago by ▴ 350
0
votes
9
replies
2.0k
views
How to increase the speed of subread for DNA whole genome sequence
subread speed DNA sequence
updated 4.7 years ago by ▴ 20 • written 6.4 years ago by ▴ 350
0
votes
1
reply
1.5k
views
Plotting linkage equilibrium results
linkage disequilibrium plink plotting LD heatmap
updated 5.1 years ago by ▴ 970 • written 5.1 years ago by ▴ 350
0
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0
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6.2k
views
Comment: C: linkage disequilibrium analysis
5.1 years ago by tarek.mohamed ▴ 350
0
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1
reply
6.2k
views
Comment: C: linkage disequilibrium analysis
5.2 years ago by tarek.mohamed ▴ 350
5
votes
8
replies
6.2k
views
linkage disequilibrium analysis
LD SNPs different chromosomes
updated 18 months ago by 84k • written 5.2 years ago by ▴ 350
0
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0
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1.0k
views
Answer: A: SNPs and Gene Expression
5.3 years ago by tarek.mohamed ▴ 350
0
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0
replies
1.7k
views
Comment: C: counting the reads that mapped to a part of transcriptome
5.3 years ago by tarek.mohamed ▴ 350
0
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1
reply
1.7k
views
Answer: A: counting the reads that mapped to a part of transcriptome
5.3 years ago by tarek.mohamed ▴ 350
3
votes
0
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23k
views
Comment: C: How is the design in DESeq2 work?
5.3 years ago by tarek.mohamed ▴ 350
6
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2
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23k
views
Comment: C: How is the design in DESeq2 work?
5.3 years ago by tarek.mohamed ▴ 350
0
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1
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1.5k
views
Answer: A: How to start analyzing next-generation DNA and RNA sequencing data?
5.3 years ago by tarek.mohamed ▴ 350
1
vote
3
replies
2.9k
views
compare genotypes in two vcf files
compare genotypes vcf files
updated 5.3 years ago by 20 • written 5.4 years ago by ▴ 350
0
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0
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3.0k
views
Comment: C: PLINK2 recode ped flag issue
5.3 years ago by tarek.mohamed ▴ 350
0
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1
reply
3.0k
views
Answer: A: PLINK2 recode ped flag issue
5.3 years ago by tarek.mohamed ▴ 350
0
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0
replies
2.3k
views
Answer: A: Using GAGE to Analyze Pathway Enrichment Directly from Fold Change Data
5.3 years ago by tarek.mohamed ▴ 350
1
vote
1
reply
1.4k
views
Answer: A: Converting numeric to alphanumeric allele codes
5.3 years ago by tarek.mohamed ▴ 350
0
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0
replies
944
views
Answer: A: Counting read ends in RNA-Seq
5.3 years ago by tarek.mohamed ▴ 350
0
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0
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1.9k
views
Comment: C: NGS alignment image drawing
5.4 years ago by tarek.mohamed ▴ 350
8
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1
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6.7k
views
Answer: C: efetch error LWP::Protocol::https not installed
5.4 years ago by tarek.mohamed ▴ 350
0
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1
reply
2.7k
views
Comment: C: Download snps within 1Mb from gene
5.4 years ago by tarek.mohamed ▴ 350
0
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0
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1.7k
views
Answer: A: List of accession numbers for nucleotide sequences to protein sequences using R
5.4 years ago by tarek.mohamed ▴ 350
0
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0
replies
1.2k
views
Comment: C: Finding specific subsets of genes related with known transcription factors
5.4 years ago by tarek.mohamed ▴ 350
0
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1
reply
15k
views
Comment: C: Downloading gtf file for RefSeq
5.4 years ago by tarek.mohamed ▴ 350
0
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1
reply
15k
views
Comment: A: Downloading gtf file for RefSeq
5.4 years ago by tarek.mohamed ▴ 350
0
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1
reply
1.1k
views
Comment: C: Converting raw counts or DEseq2 output to TxDb container
5.4 years ago by tarek.mohamed ▴ 350
1
vote
1
reply
1.1k
views
Answer: A: Converting raw counts or DEseq2 output to TxDb container
5.4 years ago by tarek.mohamed ▴ 350
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