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0
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0
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136
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Why ABSOLUTE calculate CCF=NA?
ABSOLUTE
5 months ago by Laven9 • 0
0
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0
replies
1.6k
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Comment: C: Which Driver-Gene Detecting Software Supports hg38?
7 months ago by Laven9 • 0
0
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0
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279
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Comment: C: error when running "SeuratToExpressionSet"
8 months ago by Laven9 • 0
0
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2
replies
279
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error when running "SeuratToExpressionSet"
SeuratToExpressionSet Seurat
8 months ago by Laven9 • 0
0
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1
reply
955
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Comment: C: Set.seed in Seurat
11 months ago by Laven9 • 0
0
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4
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955
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Set.seed in Seurat
Seurat set.seed
updated 11 months ago by ▴ 300 • written 11 months ago by • 0
4
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3
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387
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Strange plots I got from R studio
R
12 months ago by Laven9 • 0
0
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3
replies
1.3k
views
ERROR running annovar with cosmic90
annovar cosmic
updated 24 months ago by ▴ 10 • written 2.0 years ago by • 0
0
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0
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505
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How to interpret ABSOLUTE output?
ABSOLUTE
2.0 years ago by Laven9 • 0
0
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0
replies
1.2k
views
Comment: A: A question on GetPileupSummaries (GATK)
2.1 years ago by Laven9 • 0
0
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2
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1.2k
views
A question on GetPileupSummaries (GATK)
GetPileupSummaries
2.1 years ago by Laven9 • 0
0
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0
replies
1.6k
views
Comment: A: A question on GenomicsDBImport (GATK)
updated 2.1 years ago by 108k • written 2.1 years ago by • 0
0
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4
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1.6k
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A question on GenomicsDBImport (GATK)
GenomicsDBImport
2.1 years ago by Laven9 • 0
0
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0
replies
1.6k
views
Comment: A: A question on GenomicsDBImport (GATK)
2.1 years ago by Laven9 • 0
2
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3
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1.1k
views
Can Mutect2 be used for paper?
gatk Mutect2
updated 2.2 years ago by 9.6k • written 2.2 years ago by • 0
0
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0
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1.1k
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Comment: C: Can Mutect2 be used for paper?
2.2 years ago by Laven9 • 0
0
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0
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420
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Comment: C: What tools could be used for false positive filtering of somatic variants called
2.2 years ago by Laven9 • 0
0
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1
reply
420
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What tools could be used for false positive filtering of somatic variants called? And how do they work?
next-gen
updated 2.2 years ago by 15k • written 2.2 years ago by • 0
0
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0
replies
547
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Comment: C: A small detail when use VEP
2.3 years ago by Laven9 • 0
1
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2
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547
views
A small detail when use VEP
VEP
updated 2.3 years ago by 46k • written 2.3 years ago by • 0
0
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0
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742
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Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
0
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1
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742
views
Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
0
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1
reply
742
views
Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
1
vote
13
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742
views
How long will bam-readcount take to run human samples?
bam-readcounts
updated 2.3 years ago by 55k • written 2.3 years ago by • 0
0
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0
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742
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Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
0
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0
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742
views
Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
0
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1
reply
742
views
Comment: C: How long will bam-readcount take to run human samples?
2.3 years ago by Laven9 • 0
0
votes
1
reply
975
views
How to interpret the output of gatk?
gatk mutect2 vcf2maf
updated 2.3 years ago by ▴ 80 • written 2.4 years ago by • 0
0
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0
replies
375
views
Comment: C: Is there any frequently-used signature database?
2.4 years ago by Laven9 • 0
0
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2
replies
375
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Is there any frequently-used signature database?
signature human cancer
updated 2.4 years ago by 13k • written 2.4 years ago by • 0
0
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1
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1.4k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
2.5 years ago by Laven9 • 0
0
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10
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1.4k
views
CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_mean" with "log2"?
CNV CNVkit Seg_mean
updated 2.5 years ago by ★ 2.7k • written 2.7 years ago by • 0
0
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1
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1.4k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
2.5 years ago by Laven9 • 0
0
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0
replies
395
views
How can I check my title of reads added by BWA mem -R?
WES BWA
2.5 years ago by Laven9 • 0
0
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2
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1.4k
views
Comment: A: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
updated 2.6 years ago by 34k • written 2.7 years ago by • 0
0
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1
reply
754
views
How to skip vep-annotating step for vcf2maf
Vcf2maf
2.6 years ago by Laven9 • 0
0
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0
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1.5k
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Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
0
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0
replies
1.5k
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Comment: A: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
3
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10
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1.5k
views
How can I split WES FASTQ file into sub-files for each chromosome ?
WES split fastq chromosome
2.6 years ago by Laven9 • 0
0
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0
replies
1.5k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
0
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1
reply
1.5k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
0
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0
replies
1.5k
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Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
0
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1
reply
1.5k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
2.6 years ago by Laven9 • 0
0
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0
replies
1.4k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
2.7 years ago by Laven9 • 0
0
votes
2
replies
1.2k
views
How should I input CNV files and mutation files into R to run ABSOLUTE? Respectively or integrated?
ABSOLUTE
updated 2.8 years ago by 77k • written 2.9 years ago by • 0
45 results • Page 1 of 1
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