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0
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624
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Comment: Comment: Length Polymorphism using long read Nanopore
11 months ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
624
views
Length Polymorphism using long read Nanopore
genotyping nanopore
11 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
850
views
Comment: Comment: Issues with Minimap2 and ONT (Nanopore)
14 months ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
850
views
Issues with Minimap2 and ONT (Nanopore)
minimap nanopore
14 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
1.3k
views
Comment: Comment: Development plan for a bioinformatics database developer/coder
19 months ago by pixie@bioinfo ★ 1.5k
1
vote
3
replies
1.3k
views
Forum: Development plan for a bioinformatics database developer/coder
developer
19 months ago by pixie@bioinfo ★ 1.5k
1
vote
2
replies
688
views
Internal controls/ Reference Samples for Nanopore
nanopore
updated 21 months ago by ★ 3.1k • written 21 months ago by ★ 1.5k
0
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0
replies
1.6k
views
Comment: Comment: Regarding using a "pseudo reference genome" for aligning short reads
21 months ago by pixie@bioinfo ★ 1.5k
0
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1
reply
3.1k
views
Comment: Comment: WGCNA kME vs kWithin Hub Gene Disparities
22 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
490
views
Identifying Multipartite viruses (Viral Bioinformatics)
genomics
22 months ago by pixie@bioinfo ★ 1.5k
2
votes
3
replies
1.6k
views
Regarding using a "pseudo reference genome" for aligning short reads
genomics
21 months ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.1k
views
Comment: Comment: How to proceed after Kraken2 analysis
24 months ago by pixie@bioinfo ★ 1.5k
3
votes
3
replies
1.1k
views
How to proceed after Kraken2 analysis
rnaseq kraken
updated 24 months ago by ★ 3.1k • written 24 months ago by ★ 1.5k
31
votes
11
replies
8.5k
views
8 follow
Basics Of Systems Biology...
network
updated 2.3 years ago by • 0 • written 15.2 years ago by ★ 1.5k
2
votes
1
reply
1.0k
views
Sequence statistics to report viruses (or bacteria and fungi) using Nanopore for diagnostic purpose
nanopore
updated 2.6 years ago by 8.0k • written 2.7 years ago by ★ 1.5k
8
votes
4
replies
2.0k
views
Forum: Implementing FAIR data principles to a bioinformatics lab
data
updated 2.7 years ago by 23k • written 2.7 years ago by ★ 1.5k
0
votes
1
reply
746
views
Trimming SSR (repetitive primer) sequences
genomics
updated 3.0 years ago by 154k • written 3.0 years ago by ★ 1.5k
0
votes
3
replies
1.1k
views
Calculate distribution of reads over the reference genome
ngs
updated 3.1 years ago by 22k • written 3.1 years ago by ★ 1.5k
1
vote
2
replies
1.0k
views
Identifying reliable regions of reference genomes
snp genomics
updated 3.2 years ago by ★ 2.2k • written 3.2 years ago by ★ 1.5k
0
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1
reply
1.4k
views
Comment: Comment: Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
3.3 years ago by pixie@bioinfo ★ 1.5k
0
votes
3
replies
1.4k
views
Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
Illumina mini-seq
updated 3.3 years ago by 154k • written 3.3 years ago by ★ 1.5k
0
votes
0
replies
972
views
Forum: Bioinformatics for understanding cancer and other diseases
cancer omics
updated 2.9 years ago by 45k • written 3.4 years ago by ★ 1.5k
0
votes
0
replies
666
views
pysam fetch alignments corresponding to a taxid
pysam samtools
3.5 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
1.0k
views
Comment: Comment: How to calculate p-value for Network Data (Cluster Detection)
3.5 years ago by pixie@bioinfo ★ 1.5k
