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Comment: C: Find mismatch in two columns in a data frame in R
5.9 years ago by k.kathirvel93 ▴ 310
0
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1
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2.7k
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Comment: C: RNA-seq normalization and standardization
6.0 years ago by k.kathirvel93 ▴ 310
0
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0
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1.4k
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Comment: C: RPKM values for mapped miRNA reads
6.0 years ago by k.kathirvel93 ▴ 310
1
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2
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1.4k
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Comment: C: RPKM values for mapped miRNA reads
6.0 years ago by k.kathirvel93 ▴ 310
0
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1
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6.0k
views
Comment: C: RNA-seq quantification Stringtie, featurecounts and HTSeq - am I correct?
6.0 years ago by k.kathirvel93 ▴ 310
4
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4
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6.0k
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RNA-seq quantification Stringtie, featurecounts and HTSeq - am I correct?
RNA-Seq rna-seq gene next-gen genome
6.0 years ago by k.kathirvel93 ▴ 310
0
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0
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5.5k
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Comment: C: Dealing with gff files in STAR
6.0 years ago by k.kathirvel93 ▴ 310
0
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1
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2.0k
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Comment: C: How to run eXpress RNA-seq quantification?
6.0 years ago by k.kathirvel93 ▴ 310
2
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6
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2.0k
views
How to run eXpress RNA-seq quantification?
RNA-Seq rna-seq gene next-gen
6.0 years ago by k.kathirvel93 ▴ 310
0
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1
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2.0k
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Comment: C: How to run eXpress RNA-seq quantification?
6.0 years ago by k.kathirvel93 ▴ 310
0
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2
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8.5k
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Comment: C: RNA seq normalization(TMM)
6.0 years ago by k.kathirvel93 ▴ 310
2
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1
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3.2k
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Comment: C: How can i get gene name instead of gene ID from prepDE.py after STRINGtie?
6.0 years ago by k.kathirvel93 ▴ 310
7
votes
15
replies
4.1k
views
6 follow
Sort Sequences In A Fasta File According To The peg List
RNA-Seq sequence next-gen
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 310
0
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1
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1.9k
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Comment: C: HISAT2 alignment Error?
6.1 years ago by k.kathirvel93 ▴ 310
0
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1
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1.9k
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Comment: C: HISAT2 alignment Error?
6.1 years ago by k.kathirvel93 ▴ 310
1
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5
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1.9k
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HISAT2 alignment Error?
RNA-Seq software error rna-seq Assembly next-gen
6.1 years ago by k.kathirvel93 ▴ 310
0
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1
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4.1k
views
Comment: A: Sort Sequences In A Fasta File According To The peg List
updated 6.1 years ago by 44k • written 8.6 years ago by ▴ 310
0
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1
reply
4.1k
views
Comment: C: Sort Sequences In A Fasta File According To The peg List
updated 6.1 years ago by 44k • written 8.6 years ago by ▴ 310
0
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1
reply
4.1k
views
Comment: A: Sort Sequences In A Fasta File According To The peg List
updated 6.1 years ago by 44k • written 8.6 years ago by ▴ 310
0
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0
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4.5k
views
Comment: A: STAR set --sjdbOverhang value
6.1 years ago by k.kathirvel93 ▴ 310
1
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1
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1.2k
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Answer: A: About aligment in RNASeq analysis
6.1 years ago by k.kathirvel93 ▴ 310
2
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2
replies
2.2k
views
How could i use Quantile (or) TMM normalized counts as input for DESEQ2?
RNA-Seq R next-gen rna-seq
updated 6.1 years ago by 47k • written 6.1 years ago by ▴ 310
0
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1
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1.9k
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Comment: C: Can I upload several Genbank files to RAST?
6.1 years ago by k.kathirvel93 ▴ 310
1
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1
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2.5k
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Comment: C: Aligning Contigs of various Mtb strains to a reference genome and get the varian
6.1 years ago by k.kathirvel93 ▴ 310
2
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1
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2.5k
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Answer: A: Aligning Contigs of various Mtb strains to a reference genome and get the varian
6.1 years ago by k.kathirvel93 ▴ 310
0
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0
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2.0k
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Answer: A: which gap filler do you recommend?
