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Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.2 years ago by Picasa ▴ 690
0
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1
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.2 years ago by Picasa ▴ 690
0
votes
1
reply
10k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.2 years ago by Picasa ▴ 690
2
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7
replies
4.0k
views
Using RNA seq for genome annotation
maker annotation
updated 4.3 years ago by 103k • written 8.3 years ago by ▴ 690
0
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0
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801
views
Phased SNPs with single rad seq data ?
snp rad single
4.4 years ago by Picasa ▴ 690
0
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0
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955
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Alternative free software for recombination rate estimation ?
radseq joinmap stacks
4.4 years ago by Picasa ▴ 690
0
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0
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1.3k
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Tools for .hic file visualization
juicer 3d-dna hic
4.5 years ago by Picasa ▴ 690
0
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1
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5.3k
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Comment: C: Using HiCanu assembler on PacBio Hifi reads
4.8 years ago by Picasa ▴ 690
0
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1
reply
1.1k
views
Assessing collapsed assembly ?
Assembly paralogue collapsing
updated 5.2 years ago by 7.9k • written 5.2 years ago by ▴ 690
0
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1
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13k
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Comment: C: Create de novo repeat library
5.2 years ago by Picasa ▴ 690
0
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1
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13k
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Comment: C: Create de novo repeat library
5.3 years ago by Picasa ▴ 690
0
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1
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14k
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Comment: C: RAxML outputs: which one I have to take ?
5.3 years ago by Picasa ▴ 690
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1
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3.7k
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Comment: C: ONT fast5 basecalling
5.3 years ago by Picasa ▴ 690
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0
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2.1k
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Comment: C: Best way for phylogenetic tree with missing data
5.3 years ago by Picasa ▴ 690
0
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0
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26k
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Comment: C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
5.3 years ago by Picasa ▴ 690
0
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1
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2.1k
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Comment: C: Best way for phylogenetic tree with missing data
5.3 years ago by Picasa ▴ 690
2
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5
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2.1k
views
Best way for phylogenetic tree with missing data
phylogenetic tree
updated 5.3 years ago by ★ 30k • written 5.3 years ago by ▴ 690
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1
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2.1k
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Comment: C: Transcript or cds for phylogenetic tree ?
5.3 years ago by Picasa ▴ 690
3
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3
replies
2.1k
views
Transcript or cds for phylogenetic tree ?
msa phylogenetic
updated 5.3 years ago by 15k • written 5.3 years ago by ▴ 690
1
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0
replies
789
views
Subset long reads and optimal coverage
long reads Assembly
updated 5.3 years ago by 20 • written 5.4 years ago by ▴ 690
0
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1
reply
3.2k
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Comment: C: Workflow for structural variants from long read sequencing data
5.4 years ago by Picasa ▴ 690
0
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0
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1.6k
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Comment: C: Structural variation germline vs somatic ?
5.5 years ago by Picasa ▴ 690
0
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0
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1.6k
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Comment: C: Structural variation germline vs somatic ?
5.5 years ago by Picasa ▴ 690
3
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4
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1.6k
views
Structural variation germline vs somatic ?
structural variation germline somatic
updated 5.5 years ago by ▴ 10 • written 5.5 years ago by ▴ 690
0
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1
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1.8k
views
Comment: C: How to get Gene ID from NCBI accession for non model species ?
5.5 years ago by Picasa ▴ 690
2
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3
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1.8k
views
How to get Gene ID from NCBI accession for non model species ?
gene id ncbi accession
updated 5.5 years ago by 153k • written 5.5 years ago by ▴ 690
0
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1
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1.9k
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Comment: C: RepeatMasker overlap and interpretation
5.5 years ago by Picasa ▴ 690
6
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6
replies
2.3k
views
Where to upload protein coding gene annotation ?
maker protein
updated 5.5 years ago by 9.3k • written 5.5 years ago by ▴ 690
0
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3
replies
1.9k
views
RepeatMasker overlap and interpretation
repeat overlap
updated 5.5 years ago by 15k • written 5.5 years ago by ▴ 690
1
vote
3
replies
1.3k
views
Contig longer than mitochondrial sequence. Explanation ?
mitochondrial contig
updated 5.6 years ago by ▴ 290 • written 5.6 years ago by ▴ 690
0
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1
reply
1.1k
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hi-c coverage for scaffolding
hi c scaffold Assembly
5.6 years ago by Picasa ▴ 690
0
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1
reply
10k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
5.7 years ago by Picasa ▴ 690
0
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1
reply
1.1k
views
SnpEff database with maker annotation format
maker snpeff
updated 5.8 years ago by ▴ 70 • written 5.8 years ago by ▴ 690
1
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0
replies
1.9k
views
Comment: C: Extract genes from GTF with variants from VCF
5.8 years ago by Picasa ▴ 690
0
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1
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1.9k
views
Comment: C: Extract genes from GTF with variants from VCF
5.8 years ago by Picasa ▴ 690
1
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4
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1.9k
views
Extract genes from GTF with variants from VCF
gtf variants
5.8 years ago by Picasa ▴ 690
0
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1
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1.7k
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Comment: C: Get counts for allele specific expression analysis
5.9 years ago by Picasa ▴ 690
1
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4
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1.7k
views
Get counts for allele specific expression analysis
RNA-Seq allele expression ase-tigar
5.9 years ago by Picasa ▴ 690
0
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0
replies
25k
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Comment: C: Recommendations For Heterozygous Genome Assembly Software
updated 5.9 years ago by 45k • written 9.2 years ago by ▴ 690
0
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0
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3.3k
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Comment: C: Scaffolding a genome with long reads.
5.9 years ago by Picasa ▴ 690
6
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7
replies
3.3k
views
Scaffolding a genome with long reads.
assembly long reads pacbio
updated 5.9 years ago by 15k • written 5.9 years ago by ▴ 690
2
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1
reply
2.8k
views
Option -categorize in SNAP gene prediction.
annotation snap maker
updated 5.9 years ago by 20 • written 8.9 years ago by ▴ 690
0
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1
reply
7.4k
views
Comment: A: How to interpret and extract from a Vcf file Genotype informations as values
updated 6.0 years ago by 45k • written 9.5 years ago by ▴ 690
0
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1
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3.6k
views
Comment: C: Good coverage value for de novo assembly with NanoPore Reads?
6.0 years ago by Picasa ▴ 690
0
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0
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2.3k
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Comment: C: Location of centromere
6.2 years ago by Picasa ▴ 690
0
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0
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2.3k
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Comment: C: Location of centromere
6.2 years ago by Picasa ▴ 690
0
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1
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2.3k
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Comment: C: Location of centromere
6.2 years ago by Picasa ▴ 690
1
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10
replies
2.3k
views
Location of centromere
genome centromere
6.2 years ago by Picasa ▴ 690
0
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1
reply
2.3k
views
Comment: C: Location of centromere
6.2 years ago by Picasa ▴ 690
0
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0
replies
5.4k
views
Comment: C: mummerplot for genome self alignment NOT yielding full length diagonal graph
6.2 years ago by Picasa ▴ 690
358 results • Page 2 of 8
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