Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
2.2k
views
  Difference between Cosmic Annotation from VEP and directly from COSMIC VCF.
VEP Annotation
updated 4 months ago by ▴ 40 • written 4.7 years ago by ★ 1.1k
1
vote
3
replies
3.2k
views
  Gvcf Format From Illumina
illumina ngs
updated 4 months ago by 20 • written 7.7 years ago by ★ 1.1k
1
vote
1
reply
339
views
Comment:  C: Method to classify given sample into subtype
8 months ago by always_learning ★ 1.1k
0
votes
1
reply
365
views
Comment:  C: RNA Seq and Somatic Calls for the Cancer data
10 months ago by always_learning ★ 1.1k
0
votes
5
replies
365
views
  RNA Seq and Somatic Calls for the Cancer data
RNA-Seq somatic tumor
updated 10 months ago by 74k • written 10 months ago by ★ 1.1k
0
votes
0
replies
365
views
Comment:  C: RNA Seq and Somatic Calls for the Cancer data
10 months ago by always_learning ★ 1.1k
0
votes
0
replies
4.0k
views
Comment:  C: GISTIC input parameters.
10 months ago by always_learning ★ 1.1k
0
votes
0
replies
494
views
Comment:  C: low genomic inflation factor
11 months ago by always_learning ★ 1.1k
0
votes
1
reply
3.0k
views
Comment:  C: genomic inflation factor calculation
11 months ago by always_learning ★ 1.1k
0
votes
1
reply
437
views
  GENE BURDEN TEST
EXOME GENE BURDEN
11 months ago by always_learning ★ 1.1k
1
vote
0
replies
36k
views
Answer:  A: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 12 months ago by 34k • written 5.8 years ago by ★ 1.1k
0
votes
1
reply
1.2k
views
Comment:  C: How to annotate structural variants in VCF with esv/nsv identifiers
16 months ago by always_learning ★ 1.1k
0
votes
0
replies
1.2k
views
Comment:  C: How to annotate structural variants in VCF with esv/nsv identifiers
16 months ago by always_learning ★ 1.1k
0
votes
1
reply
1.2k
views
Answer:  A: How to annotate structural variants in VCF with esv/nsv identifiers
16 months ago by always_learning ★ 1.1k
1
vote
0
replies
2.2k
views
Comment:  C: Can Homozygous Snps Be Used To Construct A Phylogeny?
updated 18 months ago by 34k • written 7.6 years ago by ★ 1.1k
0
votes
0
replies
1.5k
views
Answer:  A: TCGA database search
updated 18 months ago by 34k • written 5.5 years ago by ★ 1.1k
0
votes
1
reply
5.0k
views
Comment:  C: GenomeStudio genotype format to VCF?
updated 18 months ago by 34k • written 5.6 years ago by ★ 1.1k
4
votes
2
replies
4.8k
views
Answer:  A: extracting heterozygous snp from a vcf file
updated 18 months ago by 34k • written 5.6 years ago by ★ 1.1k
0
votes
0
replies
3.5k
views
Comment:  C: PLINK .bim file shows chromosome 0 on Affymetrix chip
updated 18 months ago by 34k • written 5.6 years ago by ★ 1.1k
0
votes
1
reply
25k
views
Comment:  A: Sift Or Polyphen
19 months ago by always_learning ★ 1.1k
0
votes
1
reply
25k
views
Comment:  A: Sift Or Polyphen
19 months ago by always_learning ★ 1.1k
0
votes
1
reply
2.8k
views
Comment:  C: Somatic indel calling with Pindel
19 months ago by always_learning ★ 1.1k
0
votes
0
replies
1.1k
views
Comment:  C: How to convert maf file format to oncoPrint matrix (ComplexHeatmap package)?
20 months ago by always_learning ★ 1.1k
0
votes
0
replies
1.5k
views
Comment:  C: TCGA TMB: What exome size to use?
