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Comment: C: Bowtie For Rna Seq Data
12.6 years ago by Varun Gupta ★ 1.3k
0
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1
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8.8k
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Comment: C: Which Program Should I Test To Map Rnaseq Data? Did Anybody Tried Gsnap?
12.6 years ago by Varun Gupta ★ 1.3k
1
vote
4
replies
4.1k
views
Differences In The Read Mapping Percentages When Using Bowtie And Gsnap
bowtie mapping
updated 12.7 years ago by 103k • written 12.7 years ago by ★ 1.3k
0
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1
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36k
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Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
12.7 years ago by Varun Gupta ★ 1.3k
0
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0
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36k
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Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
12.7 years ago by Varun Gupta ★ 1.3k
0
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0
replies
36k
views
Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
12.7 years ago by Varun Gupta ★ 1.3k
0
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0
replies
4.1k
views
Comment: C: Differences In The Read Mapping Percentages When Using Bowtie And Gsnap
12.7 years ago by Varun Gupta ★ 1.3k
0
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1
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3.1k
views
Comment: C: Bowtie1 Gapped Alignment
12.7 years ago by Varun Gupta ★ 1.3k
6
votes
2
replies
11k
views
Tophat Junctions.Bed File
tophat
updated 2.5 years ago by 45k • written 13.4 years ago by ★ 1.3k
0
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1
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3.1k
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Comment: C: Bowtie1 Gapped Alignment
12.7 years ago by Varun Gupta ★ 1.3k
0
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5
replies
3.1k
views
Bowtie1 Gapped Alignment
bowtie
updated 12.7 years ago by 27k • written 12.7 years ago by ★ 1.3k
1
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6
replies
5.5k
views
Java Treeview With Kmeans
java
12.7 years ago by Varun Gupta ★ 1.3k
0
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1
reply
5.5k
views
Comment: C: Java Treeview With Kmeans
12.7 years ago by Varun Gupta ★ 1.3k
2
votes
2
replies
7.7k
views
Ab Solid Fastq To Illumina Fastq
solid
updated 12.8 years ago by 13k • written 12.8 years ago by ★ 1.3k
2
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5
replies
4.0k
views
How To Get Junctions File Using Gsnap
gsnap RNA-seq
updated 2.5 years ago by 45k • written 13.3 years ago by ★ 1.3k
0
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0
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11k
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Comment: C: Going From Cigar String In Sam To Genomic Coordinates?
12.8 years ago by Varun Gupta ★ 1.3k
1
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1
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3.0k
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Obtaining Junctions.Bed File From Aligners Such As Gsnap
updated 12.8 years ago by ★ 1.5k • written 12.8 years ago by ★ 1.3k
0
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0
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4.0k
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Comment: C: How To Get Junctions File Using Gsnap
12.8 years ago by Varun Gupta ★ 1.3k
0
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0
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5.8k
views
Comment: C: Why Is The Tophat2 Unmapped.Bam File Larger Than The Accepted.Bam File?
12.9 years ago by Varun Gupta ★ 1.3k
0
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1
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5.8k
views
Comment: Comment: Why Is The Tophat2 Unmapped.Bam File Larger Than The Accepted.Bam File?
updated 3.9 years ago by 45k • written 12.9 years ago by ★ 1.3k
0
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0
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5.8k
views
Comment: Comment: Why Is The Tophat2 Unmapped.Bam File Larger Than The Accepted.Bam File?
updated 3.9 years ago by 45k • written 12.9 years ago by ★ 1.3k
4
votes
10
replies
5.8k
views
Why Is The Tophat2 Unmapped.Bam File Larger Than The Accepted.Bam File?
updated 3.9 years ago by 45k • written 12.9 years ago by ★ 1.3k
2
votes
1
reply
2.2k
views
What Does The Genome-Read-Mismatches Option Do Intophat
tophat
updated 12.9 years ago by 103k • written 12.9 years ago by ★ 1.3k
49
votes
28
replies
31k
views
12 follow
Trimming A Fastq File Representing Rna-Seq Data
fastq RNA-seq
updated 2.5 years ago by 45k • written 13.4 years ago by ★ 1.3k
2
votes
0
replies
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
12.9 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.0 years ago by Varun Gupta ★ 1.3k
0
votes
3
replies
12k
views
Htseq Count
rna seq htseq rna-seq
updated 13.1 years ago by ★ 4.3k • written 13.4 years ago by ★ 1.3k
13
votes
3
replies
9.8k
views
Homologous Genes In Mouse For Given Human Genes
genes
updated 13.1 years ago by 5.0k • written 13.1 years ago by ★ 1.3k
0
votes
1
reply
2.5k
views
Tophat Junctions Bed File Strand Column
strand
updated 13.2 years ago by 13k • written 13.2 years ago by ★ 1.3k
0
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1
reply
4.0k
views
Comment: C: How To Get Junctions File Using Gsnap
13.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
9.5k
views
Comment: C: Fastqc To Check The Quality Of High Throughput Sequence
13.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
9.5k
views
Comment: C: Fastqc To Check The Quality Of High Throughput Sequence
13.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
9.5k
views
Comment: C: Fastqc To Check The Quality Of High Throughput Sequence
13.3 years ago by Varun Gupta ★ 1.3k
0
votes
0
replies
3.3k
views
Comment: C: Using Fastqc To Check The Quality Of High Throughput Sequence
13.3 years ago by Varun Gupta ★ 1.3k
0
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1
reply
3.3k
views
Comment: C: Using Fastqc To Check The Quality Of High Throughput Sequence
13.3 years ago by Varun Gupta ★ 1.3k
0
votes
0
replies
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.3 years ago by Varun Gupta ★ 1.3k
0
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0
replies
8.1k
views
Comment: C: Behaviour Of Aligners For Occurence Of Lowercase And Upper Case Bases In A Fasta
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
8.1k
views
Comment: C: Behaviour Of Aligners For Occurence Of Lowercase And Upper Case Bases In A Fasta
13.4 years ago by Varun Gupta ★ 1.3k
0
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0
replies
8.1k
views
Comment: C: Behaviour Of Aligners For Occurence Of Lowercase And Upper Case Bases In A Fasta
13.4 years ago by Varun Gupta ★ 1.3k
3
votes
7
replies
8.1k
views
Behaviour Of Aligners For Occurence Of Lowercase And Upper Case Bases In A Fasta File
fasta
updated 13.4 years ago by ★ 2.4k • written 13.4 years ago by ★ 1.3k
32
votes
10
replies
53k
views
Filtering A Sam File For Quality Scores
sam
updated 13.4 years ago by 11k • written 13.4 years ago by ★ 1.3k
0
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0
replies
53k
views
Comment: C: Filtering A Sam File For Quality Scores
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
53k
views
Comment: C: Filtering A Sam File For Quality Scores
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
12k
views
Comment: C: Htseq Count
13.4 years ago by Varun Gupta ★ 1.3k
1
vote
2
replies
5.2k
views
Nm Accession Numbers To Get Mrna Seq
mrna seq
updated 13.4 years ago by ★ 1.7k • written 13.4 years ago by ★ 1.3k
0
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0
replies
31k
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Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
0
replies
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.4 years ago by Varun Gupta ★ 1.3k
0
votes
1
reply
31k
views
Comment: C: Trimming A Fastq File Representing Rna-Seq Data
13.4 years ago by Varun Gupta ★ 1.3k
10
votes
8
replies
7.5k
views
Read Counts In Intronic Region
read counts intron
updated 13.5 years ago by 20k • written 13.6 years ago by ★ 1.3k
225 results • Page 4 of 5
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