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Comment: Comment: What is the maximum size of fasta file i can use for repeatmasker?
3.3 years ago by PK ▴ 130
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1.6k
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Comment: Comment: What is the maximum size of fasta file i can use for repeatmasker?
3.3 years ago by PK ▴ 130
0
votes
4
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1.6k
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What is the maximum size of fasta file i can use for repeatmasker?
RNAseq Repeatmasker repititive elements
3.3 years ago by PK ▴ 130
0
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1
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2.7k
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Comment: Comment: RepeatMasker error
3.3 years ago by PK ▴ 130
0
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1
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2.7k
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Comment: Comment: RepeatMasker error
3.3 years ago by PK ▴ 130
0
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1
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2.7k
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Comment: Comment: RepeatMasker error
3.3 years ago by PK ▴ 130
0
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1
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2.7k
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Comment: Comment: RepeatMasker error
3.3 years ago by PK ▴ 130
1
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1
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2.7k
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Comment: Comment: RepeatMasker error
3.3 years ago by PK ▴ 130
3
votes
11
replies
2.7k
views
RepeatMasker error
repeatmasking transciptome RNA-seq
updated 3.3 years ago by ★ 2.0k • written 3.3 years ago by ▴ 130
1
vote
1
reply
963
views
Where to find terra (telomeric RNA) coordinates?
rnaseq Alignment mapping
updated 3.4 years ago by 28k • written 3.4 years ago by ▴ 130
0
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0
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1.6k
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Comment: Comment: How to integrate multi omics data in cytoscape
3.4 years ago by PK ▴ 130
1
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2
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1.6k
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How to integrate multi omics data in cytoscape
cytoscape protein-protein interaction network
3.4 years ago by PK ▴ 130
2
votes
1
reply
919
views
Is it possible to find the mutation in RNA-seq reads?
RNA-seq mapping clip-seq
updated 3.5 years ago by 9.0k • written 3.5 years ago by ▴ 130
1
vote
1
reply
735
views
where can i find all TE elements GTF?
peakcalling RNAseq clipseq
updated 3.7 years ago by 56k • written 3.7 years ago by ▴ 130
0
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1
reply
960
views
Comment: Comment: Piranha peak calling waring message?
3.8 years ago by PK ▴ 130
0
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2
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960
views
Piranha peak calling waring message?
RNA-seq peak-calling piranha
updated 3.4 years ago by 45k • written 3.8 years ago by ▴ 130
0
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0
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850
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Comment: Comment: How to subset peaks based on RNA sub class?
3.8 years ago by PK ▴ 130
0
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2
replies
850
views
How to subset peaks based on RNA sub class?
peakcalling RNAseq clipseq
3.8 years ago by PK ▴ 130
0
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0
replies
1.1k
views
Comment: Comment: How to do the peak calling for introns?
3.8 years ago by PK ▴ 130
0
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2
replies
1.1k
views
How to do the peak calling for introns?
RNAseq clipseq peakcalling
3.8 years ago by PK ▴ 130
0
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0
replies
620
views
How to analyse RNA-based protein pulldown mass spectrometry data
proteomics R maxquant limma
4.4 years ago by PK ▴ 130
0
votes
1
reply
1.2k
views
How can i handle the multimapped reads?
assembly sequencing alignment
updated 4.4 years ago by • 0 • written 4.7 years ago by ▴ 130
1
vote
1
reply
746
views
Extract co-ordinate for iCLIP data?
sequencing linux RNA
updated 4.4 years ago by 103k • written 4.4 years ago by ▴ 130
0
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0
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4.5k
views
Comment: C: How to calculate per base coverage from the .bam file?
6.1 years ago by PK ▴ 130
5
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6
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4.5k
views
How to calculate per base coverage from the .bam file?
RNA-Seq next-gen R
updated 6.1 years ago by 90k • written 6.1 years ago by ▴ 130
0
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0
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4.5k
views
Comment: C: How to calculate per base coverage from the .bam file?
