2
votes
12
replies
501
views
1
vote
5
replies
2.2k
views
0
votes
4
replies
1.4k
views
updated 17 hours ago by
mrmodenait
•
0
•
written 19 months ago by
DN99
▴
20
0
votes
4
replies
1.1k
views
0
votes
3
replies
547
views
updated 12 hours ago by
Ram
38k
•
written 2.7 years ago by
karthick.n
▴
10
0
votes
3
replies
4.1k
views
0
votes
3
replies
823
views
1
vote
3
replies
906
views
0
votes
2
replies
699
views
updated 12 hours ago by
Ram
38k
•
written 2.5 years ago by
guillepalou4
▴
20
1
vote
2
replies
201
views
0
votes
2
replies
115
views
1
vote
2
replies
211
views
1
vote
2
replies
4.3k
views
updated 11 hours ago by
Ram
38k
•
written 9.2 years ago by
alielbehery
▴
10
0
votes
2
replies
1.1k
views
updated 11 hours ago by
Ram
38k
•
written 2.8 years ago by
nvijay1991
•
0
0
votes
2
replies
118
views
0
votes
2
replies
131
views
10 hours ago by
ugur
•
0
0
votes
1
reply
15
views
updated 51 minutes ago by
Pierre Lindenbaum
153k
•
written 1 hour ago by
fatemeh
•
0
0
votes
1
reply
80
views
0
votes
1
reply
146
views
updated 16 hours ago by
jv
★
1.0k
•
written 22 hours ago by
Omics data mining
▴
210
0
votes
1
reply
782
views
0
votes
1
reply
613
views
1
vote
1
reply
730
views
1
vote
1
reply
1.8k
views
updated 11 hours ago by
Ram
38k
•
written 3.7 years ago by
Shicheng Guo
★
9.3k
1
vote
1
reply
4.0k
views
updated 11 hours ago by
Ram
38k
•
written 4.4 years ago by
daniellemo
▴
10
0
votes
1
reply
1.4k
views
updated 11 hours ago by
Ram
38k
•
written 4.4 years ago by
Shicheng Guo
★
9.3k
0
votes
1
reply
928
views
updated 11 hours ago by
Ram
38k
•
written 4.7 years ago by
cristygonzalezlopez
•
0
1
vote
1
reply
1.5k
views
updated 11 hours ago by
Ram
38k
•
written 6.8 years ago by
lakhujanivijay
5.7k
0
votes
0
replies
563
views
updated 11 hours ago by
Ram
38k
•
written 2.8 years ago by
sviatoslav.kendall
▴
880
0
votes
0
replies
64
views
17 hours ago by
farzaneafzali
▴
70
0
votes
0
replies
141
views
0
votes
0
replies
1.4k
views
updated 11 hours ago by
Ram
38k
•
written 5.5 years ago by
alexandre.stil
•
0
0
votes
0
replies
2.0k
views
0
votes
0
replies
1.3k
views
0
votes
0
replies
56
views
18 hours ago by
parrasevilla.bioinfo
•
0
0
votes
0
replies
97
views
0
votes
0
replies
59
views
0
votes
0
replies
952
views
0
votes
0
replies
1.5k
views
updated 11 hours ago by
Ram
38k
•
written 4.4 years ago by
djeppschmidt
•
0
1
vote
0
replies
57
views
16 hours ago by
barrypraveen
▴
110
0
votes
0
replies
64
views
updated 17 hours ago by
Pierre Lindenbaum
153k
•
written 18 hours ago by
shreshta2396
•
0
Recent Votes
Recent Locations •
All
Hong Kong, 1 minute ago
Japan, 2 minutes ago
Germany, 5 minutes ago
Poland, 6 minutes ago
India, 10 minutes ago
India, 11 minutes ago
India, 11 minutes ago
Recent Awards •
All
Popular Question to
bitpir
▴
210
Popular Question to
randalljellis
▴
90
Popular Question to
RvV
▴
10
Popular Question to
farzaneafzali
▴
70
Scholar to
MirianT_NCBI
▴
460
Popular Question to
Ap1438
▴
50
Recent Replies
Answer: Problem running interproscan-5.15-54.0 for protein sequences
by
Pratyay
•
0
Hi, can you guide me how to compile the src folder?
Many thanks!
Comment: Matching gene-expression data with clinical data: best practices.
by
krushnach80
★
1.1k
You can check [this][1]
[1]: https://www.linkedomics.org/
Answer: Matching gene-expression data with clinical data: best practices.
by
jose.sgomez94
•
0
Figured out one can use the TCGAutils package in R and UUIDtobarcode() function. Still, suggestions of best practices would be awesome!
Answer: Understanding multifactor designs and control variables in DESeq2
by
FrankStarling
▴
50
https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2021/RNAseq/Markdowns/10_DE_analysis_with_DESeq2.Solutions.html
…
Answer: Is it possible to do DGE analysis using log 2 normalized data with EdgeR ?
by
Adaline.D
•
0
I appreciate your help, LChart! I will use raw data in case of a substantial loss of power.
(1) The publication did a PCA and then analy…
Answer: Is it possible to do DGE analysis using log 2 normalized data with EdgeR ?
by
LChart
2.2k
Short answer: use LIMMA
Long answer: edgeR uses a negative binomial model, and expects *counts* and not *values*. Please read section 2.8.…
Comment: Python formatting when visualizing Primer3-py dimers
by
bhumm
▴
30
Wayne, both of these methods work beautifully. I really appreciate the detail you provided, thank you so much for your help!
Comment: Ortholog assembly and extraction
by
dthorbur
▴
420
I really like `orthofinder` and use it frequently, but there are also plenty of other tools out there. [Here](https://academic.oup.com/mbe/…
Answer: Cellranger sequencing
by
ATpoint
70k
Not that I am aware of. Unlike methods such as salmon it does genome alignment and does not resolve the exact transcript expression composi…
Answer: Assembly at lineage level from shotgun data ?
by
Mensur Dlakic
★
23k
The paper I list below is meant for improving the existing MAG assemblies. Yet the program will do what you want: if you give it a referenc…
Comment: Ortholog assembly and extraction
by
GenoMax
127k
Many seem to use `orthofinder` for this purpose. See if it is useful: https://github.com/davidemms/OrthoFinder
Answer: Python formatting when visualizing Primer3-py dimers
by
Wayne
★
1.7k
Try this so you'll see that using [tabulate](https://github.com/astanin/python-tabulate) to print the dataframe causes it to respect the li…
Comment: Python formatting when visualizing Primer3-py dimers
by
bhumm
▴
30
Glad I am making this more clear. The 'test1' in practice will be the 'primer name' to allow for tracking of other metrics (Tm, hairpin str…
Traffic: 913 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6