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Comment: Comment: Problem to create count file through HTSeq application
12 weeks ago by modarzi ▴ 160
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2
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468
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Problem to create count file through HTSeq application
HTSeq RNA-seq count HISAT2
12 weeks ago by modarzi ▴ 160
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0
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389
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Comment: Comment: how to map peptide to Protein?
3 months ago by modarzi ▴ 160
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2
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389
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how to map peptide to Protein?
protein Proteomics peptide TCGA
3 months ago by modarzi ▴ 160
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0
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217
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How does find relative pathway to transfer RNA?
pathway downstream tRNA
14 months ago by modarzi ▴ 160
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1
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709
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Comment: Comment: how does annotate circular RNA ?
15 months ago by modarzi ▴ 160
3
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3
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709
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how does annotate circular RNA ?
R Genome circular RNA Position
updated 15 months ago by ★ 1.1k • written 15 months ago by ▴ 160
7
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7
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1.5k
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problem for gene survival analysis through "Survival" package in R
TCGA Survival Analysis Gene Survival Analysis R
updated 19 months ago by ▴ 50 • written 4.3 years ago by ▴ 160
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0
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887
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Comment: Comment: how to solve this error when I want to install HISAT2? "E: Unable to locate pack
19 months ago by modarzi ▴ 160
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2
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887
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how to solve this error when I want to install HISAT2? "E: Unable to locate package hisat2"
hisat2 aligner
19 months ago by modarzi ▴ 160
0
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1
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391
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How does find the sequence of each oligonucleotide in microarray probe?
Affymetrics technology probe microarray
updated 20 months ago by 21k • written 20 months ago by ▴ 160
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1
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553
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Comment: C: how to annotate Circular RNA gene type?
2.1 years ago by modarzi ▴ 160
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3
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553
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how to annotate Circular RNA gene type?
RNA-Seq Circular RNA annotation
2.1 years ago by modarzi ▴ 160
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5
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652
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should each RNA-seq has Circular RNA?
alignment RNA-Seq Circular RNA CIRI2
written 2.2 years ago by ▴ 160
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0
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647
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Comment: C: problem to aligning FASTQ through BWA aligner
2.1 years ago by modarzi ▴ 160
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0
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647
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Comment: C: problem to aligning FASTQ through BWA aligner
2.1 years ago by modarzi ▴ 160
3
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5
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647
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problem to aligning FASTQ through BWA aligner
genome BWA alignment
updated 2.1 years ago by 3.2k • written 2.1 years ago by ▴ 160
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1
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784
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Comment: C: is "sequence Duplication levels" has bad effect on Alignment process?
2.2 years ago by modarzi ▴ 160
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0
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784
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Comment: C: is "sequence Duplication levels" has bad effect on Alignment process?
2.2 years ago by modarzi ▴ 160
2
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6
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784
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is "sequence Duplication levels" has bad effect on Alignment process?
bwa FastQC RNA-seq
updated 2.2 years ago by 71k • written 2.2 years ago by ▴ 160
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2
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926
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Comment: C: what should be view inside of SAM file?
2.2 years ago by modarzi ▴ 160
7
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6
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926
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what should be view inside of SAM file?
SAM BWA
updated 2.2 years ago by ★ 5.1k • written 2.2 years ago by ▴ 160
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1
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652
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Comment: C: should each RNA-seq has Circular RNA?
2.2 years ago by modarzi ▴ 160
0
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1
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652
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Comment: C: should each RNA-seq has Circular RNA?
2.2 years ago by modarzi ▴ 160
0
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0
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729
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how to find consensus modules between 2 datasets by different platform through WGCNA
WGCNA consensus module RNA-seq microarray
2.4 years ago by modarzi ▴ 160
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1
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1.1k
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Comment: C: How can I annotate microarray data set through Ensemble Id?
2.7 years ago by modarzi ▴ 160
1
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3
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1.1k
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How can I annotate microarray data set through Ensemble Id?
Affymetrix Ensemble Id GPL 96
updated 16 months ago by ★ 1.8k • written 2.7 years ago by ▴ 160
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1
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1.0k
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Comment: C: how does find the normalization method in GSE in GEO for microarray data?
2.7 years ago by modarzi ▴ 160
0
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1
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1.0k
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Comment: C: how does find the normalization method in GSE in GEO for microarray data?
2.7 years ago by modarzi ▴ 160
2
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5
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1.0k
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how does find the normalization method in GSE in GEO for microarray data?
MAS 5.0 method normalization microarray
2.7 years ago by modarzi ▴ 160
0
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0
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699
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finding AUC and AUCPR in gene regulatory network through ARACNE and CLR methods
AUC AUCPR GRN ARACNE CKR
2.8 years ago by modarzi ▴ 160
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0
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5.5k
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Comment: C: How to compare 2 separate coexpression networks each with the same genes?
2.8 years ago by modarzi ▴ 160
0
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0
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1.5k
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Comment: C: Problem relate to running ClueGO in Cytoscape
2.8 years ago by modarzi ▴ 160
4
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2
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1.5k
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Problem relate to running ClueGO in Cytoscape
Cytoscape ClueGO CluePedia
updated 2.9 years ago by ▴ 600 • written 2.9 years ago by ▴ 160
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1
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3.0k
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Comment: C: Problem for Running "multivariate Cox proportional hazards model"
3.0 years ago by modarzi ▴ 160
0
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1
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3.0k
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Comment: C: Problem for Running "multivariate Cox proportional hazards model"
3.0 years ago by modarzi ▴ 160
0
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2
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3.0k
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Comment: C: Problem for Running "multivariate Cox proportional hazards model"
3.0 years ago by modarzi ▴ 160
0
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1
reply
3.0k
views
Comment: C: Problem for Running "multivariate Cox proportional hazards model"
3.0 years ago by modarzi ▴ 160
0
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1
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3.0k
views
Comment: C: Problem for Running "multivariate Cox proportional hazards model"
3.0 years ago by modarzi ▴ 160
2
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12
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3.0k
views
Problem for Running "multivariate Cox proportional hazards model"
multivariate Cox Survival Analysis cox regression
updated 14 months ago by • 0 • written 3.0 years ago by ▴ 160
0
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1
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29k
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Comment: C: Survival analysis with gene expression
3.2 years ago by modarzi ▴ 160
0
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1
reply
29k
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Comment: C: Survival analysis with gene expression
3.2 years ago by modarzi ▴ 160
0
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1
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29k
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Comment: C: Survival analysis with gene expression
3.2 years ago by modarzi ▴ 160
0
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1
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29k
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Comment: C: Survival analysis with gene expression
3.2 years ago by modarzi ▴ 160
0
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1
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29k
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Comment: C: Survival analysis with gene expression
3.2 years ago by modarzi ▴ 160
2
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3
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1.6k
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Comment: C: How to convert the ordinal categorical trait in the WGCNA?
3.2 years ago by modarzi ▴ 160
1
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0
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583
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How to use Sex of Patients for Constructing Co-expression Network through WGCNA
RNA-Seq WGCNA
3.3 years ago by modarzi ▴ 160
0
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1
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1.2k
views
Comment: C: which Length of gene is valid for using in Transcript Per million (TPM)?
3.3 years ago by modarzi ▴ 160
3
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4
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1.2k
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which Length of gene is valid for using in Transcript Per million (TPM)?
RNA-Seq Normalization TPM
updated 3.3 years ago by 84k • written 3.3 years ago by ▴ 160
0
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0
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42k
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Comment: C: Using transcripts per million (TPM)
3.3 years ago by modarzi ▴ 160
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