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questions
0
votes
2
replies
273
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WGCNA
PCA
WGCNA
EIGENGENE
18 days ago by
rajasekargutha
▴ 60
20
votes
15
replies
12k
views
6 follow
pca analysis for differential gene expression data of microarray samples of similar condition
RNA-Seq
next-gen
R
sequencing
genome
updated 5.4 years ago by
Renesh
★ 2.2k • written 7.5 years ago by
rajasekargutha
▴ 60
1
vote
2
replies
3.7k
views
Is it possible to combine micro array data and RNA-Seq data and perform meta analysis for differential gene expression analysis.
RNA-Seq
next-gen
R
gene
ChIP-Seq
updated 6.1 years ago by
oneillkza
▴ 110 • written 7.1 years ago by
rajasekargutha
▴ 60
0
votes
6
replies
1.5k
views
using of Rankprod to combine two different data sets with different affy platform numbers
genome
R
next-gen
RNA-Seq
gene
6.4 years ago by
rajasekargutha
▴ 60
2
votes
21
replies
3.2k
views
is there any online tool to know which transcription factors ( TFs) bind to the regulatory regions of a list of genes in zebrafish?
RNA-Seq
genome
next-gen
gene
blast
updated 6.5 years ago by
Alex Reynolds
35k • written 6.5 years ago by
rajasekargutha
▴ 60
7
votes
4
replies
12k
views
node degree in cytoscape to find hub proteins
RNA-Seq
genome
next-gen
sequencing
gene
updated 6.5 years ago by
Diwan
▴ 650 • written 6.5 years ago by
rajasekargutha
▴ 60
0
votes
0
replies
2.0k
views
How to create protein protein interaction network from HPRD database
genome
next-gen
RNA-Seq
gene
ChIP-Seq
6.5 years ago by
rajasekargutha
▴ 60
0
votes
0
replies
1.3k
views
Diseasome construction using Human Protein Reference Database
RNA-Seq
genome
next-gen
gene
ChIP-Seq
6.5 years ago by
rajasekargutha
▴ 60
3
votes
3
replies
3.1k
views
NGS DATA ANALYSIS
RNA-Seq
next-gen
ChIP-Seq
rna-seq
updated 6.6 years ago by
django.waddle
▴ 60 • written 6.6 years ago by
rajasekargutha
▴ 60
0
votes
12
replies
1.5k
views
accession date of microarray platform
RNA-Seq
genome
next-gen
gene
blast
updated 6.8 years ago by
theobroma22
★ 1.2k • written 6.8 years ago by
rajasekargutha
▴ 60
1
vote
5
replies
2.6k
views
how to know the putative function of a gene
RNA-Seq
ChIP-Seq
genome
next-gen
gene
updated 6.8 years ago by
Alex Reynolds
35k • written 6.8 years ago by
rajasekargutha
▴ 60
1
vote
4
replies
1.6k
views
Lemon-Tree algorithms for identification of regulatory genes
ChIP-Seq
RNA-Seq
R
next-gen
genome
updated 6.8 years ago by
Biostar
20 • written 7.0 years ago by
rajasekargutha
▴ 60
0
votes
3
replies
2.0k
views
how to use singular value detection for identification of modules in wgcna
RNA-Seq
ChIP-Seq
SNP
R
next-gen
updated 7.4 years ago by
Jean-Karim Heriche
27k • written 7.4 years ago by
rajasekargutha
▴ 60
0
votes
4
replies
2.5k
views
how to get transcription factors for my gene list
RNA-Seq
genome
next-gen
gene
blast
updated 7.4 years ago by
Biostar
20 • written 7.5 years ago by
rajasekargutha
▴ 60
1
vote
0
replies
1.7k
views
how to make gene summary data file traits data file for WGCNA analysis
RNA-Seq
ChIP-Seq
genome
next-gen
gene
7.4 years ago by
rajasekargutha
▴ 60
0
votes
0
replies
2.7k
views
how to plot heatmap for modules in wgcna
RNA-Seq
SNP
ChIP-Seq
genome
next-gen
7.4 years ago by
rajasekargutha
▴ 60
2
votes
11
replies
2.8k
views
Cytoscap-BINGO App for zebrafish data
RNA-Seq
ChIP-Seq
SNP
rna-seq
genome
updated 7.4 years ago by
Chirag Parsania
★ 2.0k • written 7.5 years ago by
rajasekargutha
▴ 60
4
votes
2
replies
2.4k
views
how to perform pairwise correlation coefficent in r program for gene expression matrix
RNA-Seq
ChIP-Seq
R
genome
next-gen
updated 7.5 years ago by
Chirag Parsania
★ 2.0k • written 7.5 years ago by
rajasekargutha
▴ 60
6
votes
6
replies
2.0k
views
identification of miRNA for zebrafish genes
RNA-Seq
SNP
genome
next-gen
updated 7.5 years ago by
Chirag Nepal
★ 2.4k • written 7.5 years ago by
rajasekargutha
▴ 60
3
votes
9
replies
1.5k
views
agilent platform for zebrafish annotation
RNA-Seq
gene
ChIP-Seq
next-gen
genome
updated 7.5 years ago by
Biostar
20 • written 7.6 years ago by
rajasekargutha
▴ 60
1
vote
2
replies
1.9k
views
differential gene expression analysis
RNA-Seq
rna-seq
genome
next-gen
7.5 years ago by
rajasekargutha
▴ 60
0
votes
0
replies
1.8k
views
pareto scaling of rma nomalised graph
RNA-Seq
next-gen
ChIP-Seq
7.5 years ago by
rajasekargutha
▴ 60
2
votes
6
replies
4.5k
views
pareto scaling of RMA normalised values for Principle component analysis (PCA)
RNA-Seq
R
ChIP-Seq
next-gen
genome
updated 7.5 years ago by
Mikael Huss
4.8k • written 7.5 years ago by
rajasekargutha
▴ 60
0
votes
0
replies
2.4k
views
wgcna trait file
RNA-Seq
next-gen
rna-seq
ChIP-Seq
updated 7.8 years ago by
Biostar
20 • written 8.0 years ago by
rajasekargutha
▴ 60
0
votes
7
replies
2.1k
views
wgcna trait file for affymetrix cel files
RNA-Seq
updated 8.0 years ago by
WouterDeCoster
47k • written 8.0 years ago by
rajasekargutha
▴ 60
3
votes
6
replies
1.8k
views
wgcna analysis on cel files
RNA-Seq
8.0 years ago by
rajasekargutha
▴ 60
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