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3.4k
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How to generate OTU table including fasta sequences from QIIME output?
QIIME OTU Table Fasta MiSeq Mothur
updated 6.1 years ago by 3.9k • written 6.1 years ago by ▴ 90
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0
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1.1k
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Comment: C: Sorting taxonomy table
6.6 years ago by arsilan324 ▴ 90
1
vote
2
replies
1.1k
views
Sorting taxonomy table
R next-gen otu_table
6.6 years ago by arsilan324 ▴ 90
1
vote
1
reply
2.3k
views
High Resolution KEGG pathway
RNA-Seq KEGG Images
6.6 years ago by arsilan324 ▴ 90
10
votes
4
replies
2.2k
views
counting number of genes located on positive or negative strands
gff3 htseq
updated 6.9 years ago by ▴ 390 • written 6.9 years ago by ▴ 90
0
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0
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2.2k
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Comment: C: counting number of genes located on positive or negative strands
6.9 years ago by arsilan324 ▴ 90
7
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15
replies
8.4k
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GFF to TBL file conversion for annotation submission
GFF Annotation NCBI Genome
7.6 years ago by arsilan324 ▴ 90
0
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3
replies
2.6k
views
Phyloseq R error: Error in if (xi > xj) 1L else -1L : missing value where TRUE/FALSE needed
phyloseq R 16S amplicon
updated 7.1 years ago by 20 • written 7.2 years ago by ▴ 90
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0
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14k
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Answer: A: How to fix Error in `$<-.data.frame`(`*tmp*`, "Kingdom", value = character(0)) :
7.2 years ago by arsilan324 ▴ 90
0
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3
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14k
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How to fix Error in `$<-.data.frame`(`*tmp*`, "Kingdom", value = character(0)) : replacement has 0 rows, data has 2407
Rank abundance Phyloseq
7.2 years ago by arsilan324 ▴ 90
0
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0
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14k
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Comment: C: How to fix Error in `$<-.data.frame`(`*tmp*`, "Kingdom", value = character(0)) :
7.2 years ago by arsilan324 ▴ 90
7
votes
4
replies
2.3k
views
Is there any quick way to annotate KO terms using a script or tool?
KEGG KO Annotation
updated 7.2 years ago by 166k • written 7.2 years ago by ▴ 90
0
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0
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3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
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1
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3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
13
votes
15
replies
3.6k
views
How to re-order (sort) to get top values for each column in excel sheet of OTUs?
Excel sorting
updated 7.2 years ago by 8.7k • written 7.2 years ago by ▴ 90
0
votes
1
reply
3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
votes
0
replies
3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
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0
replies
3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
votes
2
replies
3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
votes
1
reply
3.6k
views
Comment: C: How to re-order (sort) to get top values for each column in excel sheet of OTUs?
7.2 years ago by arsilan324 ▴ 90
0
votes
1
reply
2.6k
views
Comment: C: Phyloseq R error: Error in if (xi > xj) 1L else -1L : missing value where TRUE/F
7.2 years ago by arsilan324 ▴ 90
0
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1
reply
2.2k
views
Comment: C: How to perform GO annotation? Or assign GO ontology to list of genes?
7.3 years ago by arsilan324 ▴ 90
1
vote
3
replies
2.2k
views
How to perform GO annotation? Or assign GO ontology to list of genes?
GO Annotation WEGO
updated 7.3 years ago by 15k • written 7.3 years ago by ▴ 90
0
votes
1
reply
13k
views
Comment: C: how to extract/grep lines containing specific word?
7.5 years ago by arsilan324 ▴ 90
2
votes
4
replies
13k
views
how to extract/grep lines containing specific word?
grep awk sed
updated 7.5 years ago by 89k • written 7.5 years ago by ▴ 90
0
votes
1
reply
3.0k
views
Comment: C: How to retrieve single protein fasta file for multiple species?
7.6 years ago by arsilan324 ▴ 90
0
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1
reply
3.0k
views
Comment: C: How to retrieve single protein fasta file for multiple species?