0
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2
replies
1.0k
views
How to calculate p-value for Network Data (Cluster Detection)
network correlation
3.5 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
634
views
Diagnostic Plots for SNP quality assesment
vcf
3.7 years ago by pixie@bioinfo ★ 1.5k
2
votes
1
reply
1.4k
views
VCF file, calculate depth per sample
vcf bcftools
updated 3.7 years ago by ▴ 540 • written 3.7 years ago by ★ 1.5k
0
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1
reply
1.0k
views
Comment: Comment: Identify predicted TF targets by binding motif
3.7 years ago by pixie@bioinfo ★ 1.5k
0
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1
reply
1.2k
views
Problem with VCF format while using "VariantAnnotation" R package
vcf
updated 3.7 years ago by ★ 1.7k • written 3.8 years ago by ★ 1.5k
8
votes
11
replies
8.3k
views
6 follow
Heatmap In R-Wgcna-->Error While Plotting Tom
r heatmap
updated 3.8 years ago by • 0 • written 12.3 years ago by ★ 1.5k
0
votes
0
replies
679
views
Information about Genotyping by Sequencing (GBS)
snp
updated 3.9 years ago by 154k • written 3.9 years ago by ★ 1.5k
0
votes
0
replies
879
views
Create combined CpG and non-CpG bedgraphs for DNA methylation using Bismark
methylation
4.1 years ago by pixie@bioinfo ★ 1.5k
2
votes
2
replies
1.2k
views
R programming: basics to challenging
R
updated 4.3 years ago by 89k • written 4.3 years ago by ★ 1.5k
0
votes
1
reply
1.7k
views
Plots for Correlation between two dataframes by row
R
updated 4.4 years ago by 89k • written 4.4 years ago by ★ 1.5k
0
votes
2
replies
1.0k
views
Ideas to represent RNA-seq expression profile (Z-scores) and the significance level at the same time
R RNAseq
updated 4.4 years ago by ★ 3.0k • written 4.4 years ago by ★ 1.5k
2
votes
9
replies
25k
views
7 follow
HISAT error: Encountered internal HISAT2 exception (#1)
RNA-Seq
updated 4.5 years ago by • 0 • written 8.4 years ago by ★ 1.5k
0
votes
1
reply
1.5k
views
Segmentation fault with HOMER
homer HiC
updated 3.8 years ago by • 0 • written 4.6 years ago by ★ 1.5k
2
votes
3
replies
3.6k
views
Forum: MOOC for AI and Machine learning for Bioinformatics
ML AI
updated 2.6 years ago by 45k • written 5.2 years ago by ★ 1.5k
0
votes
1
reply
840
views
P value for test for proportions and random sampling
R
4.8 years ago by pixie@bioinfo ★ 1.5k
2
votes
0
replies
1.9k
views
Answer: A: Self Organizing Maps for RNA-seq data
updated 4.9 years ago by 154k • written 4.9 years ago by ★ 1.5k
4
votes
3
replies
1.9k
views
Self Organizing Maps for RNA-seq data
RNA-Seq
4.9 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
1.9k
views
Comment: C: Self Organizing Maps for RNA-seq data
4.9 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
2.5k
views
Comment: C: Using Deeptool for profile plots
4.9 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
2.5k
views
Comment: C: Using Deeptool for profile plots
5.0 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
2.5k
views
Comment: C: Using Deeptool for profile plots
5.0 years ago by pixie@bioinfo ★ 1.5k
2
votes
5
replies
2.5k
views
Using Deeptool for profile plots
deeptools
5.0 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
992
views
Issue with Diffreps
ChIP-Seq
5.0 years ago by pixie@bioinfo ★ 1.5k
4
votes
2
replies
3.5k
views
Bismark: bedgraph to bigwig for DNA methylation
methylation
updated 5.0 years ago by ▴ 20 • written 5.1 years ago by ★ 1.5k
0
votes
0
replies
865
views
Ideas Regarding TF regulatory network
network
5.0 years ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
2.2k
views
CUT&RUN analysis pipeline
alignment sequencing
updated 4 months ago by • 0 • written 5.0 years ago by ★ 1.5k
259 results • Page 1 of 6
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