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News: LAST CALL: Two days left to register for our workshop 'RNA-seq Bioinformatics: A Practical Introduction'
RNA-Seq workshop
updated 13 days ago by 38k • written 8.7 years ago by 9.9k
2
votes
0
replies
3.1k
views
News: Promoter Design Challenge: Design A Plant Promoter And We Will Construct It.
plant-promoter transcription-factor
updated 24 days ago by 38k • written 10.1 years ago by ▴ 20
1
vote
0
replies
2.5k
views
News: Bioconductor/R Workshop For High-Throughput Data Analysis (Web Version)
microarray bioconductor online next-gen
updated 19 days ago by 38k • written 9.5 years ago by ▴ 10
1
vote
0
replies
930
views
News: National Advisory Council for Human Genome Research, 71st meeting--live Monday morning
nhgri
updated 13 days ago by 38k • written 8.8 years ago by 11k
1
vote
0
replies
1.3k
views
News: What is new in Ensembl: Free webinar
Ensembl genome-browser
updated 10 days ago by 38k • written 8.4 years ago by ★ 5.2k
1
vote
0
replies
148
views
News: Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements TE Genome-Assembly
updated 3 days ago by 38k • written 7 days ago by ★ 2.3k
1
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0
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1.2k
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News: Day 1 Highlights of SFAF 2014 Meeting
Sequencing
updated 13 days ago by 38k • written 8.8 years ago by ▴ 640
1
vote
0
replies
188
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News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
updated 20 days ago by 38k • written 20 days ago by ▴ 730
1
vote
1
reply
1.6k
views
News: Igb Service Interruption - Backup Site Address
genome-browser RNA-seq
updated 18 days ago by 38k • written 9.4 years ago by ★ 2.3k
1
vote
1
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1.8k
views
News: 'Spring School 2013 - Epigenetics Of Civilization Diseases', May 27Th - 31St 2013, In Leipzig, Germany
epigenetics
updated 24 days ago by 38k • written 10.3 years ago by 9.9k
1
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0
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2.2k
views
News: APPLICATION DEADLINE IS DECEMBER 5 for Penn State Applied Bioinformatics Program – 100% Online
education courses online
updated 10 days ago by 38k • written 8.3 years ago by ▴ 10
1
vote
0
replies
187
views
News: Advanced Bayesian statistics in R course
Statistics RegressionModeling Bayesian R
17 days ago by carlopecoraro2 ★ 2.3k
1
vote
1
reply
1.6k
views
News: Article: Crowdfunding Genomics And Bioinformatics
crowdfunding
updated 18 days ago by 38k • written 9.4 years ago by 8.2k
1
vote
0
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127
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News: Summer School in Bioinformatics
Genomics Docker RNA-seq
updated 3 days ago by 38k • written 3 days ago by ★ 2.3k
1
vote
1
reply
225
views
News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
5 days ago by jared.andrews07 ★ 14k
1
vote
1
reply
1.7k
views
News: 2013 Gmod Summer School - Now Accepting Applications!
galaxy
updated 23 days ago by 38k • written 9.9 years ago by ▴ 280
1
vote
0
replies
178
views
News: Virtual Single Cell RNA-seq Workshop
single genomics cell expression rna-seq workshop gene
16 days ago by mia.nahom ▴ 10
1
vote
0
replies
1.7k
views
News: Gatk Workshop Oct 21-22 To Coincide With Ashg Conference
conference gatk
updated 20 days ago by 38k • written 9.6 years ago by ★ 1.2k
1
vote
1
reply
464
views
News: QC for Next Generation Sequencing
NGS QC
updated 10 days ago by 38k • written 17 months ago by • 0
1
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0
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4.0k
views
News: Hands-On Training in RNA-seq Bioinformatics: A Practical Introduction - Mapping, Visualization, Basic Analyses
next-gen RNA-Seq workshop
updated 13 days ago by 38k • written 8.8 years ago by 9.9k
1
vote
0
replies
1.2k
views
News: Galaxy Group At G+
galaxy
updated 23 days ago by 38k • written 9.8 years ago by ★ 1.3k
1
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0
replies
1.6k
views
News: Gatk Workshop Survey
gatk
updated 27 days ago by 38k • written 10.8 years ago by ★ 1.2k
0
votes
0
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548
views
News: FINAL CALL :: Online Course - A Practical Introduction to NGS Data Analysis (July 14-16, 2021)
