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1
vote
1
reply
730
views
Quast contig values not matching
quast
updated 9 months ago by ▴ 10 • written 10 months ago by ▴ 80
8
votes
6
replies
1.3k
views
Italicise annotations with pheatmap
R Pheatmap
updated 11 months ago by 82k • written 11 months ago by ▴ 80
2
votes
3
replies
623
views
Bedtools sort -faidx producing empty output
bedtools GFF
updated 11 months ago by 43k • written 15 months ago by ▴ 80
0
votes
4
replies
3.1k
views
Maker Failed while doing repeat masking
maker annotation RepBase RepeatMasker
updated 3.0 years ago by 8.6k • written 4.1 years ago by ▴ 80
7
votes
3
replies
931
views
Tools for predicting protein function?
protein
updated 11 months ago by 43k • written 3.0 years ago by ▴ 80
3
votes
2
replies
739
views
Do I need to search for the complementary sequence when using regex?
regex
updated 3.4 years ago by 13k • written 3.4 years ago by ▴ 80
7
votes
7
replies
1.6k
views
Is there a way to produce/convert nhmmer output to a bed file?
bed nhmmer
updated 14 months ago by 43k • written 3.6 years ago by ▴ 80
0
votes
2
replies
1.5k
views
Visualise CD-HIT clusters?
clustering data visualisation CD-HIT
updated 3.6 years ago by 20 • written 3.8 years ago by ▴ 80
3
votes
2
replies
1.0k
views
*** buffer overflow detected ***: blastclust terminated?? Is there another way to create a non-redundant set of proteins?
blastclust non-redundant set sequence protein
3.8 years ago by jamie.pike ▴ 80
8
votes
13
replies
1.9k
views
Python: regular expression searching error
python Regular Expression Error BioPython SeqIO
updated 3.8 years ago by 21k • written 3.8 years ago by ▴ 80
2
votes
3
replies
628
views
Replace matching sections of two fastas
fasta awk
updated 3.8 years ago by 161k • written 3.8 years ago by ▴ 80
3
votes
4
replies
2.1k
views
Samtools faidx not printing reverse complement
samtools faidx samtools reverse complement
3.8 years ago by jamie.pike ▴ 80
5
votes
2
replies
1.9k
views
SignalP is adding the extraneous "bin"
SignalIP path bin install
updated 3.9 years ago by ★ 27k • written 3.9 years ago by ▴ 80
4
votes
5
replies
2.0k
views
Bedtools intersect not reporting all overlaps
BED bedtools intersect GFF Artemis
updated 14 months ago by 43k • written 3.9 years ago by ▴ 80
2
votes
2
replies
1.0k
views
Error setting up BUSCO for loop
BUSCO for loop BASH Syntax error
3.9 years ago by jamie.pike ▴ 80
2
votes
2
replies
1.1k
views
Filtering Augustus GTF based on protein sequence
Augustus GTF Protein sequence Awk
3.9 years ago by jamie.pike ▴ 80
3
votes
2
replies
1.8k
views
Bedtools intersect error in record file
Bedtools intersect
updated 14 months ago by 43k • written 4.0 years ago by ▴ 80
2
votes
4
replies
948
views
MAKER2 no FASTAs generated
MAKER FASTA fasta_merge genome annotation
4.0 years ago by jamie.pike ▴ 80
1
vote
3
replies
1.1k
views
Can BLASTn be used to calculate sequence similarity?
BLASTN Similarity identity
updated 4.0 years ago by 15k • written 4.0 years ago by ▴ 80
0
votes
3
replies
746
views
Methods of annotating a genome?
annotation maker fgenesh genome gene
4.1 years ago by jamie.pike ▴ 80
5
votes
5
replies
1.2k
views
Automate finding locations of BLASTN hits in genome browser?
BLASTN Genome Browser
updated 4.1 years ago by 35k • written 4.1 years ago by ▴ 80
0
votes
0
replies
697
views
Matching Query ID and Subject ID in a new file
BLASTN awk
4.1 years ago by jamie.pike ▴ 80
3
votes
8
replies
1.4k
views
Extracting upstream and downstream bases from a Blastn hit.
blastn extracting bases pcregrep
updated 4.2 years ago by ▴ 200 • written 4.2 years ago by ▴ 80
23 results • Page 1 of 1
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