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Heatmap for GISTIC2.0
R CNV GISTIC2.0 heatmap
updated 4.1 years ago by • 0 • written 6.1 years ago by ▴ 150
11
votes
8
replies
14k
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Question: Convert Ensembl Transcript Ids Ensmust To Gene Symbol In R
R ENSEMBL gene
updated 4.0 years ago by 89k • written 4.6 years ago by ▴ 150
3
votes
1
reply
14k
views
Answer: A: Question: Convert Ensembl Transcript Ids Ensmust To Gene Symbol In R
4.6 years ago by sugus ▴ 150
0
votes
2
replies
1.7k
views
Interpretation the percentage of top 10 mutated gene in plotmafSummary result
R maftools mutation
updated 6.0 years ago by ★ 7.7k • written 6.0 years ago by ▴ 150
0
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0
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6.0k
views
Comment: C: GSEA results change in clusterProfiler
6.1 years ago by sugus ▴ 150
0
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1
reply
1.9k
views
DMRcate results: How to interpret the overlapping.promoters
DMRcate DNA methylation R CHAMP
6.2 years ago by sugus ▴ 150
0
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1
reply
11k
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Comment: C: How single sample GSEA works
6.2 years ago by sugus ▴ 150
1
vote
2
replies
1.5k
views
Mouse RNA-seq research
Mouse RNA-Seq Human
6.3 years ago by sugus ▴ 150
0
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1
reply
11k
views
Comment: C: How single sample GSEA works
6.3 years ago by sugus ▴ 150
0
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0
replies
11k
views
Comment: C: How single sample GSEA works
6.3 years ago by sugus ▴ 150
1
vote
7
replies
11k
views
How single sample GSEA works
ssgsea RNA-seq R GSVA
updated 6.3 years ago by 89k • written 6.3 years ago by ▴ 150
0
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0
replies
1.4k
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Comment: C: How to determine subtype-specific mutations?
6.3 years ago by sugus ▴ 150
1
vote
0
replies
2.8k
views
Comment: C: Using Varscan without a matched normal
6.3 years ago by sugus ▴ 150
0
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1
reply
2.8k
views
Comment: C: Using Varscan without a matched normal
6.3 years ago by sugus ▴ 150
4
votes
4
replies
2.8k
views
Using Varscan without a matched normal
varscan WES
updated 6.3 years ago by 22k • written 6.3 years ago by ▴ 150
0
votes
2
replies
1.4k
views
How to determine subtype-specific mutations?
mutation exome-sequencing subtypes
6.3 years ago by sugus ▴ 150
2
votes
3
replies
4.8k
views
customized clusterAlg of NMF in consensusClusterPlus
R NMF consensus cluster
updated 6.5 years ago by 20 • written 7.9 years ago by ▴ 150
0
votes
3
replies
2.2k
views
How to remove batch effect in copy number segment mean
Combat CNA Batch-Effect
updated 18 months ago by 45k • written 7.0 years ago by ▴ 150
0
votes
1
reply
2.2k
views
Comment: C: How to remove batch effect in copy number segment mean
7.0 years ago by sugus ▴ 150
0
votes
0
replies
2.5k
views
Comment: C: ANNOVAR annotate frameshift
7.0 years ago by sugus ▴ 150
1
vote
3
replies
2.5k
views
ANNOVAR annotate frameshift
ANNOVAR mutation variant exonic
7.0 years ago by sugus ▴ 150
1
vote
0
replies
2.5k
views
Answer: A: ANNOVAR annotate frameshift
7.0 years ago by sugus ▴ 150
3
votes
1
reply
4.2k
views
extract gseaResult in clusterprofiler
clusterProfiler GSEA
updated 7.1 years ago by ★ 2.6k • written 7.1 years ago by ▴ 150
0
votes
0
replies
6.0k
views
Comment: C: GSEA results change in clusterProfiler
7.1 years ago by sugus ▴ 150
0
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0
replies
6.0k
views
Comment: C: GSEA results change in clusterProfiler
7.1 years ago by sugus ▴ 150
0
votes
0
replies
6.0k
views
Comment: C: GSEA results change in clusterProfiler
7.1 years ago by sugus ▴ 150
5
votes
8
replies
6.0k
views
GSEA results change in clusterProfiler
clusterProfiler GSEA
updated 7.1 years ago by ★ 2.6k • written 7.1 years ago by ▴ 150
0
votes
0
replies
2.5k
views
How to customized CpGlist or Genelist in chAMP.gsea
chAMP GSEA
7.2 years ago by sugus ▴ 150
0
votes
0
replies
2.6k
views
SubMap in GenePattern
SubMap GenePattern cls
7.4 years ago by sugus ▴ 150
0
votes
0
replies
12k
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Comment: C: No result in enrichGO
7.5 years ago by sugus ▴ 150
0
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0
replies
12k
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Comment: C: No result in enrichGO
7.5 years ago by sugus ▴ 150
0
votes
1
reply
12k
views
Comment: C: No result in enrichGO
7.5 years ago by sugus ▴ 150
3
votes
7
replies
12k
views
No result in enrichGO
R clusterProfiler enrichGO
updated 7.5 years ago by ▴ 40 • written 7.5 years ago by ▴ 150
5
votes
3
replies
6.5k
views
Reorder dendrogram for a better heat map
R dendrogram reorder
updated 7.5 years ago by 89k • written 7.5 years ago by ▴ 150
0
votes
1
reply
4.7k
views
Comment: C: How to get a matrix gene weights in NMF
7.6 years ago by sugus ▴ 150
3
votes
6
replies
4.7k
views
How to get a matrix gene weights in NMF
NMF weight matrix R
updated 7.6 years ago by 15k • written 7.6 years ago by ▴ 150
0
votes
1
reply
2.0k
views
How RnBeads define promoters?
RnBeads Promoters TSS
updated 7.8 years ago by 5.8k • written 7.9 years ago by ▴ 150
1
vote
1
reply
1.8k
views
Error in RnBeads when customizing promoters
RnBeads promoters R
7.8 years ago by sugus ▴ 150
0
votes
0
replies
1.3k
views
get error from running any command on RnBeads when reopen R
RnBeads R
7.9 years ago by sugus ▴ 150
0
votes
1
reply
2.7k
views
Comment: C: differential methylated probe analysis
7.9 years ago by sugus ▴ 150
0
votes
3
replies
2.7k
views
differential methylated probe analysis
R methylation differential methylated beta value
7.9 years ago by sugus ▴ 150
0
votes
0
replies
4.8k
views
Comment: C: customized clusterAlg of NMF in consensusClusterPlus
7.9 years ago by sugus ▴ 150
0
votes
0
replies
2.1k
views
How to construct Bayesian regulatory network in R with gene expression profile
R gene Bayesian regulatory network
8.8 years ago by sugus ▴ 150
0
votes
0
replies
3.8k
views
Answer: A: Bayesian Network from R to visualize in cytoscape
8.8 years ago by sugus ▴ 150
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