Limit : this month
all time today this week this month this year
11 results • Page 1 of 1
Sort: Rank
Rank Views Votes Replies
0
votes
1
reply
127
views
Job: Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes DevOps executor AWS Snakemake
updated 16 hours ago by 54k • written 17 hours ago by ▴ 100
0
votes
0
replies
123
views
Job: Ensembl Outreach Project Leader
ebi embl genomics ensembl
1 day ago by Ben_Ensembl ★ 2.4k
0
votes
0
replies
147
views
Job: Bioinformatics PhD position in Aarhus, Denmark
PhD Genomics Cancer
updated 6 days ago by 43k • written 8 days ago by • 0
0
votes
0
replies
218
views
Job: PhD in bioinformatics / computational biology
NGS Omics Evolution Aging
9 days ago by Arne.Sahm • 0
0
votes
1
reply
2.4k
views
Job: Full Stack Web Developer - Cambridge, UK
JavaScript Python Visualisation
written 8.4 years ago by ▴ 400
1
vote
1
reply
570
views
Job: Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
12 days ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
153
views
Job: Job Opening - Fred Hutch - Director of Training & Community
fred-hutchinson
updated 22 days ago by 43k • written 23 days ago by ▴ 20
0
votes
0
replies
198
views
Job: Post-doctoral positions in computational biomedicine
data-science biomedicine machine-learning
updated 23 days ago by 43k • written 23 days ago by ▴ 200
0
votes
0
replies
230
views
Job: Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science genomics postdoc
updated 12 days ago by 43k • written 5 weeks ago by • 0
1
vote
2
replies
519
views
Job: Junior Research Software Engineer/ Research Software Engineer - web resources for virology
software developer web virology
28 days ago by Joseph Hughes ★ 3.0k
0
votes
0
replies
1.9k
views
Job: Bioinformatics Research Postdoc
RNA-Seq genome
updated 6 days ago by 43k • written 8.2 years ago by • 0
11 results • Page 1 of 1
Recent Votes
High fold change values
C: Bcftools Mpileup Removes Marked Duplicates?
Prediction tools summary - zero values
A: Error with Formatdb of legacy blast?
Error with Formatdb of legacy blast?
Answer: How to convert SAM/BAM file to GTF/GFF file?
A: Ribo-seq vs RNA-seq read count
Recent Locations • All
Brazil, 1 minute ago
Taiwan, 3 minutes ago
Brazil/Recife, 4 minutes ago
United States, 8 minutes ago
Australia, 9 minutes ago
United States, 11 minutes ago
United States, 23 minutes ago
Recent Awards • All
Popular Question to Yingying • 0
Popular Question to anasjamshed ▴ 120
Popular Question to synat.keam ▴ 100
Popular Question to Rui ▴ 50
Popular Question to otieno43 ▴ 20
Scholar to bk11 ★ 2.3k
Popular Question to jammydodger123456 ▴ 40
Recent Replies
Comment: Removing duplicates by samuel.a.odonnell ▴ 510
As above, you do not need to worry about duplicates for ONT data Also have you looked at using other tools for variant calling more suited…
Answer: Pediococcus acidilactici sequence analysis by geneontologyhelp ▴ 340
If you're looking for the GO annotations for *Pediococcus acidilactici*, these are available. Using the instructions under [*2. All other…
Answer: What is the normalization status of metabric data? by etiennedanis ▴ 10
I just found an answer to this question here: [https://groups.google.com/g/cbioportal/c/hm_i4jbG1uc/m/h9rNYOvpAAAJ][1] [1]: https://gro…
Comment: Removing duplicates by joe ▴ 490
With ONT you will only have PCR duplicates. 'Read' (you mean optical?) duplicates are an artifact of cluster-based sequencing (ie Illumina)…
Comment: assembly using CCS, CLR, CCS_CLR sequences together? by GenoMax 141k
PacBio has some recommendations on software for genome assemblies on this page (which you may have seen but just in case): https://www.pacb…
Answer: DEG analysis of RNA-seq data across multiple tissues and two conditions by swbarnes2 14k
I would not put totally different tissues in the same DESeq object. I don't think that's going to do good things for normalization or disp…
Comment: Removing duplicates by quentinperriere • 0
pcr duplicates or/and read duplicates should I use this command to remove them ? or we don't talk about duplicates when dealing with ONT ??…
Comment: How to reduce the variation of CIBERSORTx results? by LChart 3.9k
If you didn't change the input signature matrix, the input RNA matrix, or the input parameters - what did you change? Is the statement that…
Answer: Inconsistency in SNP detection pipelines for multi-sample analysis by LChart 3.9k
> To replicate GVCF behavior and avoid issues with 0/0 genotypes appearing as missing, I don't use the -v option I'm not sure what you m…
Comment: Supergnova stuck in tutorial by GenoMax 141k
Your best option may be to email the author (and/or the senior author from the paper). Let them know that the FTP links mentioned on GitHub…
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions by BioinfGuru ★ 1.7k
Thanks @lchart, I accept that, I'll wait to see if there's any more who want to input and then accept the answer
Comment: Per base sequence content failed miserably by GenoMax 141k
What kind of data is this? Plain genomic/amplicons? How you proceed will largely depend on the context. Can you also post the original fast…
Comment: Removing duplicates by samuel.a.odonnell ▴ 510
I guess the enlightening question is: duplicates of what?
Answer: DEG analysis of RNA-seq data across multiple tissues and two conditions by LChart 3.9k
I don't think this approach will give you what you want. Combining multiple tissues in the way you are suggesting will result in a positive…
Comment: Supergnova stuck in tutorial by Murat • 0
Hi Gerard, I am also using the tutorial and found your answer. The ftp links are not working any longer; is there any other source to downl…
Traffic: 1713 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6