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0
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6
replies
2.2k
views
B allele frequency (BAF)
snp
updated 23 months ago by ★ 3.3k • written 23 months ago by ▴ 60
0
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1
reply
2.2k
views
Comment: C: B allele frequency (BAF)
23 months ago by rthapa ▴ 60
0
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0
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2.2k
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Comment: C: B allele frequency (BAF)
23 months ago by rthapa ▴ 60
0
votes
0
replies
861
views
Comment: C: KaryoploteR for copy number
2.1 years ago by rthapa ▴ 60
0
votes
3
replies
861
views
KaryoploteR for copy number
genome KaryoploteR
updated 2.1 years ago by 7.6k • written 2.1 years ago by ▴ 60
3
votes
1
reply
1.3k
views
quality check of vcf files
vcf SNP
updated 2.2 years ago by ▴ 200 • written 2.2 years ago by ▴ 60
0
votes
0
replies
492
views
CNVRs visualization with karyoploteR
cnv
2.2 years ago by rthapa ▴ 60
0
votes
0
replies
354
views
Phenotypic evaluation of significant SNPs from GWAS result
SNP
2.3 years ago by rthapa ▴ 60
0
votes
0
replies
612
views
GWAS of ordinal phenotypes with MCMCglmm model
SNP r
2.4 years ago by rthapa ▴ 60
0
votes
0
replies
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
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1
reply
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
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0
replies
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
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1
reply
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
votes
2
replies
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
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0
replies
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
votes
12
replies
2.4k
views
error reading bed files for bedtools intersect
bedtools intersect
updated 2.6 years ago by 147k • written 2.6 years ago by ▴ 60
0
votes
0
replies
2.4k
views
Comment: C: error reading bed files for bedtools intersect
2.6 years ago by rthapa ▴ 60
0
votes
0
replies
907
views
GO term using GOAtools
GOAtools
2.6 years ago by rthapa ▴ 60
0
votes
1
reply
533
views
Comment: C: methylation coverage in the gene region
2.8 years ago by rthapa ▴ 60
0
votes
3
replies
533
views
methylation coverage in the gene region
methylation
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
3.9k
views
Comment: C: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
2.8 years ago by rthapa ▴ 60
0
votes
1
reply
3.9k
views
Answer: A: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
629
views
codon adaptation index (CAI) estimation
codon usage
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
570
views
codon bias estimation (CAI)
protein
2.8 years ago by rthapa ▴ 60
0
votes
1
reply
804
views
methylation coverage in the gene region
methylation
updated 2.8 years ago by 64k • written 2.8 years ago by ▴ 60
0
votes
1
reply
718
views
Comment: C: coverage of narrow peaks on genomic region using bedtools
2.8 years ago by rthapa ▴ 60
1
vote
3
replies
718
views
coverage of narrow peaks on genomic region using bedtools
ChIP-Seq
updated 2.8 years ago by ★ 3.7k • written 2.8 years ago by ▴ 60
0
votes
0
replies
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
0
votes
1
reply
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
0
votes
1
reply
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
0
votes
1
reply
3.2k
views
Comment: C: pysam alignment error
2.8 years ago by rthapa ▴ 60
4
votes
13
replies
3.2k
views
pysam alignment error
alignment
updated 2.8 years ago by ▴ 570 • written 2.8 years ago by ▴ 60
0
votes
1
reply
517
views
parent GO terms
genome
2.8 years ago by rthapa ▴ 60
3
votes
1
reply
565
views
Chip seq coverage
ChIP-Seq
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
470
views
SNP density per genes
SNP
2.8 years ago by rthapa ▴ 60
0
votes
0
replies
3.0k
views
Comment: C: CAI in python: SeqUtils.CodonUsage vs CAI package
2.9 years ago by rthapa ▴ 60
0
votes
0
replies
554
views
Maximum intensity among overlapping peaks and peak coverage
ChIP-Seq
2.9 years ago by rthapa ▴ 60
0
votes
1
reply
1.4k
views
DESeq2 lfc shrinkage
rna-seq
updated 3.2 years ago by ▴ 470 • written 4.6 years ago by ▴ 60
0
votes
1
reply
660
views
Significance level of each variable used in the model
RNA-Seq
updated 3.4 years ago by 82k • written 3.4 years ago by ▴ 60
0
votes
0
replies
3.0k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
updated 3.4 years ago by 82k • written 3.4 years ago by ▴ 60
0
votes
0
replies
2.8k
views
Comment: C: Preforming differential expression (DE) on edgeR with control and different geno
3.4 years ago by rthapa ▴ 60
0
votes
1
reply
3.0k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
3.4 years ago by rthapa ▴ 60
0
votes
0
replies
2.7k
views
Comment: C: What are the requirements to use data generated in other microarray experiments
3.4 years ago by rthapa ▴ 60
0
votes
1
reply
678
views
Haplotypes analysis from SNP chip data
SNP
updated 3.4 years ago by 82k • written 3.4 years ago by ▴ 60
0
votes
0
replies
1.9k
views
Comment: C: r2 and LD value estimation between significant SNPs identified from GWAS
3.4 years ago by rthapa ▴ 60
1
vote
2
replies
1.9k
views
r2 and LD value estimation between significant SNPs identified from GWAS
SNP R
3.4 years ago by rthapa ▴ 60
0
votes
1
reply
541
views
Comparison of samples of different read lengths in differential gene expression analysis
RNA-Seq
updated 3.5 years ago by 12k • written 3.5 years ago by ▴ 60
0
votes
1
reply
1.6k
views
Comment: C: extra gene ids in gene count matrix than in gtf file
3.5 years ago by rthapa ▴ 60
106 results • Page 2 of 3
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