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5
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5
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How to download intronic positions from Ensembl
genome ensembl
updated 3 months ago by • 0 • written 9.8 years ago by ▴ 50
0
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1
reply
1.8k
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Comment: C: Bam output of deduplication using UMItools
5.8 years ago by Ati ▴ 50
0
votes
3
replies
1.8k
views
Bam output of deduplication using UMItools
flagstat samtools RNA-seq UMItools bam dedup
updated 2.7 years ago by 45k • written 5.8 years ago by ▴ 50
0
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0
replies
1.7k
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Comment: C: High number of reads with the incorrect strand designation.
5.8 years ago by Ati ▴ 50
0
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0
replies
1.5k
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Comment: C: memory problem runnig multiqc --interactive
5.8 years ago by Ati ▴ 50
0
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2
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1.5k
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memory problem runnig multiqc --interactive
RNA-Seq multiqc
updated 5.8 years ago by 154k • written 5.8 years ago by ▴ 50
0
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1
reply
1.7k
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Comment: C: High number of reads with the incorrect strand designation.
5.8 years ago by Ati ▴ 50
0
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0
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1.7k
views
Comment: C: High number of reads with the incorrect strand designation.
5.8 years ago by Ati ▴ 50
4
votes
7
replies
1.7k
views
High number of reads with the incorrect strand designation.
picard CollectRnaSeqMetrics RNA-Seq rna-seq Picard
5.8 years ago by Ati ▴ 50
0
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0
replies
3.4k
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Comment: C: Deduplication using UMItools
5.8 years ago by Ati ▴ 50
0
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1
reply
3.4k
views
Comment: C: Deduplication using UMItools
5.8 years ago by Ati ▴ 50
2
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4
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3.4k
views
Deduplication using UMItools
RNA-Seq bam umitools duplication Picard
updated 5.8 years ago by 105k • written 5.8 years ago by ▴ 50
0
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1
reply
2.2k
views
Answer: A: Create txt file in a for loop
updated 5.9 years ago by 45k • written 5.9 years ago by ▴ 50
1
vote
15
replies
2.2k
views
Create txt file in a for loop
bash loop linux
updated 5.9 years ago by ▴ 140 • written 5.9 years ago by ▴ 50
0
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0
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2.2k
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Comment: C: Create txt file in a for loop
5.9 years ago by Ati ▴ 50
2
votes
1
reply
1.6k
views
UMI on the fastq header
UMI RNA-Seq umi-tools fastq illumina
5.9 years ago by Ati ▴ 50
0
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1
reply
3.2k
views
Comment: C: How to calculate the shortest path between each pairs of genes in WGCNA
6.8 years ago by Ati ▴ 50
0
votes
3
replies
3.2k
views
How to calculate the shortest path between each pairs of genes in WGCNA
wgcna R gene co-expression analysis
updated 6.8 years ago by 8.4k • written 6.8 years ago by ▴ 50
3
votes
10
replies
4.9k
views
How to annotate positions using biomaRt R package?
r biomart
updated 2.6 years ago by 45k • written 9.7 years ago by ▴ 50
0
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0
replies
4.9k
views
Comment: C: How to annotate positions using biomaRt R package?
updated 7.1 years ago by 45k • written 9.7 years ago by ▴ 50
0
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0
replies
2.3k
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Answer: A: How should I define contrast with more than 2 levels in DESeq2 ?
9.0 years ago by Ati ▴ 50
0
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1
reply
3.1k
views
Comment: C: Why DESeq2 filter and remove genes with high count?
9.1 years ago by Ati ▴ 50
0
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0
replies
15k
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Comment: C: Best Way To Quantify Influence Of Different Covariates On Gene Expression?
9.2 years ago by Ati ▴ 50
0
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0
replies
2.8k
views
Comment: C: Motifs data base
9.5 years ago by Ati ▴ 50
0
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0
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2.8k
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Comment: C: Motifs data base
9.5 years ago by Ati ▴ 50
3
votes
4
replies
2.8k
views
Motifs data base
RNA-Seq Motifs DNA DREME
updated 9.5 years ago by ▴ 140 • written 9.5 years ago by ▴ 50
0
votes
0
replies
2.6k
views
Comment: C: Co-variants in differential expression analysis
9.5 years ago by Ati ▴ 50
2
votes
6
replies
2.6k
views
Co-variants in differential expression analysis
RNA-Seq sequencing DE edgeR Voom
9.5 years ago by Ati ▴ 50
0
votes
2
replies
2.6k
views
Comment: C: Co-variants in differential expression analysis
9.5 years ago by Ati ▴ 50
0
votes
1
reply
3.1k
views
Comment: C: bigwig file in UCSC custom track
9.5 years ago by Ati ▴ 50
1
vote
3
replies
3.1k
views
bigwig file in UCSC custom track
UCSC bigwig RNA-Seq sequencing
updated 9.6 years ago by 11k • written 9.6 years ago by ▴ 50
0
votes
3
replies
2.1k
views
How to interprate edgeR result for different comparison
RNA-Seq edgeR R next-gen
updated 9.6 years ago by 5.8k • written 9.6 years ago by ▴ 50
0
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0
replies
2.1k
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Comment: C: How to interprate edgeR result for different comparison
9.6 years ago by Ati ▴ 50
0
votes
0
replies
3.0k
views
Comment: C: Pathway analysis using R
9.7 years ago by Ati ▴ 50
0
votes
0
replies
2.5k
views
Comment: C: How to get sequence using masked repeats?
9.7 years ago by Ati ▴ 50
2
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4
replies
2.5k
views
How to get sequence using masked repeats?
UCSC sequence
9.7 years ago by Ati ▴ 50
0
votes
0
replies
2.5k
views
Comment: C: How to get sequence using masked repeats?
9.7 years ago by Ati ▴ 50
1
vote
2
replies
3.0k
views
Pathway analysis using R
RNA-Seq R
updated 9.7 years ago by ★ 5.2k • written 9.7 years ago by ▴ 50
1
vote
2
replies
3.6k
views
Convert ensembl gene ID
RNA-Seq Ensembl
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 50
0
votes
1
reply
4.9k
views
Comment: C: How to annotate positions using biomaRt R package?
9.7 years ago by Ati ▴ 50
0
votes
0
replies
4.9k
views
Comment: C: How to annotate positions using biomaRt R package?
9.7 years ago by Ati ▴ 50
0
votes
1
reply
4.9k
views
Comment: C: How to annotate positions using biomaRt R package?
9.7 years ago by Ati ▴ 50
0
votes
0
replies
4.9k
views
Comment: C: How to annotate positions using biomaRt R package?
9.7 years ago by Ati ▴ 50
0
votes
0
replies
25k
views
Comment: Comment: Bed to BedGraph
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 50
0
votes
1
reply
25k
views
Comment: Comment: Bed to BedGraph
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 50
0
votes
1
reply
25k
views
Comment: C: Bed to BedGraph
9.8 years ago by Ati ▴ 50
9
votes
7
replies
25k
views
Bed to BedGraph
RNA-Seq DaPars bedgraph bed
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 50
2
votes
1
reply
12k
views
how to download gene annotation bed file from ensembl?
ensembl RNA-Seq genome ucsc
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 50
0
votes
0
replies
5.4k
views
Comment: C: How to download intronic positions from Ensembl
9.8 years ago by Ati ▴ 50
49 results • Page 1 of 1
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