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Heatmap for GISTIC2.0
R CNV GISTIC2.0 heatmap
updated 2.6 years ago by • 0 • written 4.6 years ago by ▴ 150
11
votes
8
replies
9.9k
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Question: Convert Ensembl Transcript Ids Ensmust To Gene Symbol In R
R ENSEMBL gene
updated 2.5 years ago by 87k • written 3.1 years ago by ▴ 150
3
votes
1
reply
9.9k
views
Answer: A: Question: Convert Ensembl Transcript Ids Ensmust To Gene Symbol In R
3.1 years ago by sugus ▴ 150
0
votes
2
replies
1.3k
views
Interpretation the percentage of top 10 mutated gene in plotmafSummary result
R maftools mutation
updated 4.5 years ago by ★ 5.8k • written 4.5 years ago by ▴ 150
0
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0
replies
4.7k
views
Comment: C: GSEA results change in clusterProfiler
4.6 years ago by sugus ▴ 150
0
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1
reply
1.5k
views
DMRcate results: How to interpret the overlapping.promoters
DMRcate DNA methylation R CHAMP
4.7 years ago by sugus ▴ 150
0
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1
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8.7k
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Comment: C: How single sample GSEA works
4.7 years ago by sugus ▴ 150
1
vote
2
replies
1.1k
views
Mouse RNA-seq research
Mouse RNA-Seq Human
4.8 years ago by sugus ▴ 150
0
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1
reply
8.7k
views
Comment: C: How single sample GSEA works
4.8 years ago by sugus ▴ 150
0
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0
replies
8.7k
views
Comment: C: How single sample GSEA works
4.8 years ago by sugus ▴ 150
1
vote
7
replies
8.7k
views
How single sample GSEA works
ssgsea RNA-seq R GSVA
updated 4.8 years ago by 87k • written 4.8 years ago by ▴ 150
0
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0
replies
983
views
Comment: C: How to determine subtype-specific mutations?
4.8 years ago by sugus ▴ 150
1
vote
0
replies
2.0k
views
Comment: C: Using Varscan without a matched normal
4.8 years ago by sugus ▴ 150
0
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1
reply
2.0k
views
Comment: C: Using Varscan without a matched normal
4.8 years ago by sugus ▴ 150
4
votes
4
replies
2.0k
views
Using Varscan without a matched normal
varscan WES
updated 4.8 years ago by 22k • written 4.8 years ago by ▴ 150
0
votes
2
replies
983
views
How to determine subtype-specific mutations?
mutation exome-sequencing subtypes
4.8 years ago by sugus ▴ 150
2
votes
3
replies
4.1k
views
customized clusterAlg of NMF in consensusClusterPlus
R NMF consensus cluster
updated 5.0 years ago by 20 • written 6.4 years ago by ▴ 150
0
votes
3
replies
1.8k
views
How to remove batch effect in copy number segment mean
Combat CNA Batch-Effect
updated 8 days ago by 43k • written 5.5 years ago by ▴ 150
0
votes
1
reply
1.8k
views
Comment: C: How to remove batch effect in copy number segment mean
5.5 years ago by sugus ▴ 150
0
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0
replies
2.0k
views
Comment: C: ANNOVAR annotate frameshift
5.5 years ago by sugus ▴ 150
1
vote
0
replies
2.0k
views
Answer: A: ANNOVAR annotate frameshift
5.5 years ago by sugus ▴ 150
1
vote
3
replies
2.0k
views
ANNOVAR annotate frameshift
ANNOVAR mutation variant exonic
5.5 years ago by sugus ▴ 150
3
votes
1
reply
3.4k
views
extract gseaResult in clusterprofiler
clusterProfiler GSEA
updated 5.6 years ago by ★ 2.6k • written 5.6 years ago by ▴ 150
0
votes
0
replies
4.7k
views
Comment: C: GSEA results change in clusterProfiler
5.6 years ago by sugus ▴ 150
0
votes
0
replies
4.7k
views
Comment: C: GSEA results change in clusterProfiler
5.6 years ago by sugus ▴ 150
0
votes
0
replies
4.7k
views
Comment: C: GSEA results change in clusterProfiler
5.6 years ago by sugus ▴ 150
5
votes
8
replies
4.7k
views
GSEA results change in clusterProfiler
clusterProfiler GSEA
updated 5.6 years ago by ★ 2.6k • written 5.6 years ago by ▴ 150
0
votes
0
replies
2.1k
views
How to customized CpGlist or Genelist in chAMP.gsea
chAMP GSEA
5.7 years ago by sugus ▴ 150
0
votes
0
replies
2.3k
views
SubMap in GenePattern
SubMap GenePattern cls
5.9 years ago by sugus ▴ 150
0
votes
0
replies
10k
views
Comment: C: No result in enrichGO
6.0 years ago by sugus ▴ 150
0
votes
0
replies
10k
views
Comment: C: No result in enrichGO
6.0 years ago by sugus ▴ 150
0
votes
1
reply
10k
views
Comment: C: No result in enrichGO
6.0 years ago by sugus ▴ 150
3
votes
7
replies
10k
views
No result in enrichGO
R clusterProfiler enrichGO
updated 6.0 years ago by ▴ 40 • written 6.0 years ago by ▴ 150
5
votes
3
replies
5.4k
views
Reorder dendrogram for a better heat map
R dendrogram reorder
updated 6.0 years ago by 87k • written 6.0 years ago by ▴ 150
0
votes
1
reply
3.7k
views
Comment: C: How to get a matrix gene weights in NMF
6.1 years ago by sugus ▴ 150
3
votes
6
replies
3.7k
views
How to get a matrix gene weights in NMF
NMF weight matrix R
updated 6.1 years ago by 14k • written 6.1 years ago by ▴ 150
0
votes
1
reply
1.7k
views
How RnBeads define promoters?
RnBeads Promoters TSS
updated 6.3 years ago by 5.7k • written 6.4 years ago by ▴ 150
1
vote
1
reply
1.5k
views
Error in RnBeads when customizing promoters
RnBeads promoters R
6.4 years ago by sugus ▴ 150
0
votes
0
replies
1.1k
views
get error from running any command on RnBeads when reopen R
RnBeads R
6.4 years ago by sugus ▴ 150
0
votes
1
reply
2.4k
views
Comment: C: differential methylated probe analysis
6.4 years ago by sugus ▴ 150
0
votes
3
replies
2.4k
views
differential methylated probe analysis
R methylation differential methylated beta value
6.4 years ago by sugus ▴ 150
0
votes
0
replies
4.1k
views
Comment: C: customized clusterAlg of NMF in consensusClusterPlus
6.4 years ago by sugus ▴ 150
0
votes
0
replies
1.9k
views
How to construct Bayesian regulatory network in R with gene expression profile
R gene Bayesian regulatory network
7.3 years ago by sugus ▴ 150
0
votes
0
replies
3.2k
views
Answer: A: Bayesian Network from R to visualize in cytoscape
7.3 years ago by sugus ▴ 150
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