6.1 years ago by PK ▴ 130
0
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3
replies
1.8k
views
Export error WITH AGP?
software error genome next-gen alignment
updated 6.1 years ago by ▴ 280 • written 8.4 years ago by ▴ 130
0
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1
reply
4.5k
views
Comment: C: How to calculate per base coverage from the .bam file?
6.1 years ago by PK ▴ 130
0
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0
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852
views
how to define more stringent parameters for the snoscan to indentify snoRNA target on rRNA?
sequence rna-seq genome
6.3 years ago by PK ▴ 130
1
vote
3
replies
1.4k
views
How to extract un annotated (With abundant) small RNA transcript?
RNA-Seq sequencing Assembly
updated 6.8 years ago by 12k • written 6.8 years ago by ▴ 130
0
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0
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1.4k
views
Comment: C: How to extract un annotated (With abundant) small RNA transcript?
6.8 years ago by PK ▴ 130
17
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13
replies
21k
views
8 follow
duplicate 'row.names' are not allowed
RNA-Seq software error R
updated 6.8 years ago by ▴ 10 • written 7.4 years ago by ▴ 130
1
vote
2
replies
2.4k
views
multicuv error Could not find indexes
RNA-Seq alignment software error
updated 7.4 years ago by ★ 1.7k • written 7.4 years ago by ▴ 130
0
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2
replies
21k
views
Comment: C: duplicate 'row.names' are not allowed
7.4 years ago by PK ▴ 130
0
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0
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21k
views
Comment: C: duplicate 'row.names' are not allowed
7.4 years ago by PK ▴ 130
0
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0
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3.1k
views
Comment: C: how to find new transcript from bam file?
7.5 years ago by PK ▴ 130
0
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1
reply
6.1k
views
Comment: C: memory is low reading termination?
7.5 years ago by PK ▴ 130
0
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1
reply
6.1k
views
Comment: C: memory is low reading termination?
7.5 years ago by PK ▴ 130
2
votes
4
replies
6.1k
views
memory is low reading termination?
RNA-Seq alignment next-gen
updated 7.5 years ago by 154k • written 7.5 years ago by ▴ 130
0
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1
reply
3.1k
views
Comment: C: how to find new transcript from bam file?
7.5 years ago by PK ▴ 130
3
votes
6
replies
3.1k
views
how to find new transcript from bam file?
next-gen alignment RNA-Seq
updated 7.5 years ago by ▴ 740 • written 7.5 years ago by ▴ 130
1
vote
4
replies
2.1k
views
Any possible to run cuffdiff without cuffqunt?
RNA-Seq software error next-gen
updated 8.2 years ago by 20 • written 8.7 years ago by ▴ 130
0
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0
replies
1.8k
views
Comment: C: Export error WITH AGP?
8.4 years ago by PK ▴ 130
0
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1
reply
6.8k
views
Comment: C: How to import reference genome in CLC genomics workbench?
8.4 years ago by PK ▴ 130
0
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1
reply
6.8k
views
Comment: C: How to import reference genome in CLC genomics workbench?
8.4 years ago by PK ▴ 130
3
votes
8
replies
6.8k
views
How to import reference genome in CLC genomics workbench?
software error next-gen genome
updated 8.4 years ago by 5.9k • written 8.4 years ago by ▴ 130
0
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1
reply
6.8k
views
Comment: C: How to import reference genome in CLC genomics workbench?
8.4 years ago by PK ▴ 130
0
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1
reply
5.3k
views
Comment: C: error installing cummerbund in R studio
8.4 years ago by PK ▴ 130
0
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0
replies
5.3k
views
Comment: C: error installing cummerbund in R studio
8.4 years ago by PK ▴ 130
0
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1
reply
5.3k
views
Comment: C: error installing cummerbund in R studio
8.4 years ago by PK ▴ 130
149 results • Page 2 of 3
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