7.6 years ago by arsilan324 ▴ 90
0
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1
reply
3.2k
views
Comment: C: Installing the new tool "table2asn_GFF"
7.6 years ago by arsilan324 ▴ 90
1
vote
6
replies
3.2k
views
Installing the new tool "table2asn_GFF"
NCBI Table2asn Installation
7.6 years ago by arsilan324 ▴ 90
0
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1
reply
3.2k
views
Comment: C: Installing the new tool "table2asn_GFF"
7.6 years ago by arsilan324 ▴ 90
4
votes
10
replies
3.0k
views
How to retrieve single protein fasta file for multiple species?
FASTA Protein Multiple_Species Database
updated 7.6 years ago by ★ 2.4k • written 7.6 years ago by ▴ 90
0
votes
1
reply
11k
views
Comment: C: NameError: name 'utils' is not defined
7.6 years ago by arsilan324 ▴ 90
0
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0
replies
11k
views
Comment: C: NameError: name 'utils' is not defined
7.6 years ago by arsilan324 ▴ 90
1
vote
6
replies
11k
views
NameError: name 'utils' is not defined
Python GFF3 NCBI TBL
updated 7.6 years ago by ▴ 230 • written 7.6 years ago by ▴ 90
0
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1
reply
8.4k
views
Comment: C: GFF to TBL file conversion for annotation submission
7.6 years ago by arsilan324 ▴ 90
0
votes
1
reply
3.0k
views
Comment: C: How to retrieve single protein fasta file for multiple species?
7.6 years ago by arsilan324 ▴ 90
0
votes
1
reply
4.8k
views
Comment: A: How to download COMPLETE bacterial genomes from NCBI based on list of names?
7.6 years ago by arsilan324 ▴ 90
0
votes
0
replies
3.0k
views
Comment: C: How to retrieve single protein fasta file for multiple species?
7.6 years ago by arsilan324 ▴ 90
0
votes
1
reply
4.7k
views
Perl error: Can't locate bioUtils.pm in @INC (you may need to install the bioUtils module)
Perl Script
7.6 years ago by arsilan324 ▴ 90
0
votes
2
replies
8.4k
views
Comment: C: GFF to TBL file conversion for annotation submission
7.6 years ago by arsilan324 ▴ 90
1
vote
1
reply
8.4k
views
Comment: C: GFF to TBL file conversion for annotation submission
7.6 years ago by arsilan324 ▴ 90
0
votes
1
reply
8.4k
views
Comment: Comment: GFF to TBL file conversion for annotation submission
7.6 years ago by arsilan324 ▴ 90
1
vote
1
reply
8.4k
views
Comment: C: GFF to TBL file conversion for annotation submission
7.6 years ago by arsilan324 ▴ 90
0
votes
0
replies
1.6k
views
ERROR: SEQ_FEAT.CollidingLocusTags
GFF3 tbl2asn Sequin Annotation
7.6 years ago by arsilan324 ▴ 90
0
votes
0
replies
12k
views
Comment: C: Convert Gff3 (Augustus Output File) To Feature Table File (.Tbl) - Genbank Submi
7.6 years ago by arsilan324 ▴ 90
0
votes
0
replies
2.7k
views
Comment: C: Unable to locate package tcc:i386
7.7 years ago by arsilan324 ▴ 90
0
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1
reply
6.6k
views
Comment: C: DADA2 vs DEBLUR
updated 7.7 years ago by 154k • written 7.7 years ago by ▴ 90
0
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3
replies
6.6k
views
Comment: A: DADA2 vs DEBLUR
7.7 years ago by arsilan324 ▴ 90
0
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1
reply
2.7k
views
Comment: C: Unable to locate package tcc:i386
7.7 years ago by arsilan324 ▴ 90
2
votes
0
replies
6.6k
views
Answer: A: DADA2 vs DEBLUR
7.7 years ago by arsilan324 ▴ 90
58 results • Page 1 of 2
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