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0
votes
0
replies
647
views
Why ABSOLUTE calculate CCF=NA?
ABSOLUTE
3.5 years ago by
Laven9
• 0
0
votes
0
replies
4.4k
views
Comment:
C: Which Driver-Gene Detecting Software Supports hg38?
3.7 years ago by
Laven9
• 0
0
votes
0
replies
862
views
Comment:
C: error when running "SeuratToExpressionSet"
3.7 years ago by
Laven9
• 0
0
votes
2
replies
862
views
error when running "SeuratToExpressionSet"
SeuratToExpressionSet
Seurat
3.7 years ago by
Laven9
• 0
0
votes
1
reply
5.0k
views
Comment:
C: Set.seed in Seurat
4.0 years ago by
Laven9
• 0
0
votes
4
replies
5.0k
views
Set.seed in Seurat
Seurat
updated 20 months ago by
Ram
44k • written 4.0 years ago by
Laven9
• 0
4
votes
3
replies
1.0k
views
Strange plots I got from R studio
R
4.1 years ago by
Laven9
• 0
0
votes
3
replies
2.4k
views
ERROR running annovar with cosmic90
annovar cosmic
updated 5.0 years ago by
s.awasthy
▴ 30 • written 5.1 years ago by
Laven9
• 0
0
votes
0
replies
898
views
How to interpret ABSOLUTE output?
ABSOLUTE
5.1 years ago by
Laven9
• 0
0
votes
0
replies
2.4k
views
Comment:
A: A question on GetPileupSummaries (GATK)
5.1 years ago by
Laven9
• 0
0
votes
2
replies
2.4k
views
A question on GetPileupSummaries (GATK)
GetPileupSummaries
5.1 years ago by
Laven9
• 0
0
votes
0
replies
3.5k
views
Comment:
A: A question on GenomicsDBImport (GATK)
updated 5.1 years ago by
GenoMax
147k • written 5.1 years ago by
Laven9
• 0
0
votes
0
replies
3.5k
views
Comment:
A: A question on GenomicsDBImport (GATK)
5.1 years ago by
Laven9
• 0
0
votes
4
replies
3.5k
views
A question on GenomicsDBImport (GATK)
GenomicsDBImport
5.1 years ago by
Laven9
• 0
2
votes
3
replies
2.0k
views
Can Mutect2 be used for paper?
gatk
Mutect2
updated 5.3 years ago by
Nicolas Rosewick
11k • written 5.3 years ago by
Laven9
• 0
0
votes
0
replies
2.0k
views
Comment:
C: Can Mutect2 be used for paper?
5.3 years ago by
Laven9
• 0
0
votes
0
replies
824
views
Comment:
C: What tools could be used for false positive filtering of somatic variants called
5.3 years ago by
Laven9
• 0
0
votes
1
reply
824
views
What tools could be used for false positive filtering of somatic variants called? And how do they work?
next-gen
updated 5.3 years ago by
finswimmer
16k • written 5.3 years ago by
Laven9
• 0
0
votes
0
replies
1.0k
views
Comment:
C: A small detail when use VEP
5.3 years ago by
Laven9
• 0
1
vote
2
replies
1.0k
views
A small detail when use VEP
VEP
updated 5.3 years ago by
WouterDeCoster
47k • written 5.3 years ago by
Laven9
• 0
0
votes
0
replies
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.3 years ago by
Laven9
• 0
0
votes
1
reply
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.3 years ago by
Laven9
• 0
0
votes
1
reply
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.3 years ago by
Laven9
• 0
1
vote
13
replies
2.1k
views
How long will bam-readcount take to run human samples?
bam-readcounts
updated 5.4 years ago by
ATpoint
85k • written 5.4 years ago by
Laven9
• 0
0
votes
0
replies
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.4 years ago by
Laven9
• 0
0
votes
0
replies
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.4 years ago by
Laven9
• 0
0
votes
1
reply
2.1k
views
Comment:
C: How long will bam-readcount take to run human samples?
5.4 years ago by
Laven9
• 0
0
votes
1
reply
1.6k
views
How to interpret the output of gatk?
gatk
mutect2
vcf2maf
updated 5.4 years ago by
zephyr_falcon
▴ 80 • written 5.4 years ago by
Laven9
• 0
0
votes
0
replies
782
views
Comment:
C: Is there any frequently-used signature database?
5.4 years ago by
Laven9
• 0
0
votes
2
replies
782
views
Is there any frequently-used signature database?
signature
human cancer
updated 5.4 years ago by
i.sudbery
20k • written 5.4 years ago by
Laven9
• 0
0
votes
1
reply
3.4k
views
Comment:
C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.6 years ago by
Laven9
• 0
0
votes
10
replies
3.4k
views
CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_mean" with "log2"?
CNV
CNVkit
Seg_mean
updated 5.6 years ago by
Eric T.
★ 2.8k • written 5.8 years ago by
Laven9
• 0
0
votes
1
reply
3.4k
views
Comment:
C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.6 years ago by
Laven9
• 0
0
votes
0
replies
727
views
How can I check my title of reads added by BWA mem -R?
WES
BWA
5.6 years ago by
Laven9
• 0
0
votes
2
replies
3.4k
views
Comment:
A: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
updated 5.6 years ago by
Ram
44k • written 5.8 years ago by
Laven9
• 0
0
votes
1
reply
1.4k
views
How to skip vep-annotating step for vcf2maf
Vcf2maf
5.7 years ago by
Laven9
• 0
0
votes
0
replies
3.6k
views
Comment:
C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
4
votes
10
replies
3.6k
views
How can I split WES FASTQ file into sub-files for each chromosome ?
WES
split
fastq
chromosome
5.7 years ago by
Laven9
• 0
0
votes
0
replies
3.6k
views
Comment:
A: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
0
votes
0
replies
3.6k
views
Comment:
C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
0
votes
1
reply
3.6k
views
Comment:
C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
0
votes
0
replies
3.6k
views
Comment:
C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
0
votes
1
reply
3.6k
views
Comment:
C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.7 years ago by
Laven9
• 0
0
votes
0
replies
3.4k
views
Comment:
C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.8 years ago by
Laven9
• 0
0
votes
2
replies
1.9k
views
How should I input CNV files and mutation files into R to run ABSOLUTE? Respectively or integrated?
ABSOLUTE
updated 5.9 years ago by
Kevin Blighe
88k • written 5.9 years ago by
Laven9
• 0
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