NGS workshop
updated 2 days ago by 38k • written 21 months ago by 9.9k
0
votes
0
replies
2.3k
views
News: Total RNA Commercial Kit Comparison Study
microarray NGS RNA-Seq qPCR
updated 10 days ago by 38k • written 8.3 years ago by ▴ 40
0
votes
0
replies
666
views
News: Managing single cell transcriptomics: Course at EMBL-EBI, July 3-5
single-cell RNA-Seq
updated 5 days ago by 38k • written 3.9 years ago by • 0
0
votes
0
replies
198
views
News: Introduction to GWAS course in June
GWAS R
updated 12 days ago by 38k • written 5 weeks ago by ★ 2.3k
0
votes
0
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129
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News: Course - GENERALIZED LINEAR MODELS in R
GLMs R GeneralisedLinearModels
12 days ago by carlopecoraro2 ★ 2.3k
0
votes
0
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107
views
News: Environmental Metagenomics course
Environmental-Metagenomics
updated 11 days ago by 38k • written 11 days ago by ★ 2.3k
0
votes
0
replies
263
views
News: Course - Analysis of PROKARYOTIC PANGENOMES
Genomics Pangenomes
updated 27 days ago by 38k • written 29 days ago by ★ 2.3k
0
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0
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1.8k
views
News: Dublin - Software Carpentry In The Cloud Bootcamp
python cloud
updated 26 days ago by 38k • written 10.6 years ago by 2.3k
0
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0
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4.6k
views
News: Bioinformatics Training Courses - Metagenomics and NGS data analysis - Sydney and Canberra, Australia
metagenomics training next-gen-sequencing
updated 13 days ago by 38k • written 8.8 years ago by 49k
0
votes
0
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149
views
News: course - single-cell RNAseq with R/Bioconductor
Bioconductor single-cell genomics RNAseq
updated 12 days ago by 38k • written 25 days ago by ★ 2.3k
0
votes
0
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1.7k
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News: Workshop: Programming For Evolutionary Biology (March 21St – April 6Th 2014)
ngs
updated 18 days ago by 38k • written 9.3 years ago by 9.9k
0
votes
0
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1.6k
views
News: Project Management Tools for Bioinformaticians and Service Providers
Quotation-software LIMS Project-management
updated 6 days ago by 38k • written 8.3 years ago by ▴ 640
0
votes
2
replies
267
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 2 days ago by 38k • written 2 days ago by ★ 2.3k
0
votes
0
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444
views
News: Live webinar (Feb 12 at 12PM Eastern): variant calling for bench scientists
variant-calling wgs wes
updated 5 days ago by 38k • written 3.1 years ago by • 0
0
votes
2
replies
1.4k
views
News: M.Phil Program in Bioinformatics
education career
updated 2 days ago by 38k • written 7.4 years ago by • 0
0
votes
9
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1.9k
views
News: Practical Genomics: From Biology to Biostatistics Workshop (Baltimore, MD)
workshop
updated 13 days ago by 38k • written 8.7 years ago by 10k
0
votes
0
replies
2.1k
views
News: Second Annual International Environmental Omics conference to be held in Liverpool, UK. September 15th-18th
Conference
updated 13 days ago by 38k • written 8.7 years ago by ★ 3.9k
0
votes
0
replies
3.0k
views
News: sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments
webserver isomiRs microRNA small-RNA
updated 10 days ago by 38k • written 8.4 years ago by 9.9k
0
votes
5
replies
1.8k
views
News: Ashg 2012 Biostar Meetup
ASHG
updated 24 days ago by 38k • written 10.4 years ago by 12k
0
votes
2
replies
1.9k
views
News: Seqnews.Net: Discover And Share News On Next-Generation Sequencing
next-gen-sequencing
updated 24 days ago by 38k • written 10.3 years ago by 9.9k
0
votes
0
replies
3.5k
views
News: Journal Of Bioinformatics Research Studies- Call For Papers
publication biology
updated 13 days ago by 38k • written 9.0 years ago by • 0
0
votes
0
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2.7k
views
News: LAST CALL: Hands-On NGS Data Analysis Workshops 2014
NGS microRNA workshop RNA-Seq
updated 13 days ago by 38k • written 8.7 years ago by 9.9k
0
votes
0
replies
115
views
News: Course - INTRODUCTION TO THE ANALYSIS OF LONGITUDINAL DATA WITH R
Genomics LongitudinalData R