6.1 years ago by k.kathirvel93 ▴ 310
0
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1
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2.2k
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Comment: C: RNA-seq : Quantification problem after mapped with BBMap
6.2 years ago by k.kathirvel93 ▴ 310
3
votes
5
replies
3.2k
views
How can i get gene name instead of gene ID from prepDE.py after STRINGtie?
RNA-Seq next-gen gene
3.3 years ago by k.kathirvel93 ▴ 310
16
votes
9
replies
4.0k
views
6 follow
How can I perform Differential expression analysis with just one control and one cancer sample?
R RNA-Seq gene
6.2 years ago by k.kathirvel93 ▴ 310
1
vote
5
replies
1.7k
views
RNA-seq illumina paired-end data simulation with fold change differences
sequence simulation rna-seq
updated 6.2 years ago by ★ 2.6k • written 6.3 years ago by ▴ 310
2
votes
5
replies
2.2k
views
RNA-seq : Quantification problem after mapped with BBMap
RNA-Seq next-gen software error
updated 6.2 years ago by ★ 3.8k • written 6.2 years ago by ▴ 310
16
votes
9
replies
12k
views
7 follow
How to convert transcript level TPM to gene level TPM ?
RNA-Seq next-gen gene rna-seq sequencing
updated 6.2 years ago by ▴ 520 • written 6.2 years ago by ▴ 310
0
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1
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2.1k
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Comment: C: Sort and convert the SAM files to BAM
updated 6.2 years ago by 16k • written 6.2 years ago by ▴ 310
0
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1
reply
1.4k
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Comment: C: Need suggestions for RNA-seq quantification tools benchmarking.
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
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2.4k
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Comment: C: RNA-seq mapping Reference genome
6.2 years ago by k.kathirvel93 ▴ 310
3
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7
replies
2.4k
views
RNA-seq mapping Reference genome
RNA-Seq next-gen rna-seq
updated 6.2 years ago by 104k • written 6.2 years ago by ▴ 310
0
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1
reply
2.4k
views
Comment: C: RNA-seq mapping Reference genome
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
reply
16k
views
Comment: C: rsem calculate expression using STAR. Reference genome format?
updated 6.2 years ago by 35k • written 6.2 years ago by ▴ 310
0
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3
replies
1.4k
views
Need suggestions for RNA-seq quantification tools benchmarking.
RNA-Seq rna-seq next-gen
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
reply
16k
views
Comment: C: rsem calculate expression using STAR. Reference genome format?
6.2 years ago by k.kathirvel93 ▴ 310
0
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0
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5.1k
views
Comment: A: Trim Paired-end Fastq Files
6.2 years ago by k.kathirvel93 ▴ 310
0
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0
replies
720
views
Fromwhere I can get MAQC RNA-seq datasets ?
RNA-Seq sequence rna-seq next-gen
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
reply
1.5k
views
Comment: C: Why Cufflinks is not Running?
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
reply
1.5k
views
Comment: C: Why Cufflinks is not Running?
6.2 years ago by k.kathirvel93 ▴ 310
0
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1
reply
1.5k
views
Comment: C: Why Cufflinks is not Running?
6.2 years ago by k.kathirvel93 ▴ 310
1
vote
8
replies
1.5k
views
Why Cufflinks is not Running?
RNA-Seq next-gen software error
updated 6.2 years ago by 9.8k • written 6.2 years ago by ▴ 310
0
votes
0
replies
22k
views
Comment: C: What Ngs Read Simulators Are Available For Paired-End Data?
6.3 years ago by k.kathirvel93 ▴ 310
0
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3
replies
1.5k
views
Polyester RNA-seq simulation
RNA-Seq sequencing next-gen
updated 6.3 years ago by 146k • written 6.3 years ago by ▴ 310
0
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0
replies
1.5k
views
Comment: C: Polyester RNA-seq simulation
6.3 years ago by k.kathirvel93 ▴ 310
0
votes
2
replies
7.2k
views
Comment: C: fastq- dump error
6.3 years ago by k.kathirvel93 ▴ 310
167 results • Page 2 of 4
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