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7 results • Page
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Tutorial:
removeBatchEffect explained using base R linear models
limma
effects
batch
removebatcheffects
updated 8 days ago by
dariober
14k • written 8 days ago by
nhaus
▴ 360
5
votes
5
replies
656
views
Tutorial:
how to combine multiple RNAseq count files into a single dataframe in R and unix
Unix
RNAseq
R
updated 12 days ago by
Mbofire
• 0 • written 20 days ago by
Ming Tommy Tang
★ 3.9k
76
votes
72
replies
20k
views
19 follow
Tutorial:
Clustering of DAVID gene enrichment results from gene expression studies
enrichment
david
20 days ago by
Kevin Blighe
88k
5
votes
13
replies
1.9k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
R
Ubuntu
Linux
Bioconductor
Rstudio
updated 25 days ago by
ATpoint
82k • written 26 days ago by
BioinfGuru
★ 1.7k
7
votes
3
replies
3.0k
views
Tutorial:
Prediction of Ribosomal RNA Genes Using RNAmmer Software
Annotation
rRNA
RNAmmer
Genome
updated 26 days ago by
colindaven
6.4k • written 16 months ago by
Dr.Animo
▴ 130
1
vote
0
replies
219
views
Tutorial:
DNA Methylation: Sequencing Techniques
WGBS
RRBS
27 days ago by
Novogene
▴ 420
87
votes
24
replies
23k
views
17 follow
Tutorial:
Gene Set Enrichment Analysis
microarray
enrichment
RNA-Seq
GSEA
updated 27 days ago by
Gordon
• 0 • written 3.6 years ago by
Hamid Ghaedi
3.2k
7 results • Page
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Recent Replies
Comment: bbmerge (bbmap) ~ error with insert size file output
by
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Ah, this is a little embarrassing; those are the vectors for the neural network. I overloaded a field that was being used for the insert s…
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Comment: Filtering VCF files based on VAF giving incorrect results
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These are valid questions. Does your code address the concerns you've raised? From what I understand, FilterVcf is primarily designed for h…
Answer: Calculate allelic frequency from VEP output vcf file
by
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Found the answer here!! https://github.com/Illumina/strelka/blob/master/docs/userGuide/README.md#somatic Although this leads to a str…
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That's not a valid reason to delete the post. If that information was sensitive, posting it here was a mistake in the first place. I don't …
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Hi, regardless of how you generated the data whether with DESeq2 or other pipeline, your differential expression matrix can be used as inpu…
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Thank you very much, you've helped me a lot. Could you suggest a book or article that offers a complete explanation of these processes?
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Thank you. I can't try a completely new tool but I will keep your command for future use. Do you think my commands were correct? For exampl…
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Ghada
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Thanks. Thats work
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Whether N -> A/T/G/C represents a variant is heavily dependent on the tool itself, and I know most tools don't. Since you don't see it in y…
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marco.barr
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The code seems correct at first glance... How did you generate the data in the Excel file? Have you checked the exon annotations? You could…
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GenoMax
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Did you remeber to unzip/untar the `nt` preformatted files that you downloaded?
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