19 days ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
188
views
News: course MULTIVARIATE DATA ANALYSIS WITH R AND VEGAN
Vegan MULTIVARIATEDATAANALYSIS Statistics R
23 days ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
2.1k
views
News: Conference Announcement - Camda 2014
conference
updated 16 days ago by 38k • written 9.0 years ago by ▴ 240
0
votes
0
replies
1.3k
views
News: Free Ensembl webinar
Ensembl
updated 10 days ago by 38k • written 8.4 years ago by 23k
0
votes
0
replies
2.5k
views
News: Call-for-Papers in Epigenomics (BMRI, impact factor 2.7)
epigenomics papers
updated 10 days ago by 38k • written 8.4 years ago by • 0
0
votes
0
replies
801
views
News: Training in genomics workflows for computational novices
bash training workshop cloud
updated 5 days ago by 38k • written 3.8 years ago by • 0
152 results • Page 3 of 4
Recent Votes
C: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil
unplaced, unlocalized, ... scaffolds from hg19 to GRCh38
C: extracting heterozygous snp from a vcf file
Comment: March 13-16: Virtual Nextflow and nf-core training event in 5 languages
Answer: Where do find virulence gene information in a gff/gtf file?
Comment: split fasta file to train deep learning model
Criteria for filtering contigs after spades assembly
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Recent Replies
Comment: samtools idxstats not removing ChrM by Jeremy Leipzig 21k
can we see the output from this? `samtools idxstats chipseq/results/bowtie2/PPARg/PPARg_Input_Rep1_aln_sorted.bam` conversely just as an e…
Comment: Nextflow Stringtie: command not found Error by ATpoint 70k
It's bad practice to delete posts that received an answer ( = a user invested time - in this case me but it of course applies generally). D…
Comment: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil by EkHe • 0
Hi @juke34, if you're able, can you please clarify something for me (based on the answer you've given here)? Thanks a lot in advance. I als…
Answer: Practical Haplotype Graph -- Pathing Error by lcj34 ▴ 220
FYI - The latest PHG docker version (tag 1.4) has a fix for this issue.
Comment: Nextflow: No space left on device, process using output directory as input? by Maxime Garcia ▴ 220
Nextflow should only link inputs (unless stated otherwise), so even if you use outdir as input it should not be much of an issue, but still…
Comment: Problem in converting SAM to BAM file by DROP SEQ by lieven.sterck 14k
Hi https://www.biostars.org/u/126271/, welcome. it might be good to add some more info on your "question". Now it only shows an error mes…
Comment: Trying to install Roary with Conda results in error message by tobiwan • 0
Thank you for your answer I'm using Ubuntu 22.04.2 LTS, command line used: conda install roary. Or do you need a screenshot of the whole …
Comment: Nextflow: No space left on device, process using output directory as input? by colindaven 4.5k
Yes, don't use the outdir as an input. You might get infinite loops.
Comment: UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid by wangjincheng • 0
I tried unzipped file, it shows the same error
Comment: UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid by Pierre Lindenbaum 153k
> use python package to load and analysis vcf.gz files looks like it doesn't like gzipped file. Are you sure this software can read gzip…
Comment: Trying to install Roary with Conda results in error message by ATpoint 70k
This cannot be answered. Add your command line and operating system.
Comment: split fasta file to train deep learning model by shenwei356 7.9k
shuffle the sequences, with a rand seed 1. seqkit shuffle --two-pass --rand-seed 1 hairpin.fa -o hairpin.s1.fa testing data …
Comment: split fasta file to train deep learning model by pinheirofabiano ▴ 10
I'm trying to split my file in two, using Seqkit, but it is not working.. using the command sample, I can generate a file that contains 80%…
Comment: split fasta file to train deep learning model by pinheirofabiano ▴ 10
thank you very much for your comment, @Mensur My file is just a list of peptides, not a complete genome
Comment: March 13-16: Virtual Nextflow and nf-core training event in 5 languages by Maxime Garcia ▴ 220
All the videos are now online and organized in 5 different playlists on the nf-core youtube channel: https://www.youtube.com/@nf-core/playl…
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