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3
votes
1
reply
3.8k
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How To Interpret The Numbers In The Cnvnator Genotype Output
genotyping
updated 2.3 years ago by • 0 • written 12.8 years ago by ▴ 150
3
votes
4
replies
5.6k
views
How Can I Plot A Region'S Depth As Follow? While Tools Should I Use?
depth-of-coverage plot
updated 5.6 years ago by ▴ 250 • written 12.5 years ago by ▴ 150
10
votes
3
replies
13k
views
How To Calculate A Region‘ Gc Content In Reference Genome？？
gc
updated 3.8 years ago by 45k • written 12.4 years ago by ▴ 150
2
votes
11
replies
13k
views
Tophat Rna-Seq Mapping Quality
tophat rna-seq mapping quality
updated 6.4 years ago by 20 • written 12.4 years ago by ▴ 150
9
votes
6
replies
5.5k
views
How To Compute The Number Of Reads In Bam That Overlap With A Region? The Overlap Must Be 100%.
reads overlap bam
updated 7.1 years ago by 20 • written 12.4 years ago by ▴ 150
35
votes
12
replies
37k
views
8 follow
Forward Strand Or Reverse Strand
read strand
updated 3.2 years ago by 45k • written 12.8 years ago by ▴ 150
0
votes
2
replies
2.0k
views
Perl Script: Use Mpileup'Result To Find A Region'S Deletion
samtools mpileup perl script
updated 10.4 years ago by 20 • written 12.5 years ago by ▴ 150
0
votes
1
reply
3.3k
views
Comment: C: protein domain download
11.1 years ago by siyu ▴ 150
0
votes
3
replies
3.3k
views
protein domain download
gene
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 150
0
votes
0
replies
3.1k
views
Comment: C: pathway analysis tools
11.1 years ago by siyu ▴ 150
0
votes
0
replies
6.1k
views
Answer: A: 1000 Genomes - Sample Subset Of A Vcf File
11.2 years ago by siyu ▴ 150
2
votes
6
replies
3.1k
views
pathway analysis tools
pathway tool
updated 11.2 years ago by 5.1k • written 11.2 years ago by ▴ 150
0
votes
0
replies
3.1k
views
Answer: A: pathway analysis tools
11.2 years ago by siyu ▴ 150
0
votes
1
reply
3.1k
views
Comment: C: pathway analysis tools
11.2 years ago by siyu ▴ 150
0
votes
6
replies
7.0k
views
Cnvnator *** Break *** Segmentation Violation
updated 3.9 years ago by 45k • written 12.8 years ago by ▴ 150
2
votes
2
replies
3.0k
views
Filtering Variants In Rna-Seq Data
rna-seq filtering
updated 11.2 years ago by 20 • written 12.8 years ago by ▴ 150
0
votes
1
reply
3.6k
views
Use The Option -B/--Breakdancer For Pindel
breakdancer pindel
updated 11.8 years ago by 20 • written 12.7 years ago by ▴ 150
3
votes
4
replies
5.2k
views
How To Build A Reference Exome Set When Detecting Cnvs With Exomedepth
updated 2.7 years ago by • 0 • written 12.8 years ago by ▴ 150
0
votes
1
reply
2.9k
views
Getbamcounts In Exomedepth Package
bam exome
updated 12.2 years ago by 20 • written 12.8 years ago by ▴ 150
2
votes
2
replies
2.5k
views
How To Validate A Translocation Has Happened By Computing
updated 12.3 years ago by 56k • written 12.3 years ago by ▴ 150
3
votes
3
replies
2.9k
views
What Is The Meaning Of The Version() Method Of Bio::Ensembl::Exon?
ensembl api exon perl
updated 12.3 years ago by 20k • written 12.8 years ago by ▴ 150
0
votes
1
reply
4.2k
views
Comment: C: How Can I Extract All The Read Pairs In A Region From Bam File ?
12.3 years ago by siyu ▴ 150
3
votes
4
replies
4.2k
views
How Can I Extract All The Read Pairs In A Region From Bam File ?
bam
updated 2.5 years ago by 45k • written 12.3 years ago by ▴ 150
0
votes
0
replies
3.6k
views
Comment: C: How To Find A Read Spanning A Large Deletion In Bam?
12.4 years ago by siyu ▴ 150
1
vote
2
replies
3.6k
views
How To Find A Read Spanning A Large Deletion In Bam?
read bam
updated 12.4 years ago by 12k • written 12.4 years ago by ▴ 150
0
votes
0
replies
13k
views
Comment: C: Tophat Rna-Seq Mapping Quality
12.4 years ago by siyu ▴ 150
1
vote
1
reply
2.8k
views
Samtools View -X Option
samtools
updated 12.4 years ago by 166k • written 12.4 years ago by ▴ 150
0
votes
1
reply
5.5k
views
Comment: C: How To Compute The Number Of Reads In Bam That Overlap With A Region? The Overla
12.4 years ago by siyu ▴ 150
0
votes
0
replies
267k
views
Comment: C: Tools To Calculate Average Coverage For A Bam File?
12.5 years ago by siyu ▴ 150
0
votes
0
replies
2.0k
views
Comment: C: Perl Script: Use Mpileup'Result To Find A Region'S Deletion
12.5 years ago by siyu ▴ 150
0
votes
0
replies
10k
views
Comment: C: Why Are There Ambiguous (N) Bases (Gaps) In The Human Genome
12.5 years ago by siyu ▴ 150
12
votes
5
replies
10k
views
Why Are There Ambiguous (N) Bases (Gaps) In The Human Genome
reference genome
updated 12.5 years ago by 12k • written 12.5 years ago by ▴ 150
1
vote
3
replies
4.1k
views
How To Use The Bioperl To Parse The Flat File Of Uniprotkb Database?
bioperl database
updated 12.7 years ago by ★ 2.4k • written 12.8 years ago by ▴ 150
3
votes
3
replies
6.6k
views
How Can I Get The Location Of Assembly Gaps And Centromere In Hg19 ?
assembly
updated 12.7 years ago by 166k • written 12.7 years ago by ▴ 150
0
votes
1
reply
37k
views
Comment: C: Forward Stand Or Reverse Strand
12.8 years ago by siyu ▴ 150
0
votes
0
replies
7.0k
views
Comment: Comment: Cnvnator *** Break *** Segmentation Violation
updated 3.9 years ago by 45k • written 12.8 years ago by ▴ 150
0
votes
1
reply
7.0k
views
Comment: C: Cnvnator *** Break *** Segmentation Violation
12.8 years ago by siyu ▴ 150
0
votes
1
reply
2.7k
views
Should Masked Or Unmasked Chromosome Sequence Be Given To Cnvnator
cnv
updated 12.8 years ago by 20k • written 12.8 years ago by ▴ 150
0
votes
0
replies
27k
views
Comment: C: Exon Coordinates Of Hg19 Genome Download
12.8 years ago by siyu ▴ 150
1
vote
1
reply
2.9k
views
Comment: C: What Is The Meaning Of The Version() Method Of Bio::Ensembl::Exon?
12.8 years ago by siyu ▴ 150
0
votes
0
replies
5.2k
views
Comment: C: How To Build A Reference Exome Set When Detecting Cnvs With Exomedepth
12.8 years ago by siyu ▴ 150
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