21 months ago by always_learning ★ 1.1k
0
votes
1
reply
12k
views
Comment:  C: How To Split A .Vcf.Gz File
updated 21 months ago by 34k • written 6.8 years ago by ★ 1.1k
0
votes
0
replies
6.5k
views
Comment:  C: MeDip-seq data interpretation + analysis / MEDIPS, MACS2
23 months ago by always_learning ★ 1.1k
0
votes
1
reply
2.5k
views
  Can Some One Explain These Gatk Unifiedgenotyper Commands And Difference In Terms Of Output Also
gatk variant ngs
updated 2.2 years ago by 20 • written 7.8 years ago by ★ 1.1k
0
votes
0
replies
4.6k
views
Comment:  C: Using parallel with Mem
updated 2.3 years ago by 74k • written 7.2 years ago by ★ 1.1k
0
votes
1
reply
8.7k
views
Comment:  C: Best tool for variant calling
2.3 years ago by always_learning ★ 1.1k
2
votes
6
replies
970
views
  VCFParseError: ploidy > 2 not supported
VCF GATK PLOIDY
updated 2.3 years ago by ▴ 50 • written 2.5 years ago by ★ 1.1k
0
votes
1
reply
8.7k
views
Comment:  C: Best tool for variant calling
2.3 years ago by always_learning ★ 1.1k
0
votes
0
replies
7.7k
views
Comment:  C: Installing Bwa On 32 Bit Unix Machine
updated 2.4 years ago by 34k • written 7.8 years ago by ★ 1.1k
0
votes
1
reply
7.7k
views
Comment:  C: Installing Bwa On 32 Bit Unix Machine
updated 2.4 years ago by 34k • written 7.8 years ago by ★ 1.1k
0
votes
0
replies
3.9k
views
Comment:  C: Illumina Read Quality
updated 2.4 years ago by 34k • written 7.8 years ago by ★ 1.1k
0
votes
1
reply
970
views
Comment:  C: VCFParseError: ploidy > 2 not supported
2.5 years ago by always_learning ★ 1.1k
0
votes
1
reply
970
views
Comment:  C: VCFParseError: ploidy > 2 not supported
2.5 years ago by always_learning ★ 1.1k
16
votes
12
replies
6.7k
views
7 follow
  Annotation for SV and CNV
Annotation CNV SV
updated 2.7 years ago by 45k • written 5.0 years ago by ★ 1.1k
0
votes
0
replies
635
views
Comment:  C: AF comparison between two population.
2.8 years ago by always_learning ★ 1.1k
0
votes
0
replies
635
views
Comment:  C: AF comparison between two population.
2.8 years ago by always_learning ★ 1.1k
0
votes
0
replies
635
views
Comment:  C: AF comparison between two population.
2.8 years ago by always_learning ★ 1.1k
0
votes
1
reply
635
views
Comment:  C: AF comparison between two population.
2.8 years ago by always_learning ★ 1.1k
1
vote
7
replies
635
views
  AF comparison between two population.
R Statistical test AF
2.8 years ago by always_learning ★ 1.1k
0
votes
1
reply
3.2k
views
Comment:  A: VCF file period symbol in the genotype
2.8 years ago by always_learning ★ 1.1k
0
votes
1
reply
1.9k
views
Comment:  C: Subset VCF file by comparing CHROM,POS,REF and ALT
2.8 years ago by always_learning ★ 1.1k
0
votes
1
reply
1.9k
views
Comment:  C: Subset VCF file by comparing CHROM,POS,REF and ALT
updated 2.8 years ago by 34k • written 2.8 years ago by ★ 1.1k
0
votes
0
replies
1.8k
views
Answer:  A: Looking for walkthrough guide on Rare Variant Association Analysis
2.9 years ago by always_learning ★ 1.1k
0
votes
1
reply
16k
views
Comment:  C: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
2.9 years ago by always_learning ★ 1.1k
3
votes
4
replies
1.9k
views
  Extracting upstream and Downstream of a Gene based on different intervals
intervals upstream
updated 3.1 years ago by ★ 2.1k • written 3.1 years ago by ★ 1.1k
0
votes
0
replies
1.9k
views
Comment:  C: Extracting upstream and Downstream of a Gene based on different intervals
3.1 years ago by always_learning ★ 1.1k
2
votes
16
replies
2.1k
views
  Pysam fetch for records not exists in VCF files
pysam fetch
updated 3.1 years ago by ▴ 170 • written 4.7 years ago by ★ 1.1k
272 results • Page 1 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6